Instruct-HiLIFE CryoEM core facility

Research output

Research output per year 2003 2008 2013 2017 2019 2020 2024 2024

• 31 Article
• 3 Review Article
• 1 Poster

Research output per year

Research output per year

Search results

• 2024

  Antiviral action of a functionalized plastic surface against human coronaviruses

  Shroff, S., Haapakoski, M., Tapio, K., Laajala, M., Leppänen, M., Plavec, Z., Haapala, A., Butcher, S., ihalainen, J., Toppari, J. & Marjomäki, V., 16 Jan 2024, In: Microbiology Spectrum. 12, 2, 24 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Community recommendations on cryoEM data archiving and validation

  Kleywegt, G. J., Adams, P. D., Butcher, S. J., Lawson, C., Rohou, A., Rosenthal, P. B., Subramaniam, S., Topf, M., Abbott, S., Baldwin, P. R., Berrisford, J. M., Bricogne, G., Choudhary, P., Croll, T. I., Danev, R., Ganesan, S. J., Grant, T., Gutmanas, A., Henderson, R., Heymann, J. B., & 27 othersHuiskonen, J. T., Istrate, A., Kato, T., Lander, G. C., Lok, S-M., Ludtke, S. J., Murshudov, G. N., Pye, R., Pintilie, G. D., Richardson, J. S., Sachse, C., Salih, O., Scheres, S. H. W., Schroeder, G. F., Sorzano, C. O. S., Stagg, S. M., Wang, Z., Warshamanage, R., Westbrook, J. D., Winn, M. D., Young, J. Y., Burley, S. K., Hoch, J. C., Kurisu, G., Morris, K., Patwardhan, A. & Velankar, S., Mar 2024, In: IUCrJ. . 11, Part 2

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• VitroJet: new features and case studies

  Henderikx, R. JM., Mann, D., Domanska, A., Dong, J., Shahzad, S., Lak, B., Filopoulou, A., Ludig, D., Grininger, M., Momoh, J., Laanto, E., Oksanen, H. M., Bisikalo, K., Williams, P. A., Butcher, S., Peters, P. J. & Beulen, B. W. A. M. M., 2024, In: Acta crystallographica. Section D, Structural biology. 80, 4, p. 232-246 15 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File
• 2021

  Identification of a conserved virion-stabilizing network inside the interprotomer pocket of enteroviruses

  Flatt, J., Domanska, A., Seppälä, A. L. & Butcher, S., 26 Feb 2021, In: Communications Biology. 4, 8 p., 250.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File
• 2020

  Advances in high‑throughput methods for the identification of virus receptors

  Barrass, S. & Butcher, S., 2020, In: Medical Microbiology and Immunology. 209, p. 309-323 15 p.

  Research output: Contribution to journal › Review Article › peer-review

  Open Access

  File

• Colloidal features of softwood galactoglucomannans-rich extract

  Bhattarai, M., Sulaeva, I., Pitkänen, L., Kontro, I., Tenkanen, M., Potthast, A. & Mikkonen, K. S., 1 Aug 2020, In: Carbohydrate Polymers. 241, 10 p., 116368.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Extracellular vesicles provide a capsid-free vector for oncolytic adenoviral DNA delivery

  Saari, H., Turunen, T., Lohmus, A., Turunen, M., Jalasvuori, M., Butcher, S. J., Yla-Herttuala, S., Viitala, T., Cerullo, V., Siljander, P. R. M. & Yliperttula, M., 1 Jan 2020, In: Journal of Extracellular Vesicles. 9, 1, 24 p., 1747206.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Structure of Nora virus at 2.7 Å resolution and implications for receptor binding, capsid stability and taxonomy.

  Laurinmaki, P., Shakeel, S., Ekström, J-O., Mohammadi, P., Hultmark, D. & Butcher, S., 12 Nov 2020, In: Scientific Reports. 10, 1, 11 p., 19675.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Time-dependent self-association of spruce galactoglucomannans depends on pH and mechanical shearing

  Bhattarai, M., Valoppi, F., Hirvonen, S-P., Hietala, S., Kilpelainen, P., Aseyev, V. & Mikkonen, K. S., May 2020, In: Food Hydrocolloids. 102, 12 p., 105607.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File
• 2019

  A 2.8-Angstrom-Resolution Cryo-Electron Microscopy Structure of Human Parechovirus 3 in Complex with Fab from a Neutralizing Antibody

  Domanska, A., Flatt, J. W., Jukonen, J., Geraets, J. & Butcher, S. J., Feb 2019, In: Journal of Virology. 93, 4, 12 p., e01597-18.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• A novel druggable interprotomer pocket in the capsid of rhino- and enteroviruses

  Abdelnabi, R., Geraets, J. A., Ma, Y., Mirabelli, C., Flatt, J. W., Domanska, A., Delang, L., Jochmans, D., Kumar, T. A., Jayaprakash, V., Sinha, B. N., Leyssen, P., Butcher, S. J. & Neyts, J., Jun 2019, In: PLoS Biology. 17, 6, 17 p., 3000281.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Extracellular Albumin and Endosomal Ions Prime Enterovirus Particles for Uncoating That Can Be Prevented by Fatty Acid Saturation

  Ruokolainen, V., Domanska, A., Laajala, M., Palliccia, M., Butcher, S. & Marjomäki, V., Sept 2019, In: Journal of Virology. 93, 17, 19 p., e00599-19.

  Research output: Contribution to journal › Article › Scientific › peer-review

• The structure of a prokaryotic viral envelope protein expands the landscape of membrane fusion proteins

  El Omari, K., Li, S., Kotecha, A., Walter, T. S., Bignon, E., Harlos, K., Somerharju, P., Haas, F. D., Clare, D., Molin, M., Hurtado, F., Li, M., Grimes, J. M., Bamford, D. H., Tischler, N. D., Huiskonen, J. T., Stuart, D. I. & Roine, E., 19 Feb 2019, In: Nature Communications. 10, 11 p., 846.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File
• 2017

  Genomic RNA folding mediates assembly of human parechovirus

  Shakeel, S., Dykeman, E. C., White, S. J., Ora, A., Cockburn, J., Butcher, S. J., Stockley, P. G. & Twarock, R., 23 Feb 2017, In: Nature Communications. 8, 5, 11 p., 5.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Human picornaviruses associated with neurological diseases and their neutralization by antibodies

  Anastasina, M., Domanska, A., Palm, K. & Butcher, S. J., Jun 2017, In: Journal of General Virology. 98, 6, p. 1145-1158 14 p.

  Research output: Contribution to journal › Review Article › peer-review

  Open Access

  File

• Structural insights into phosphoprotein chaperoning of nucleoprotein in measles virus

  Guryanov, S., Liljeroos, L. J. P., Kasaragod, P., Kajander, T. A. & Butcher, S. J., 2017, p. 46. 1 p.

  Research output: Conference materials › Poster

  File
• 2016

  Multiple capsid-stabilizing interactions revealed in a high-resolution structure of an emerging picornavirus causing neonatal sepsis

  Shakeel, S., Westerhuis, B. M., Domanska, A., Koning, R. I., Matadeen, R., Koster, A. J., Bakker, A. Q., Beaumont, T., Wolthers, K. C. & Butcher, S. J., 20 Jul 2016, In: Nature Communications. 7, 8 p., 11387.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File
• 2014

  Combined approaches to flexible fitting and assessment in virus capsids undergoing conformational change

  Pandurangan, A. P., Shakeel, S., Butcher, S. J. & Topf, M., 2014, In: Journal of Structural Biology. 185, 3, p. 427-439 13 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Hydrophobin Film Structure for HFBI and HFBII and Mechanism for Accelerated Film Formation

  Magarkar, A., Mele, N., Abdel-Rahman, N., Butcher, S., Torkkeli, M., Serimaa, R., Paananen, A., Linder, M. & Bunker, A., Jul 2014, In: PLoS Computational Biology. 10, 7, 13 p., 1003745.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File
• 2013

  Architecture of respiratory syncytial virus revealed by electron cryotomography

  Liljeroos, L., Krzyzaniak, M. A., Helenius, A. & Butcher, S. J., 2 Jul 2013, In: Proceedings of the National Academy of Sciences of the United States of America. 110, 27, p. 11133-11138 6 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• Colloidal properties and gelation of aqueous dispersions of conductive poly(benzimidazobenzophenanthroline) derivatives

  Hirvonen, S-P., Karesoja, M., Karjalainen, E., Hietala, S., Laurinmäki, P., Vesanen, E., Butcher, S. J. & Tenhu, H., 24 Jan 2013, In: Polymer. 54, 2, p. 694-701 8 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• Diblock copolymers consisting of a polymerized ionic liquid and poly(N-isopropylacrylamide). Effects of PNIPAM block length and counter ion on self-assembling and thermal properties

  Karjalainen, E., Chenna, N., Laurinmäki, P., Butcher, S. J. & Tenhu, H., 2013, In: Polymer Chemistry. 2013, 4, p. 1014-1024 11 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• Matrix proteins as centralized organizers of negative-sense RNA virions

  Liljeroos, L. & Butcher, S. J., 2013, In: Frontiers in Bioscience. 18, p. 696-715 20 p.

  Research output: Contribution to journal › Review Article › peer-review

• Nanostructured Aqueous Dispersions of Citrem Interacting with Lipids and PEGylated Lipids

  Fogh Hedegaard, S., Nilsson, C., Laurinmäki, P., Butcher, S., Urtti, A. & Yaghmur, A., 2013, In: RSC Advances. 3, 46, p. 24576-24585 10 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• SPECT/CT imaging of radiolabeled cubosomes and hexosomes for potential theranostic applications

  Nilsson, C., Barrios-Lopez, B., Kallinen, A., Laurinmäki, P., Butcher, S. J., Raki, M., Weisell, J., Bergström, K., Larsen, S. W., Ostergaard, J., Larsen, C., Urtti, A., Airaksinen, A. J. & Yaghmur, A., Nov 2013, In: Biomaterials. 34, 33, p. 8491-8503 13 p.

  Research output: Contribution to journal › Article › Scientific › peer-review
• 2012

  Characterization of the Genome, Proteome, and Structure of Yersiniophage phi R1-37

  Skurnik, M., Hyytiäinen, H., Happonen, L. J., Kiljunen, S., Datta, N., Mattinen, L., Williamson, K., Kristo, P., Szeliga, M., Kalin-Mänttäri, L., Ahola-Iivarinen, E., Kalkkinen, N. & Butcher, S. J., 1 Dec 2012, In: Journal of Virology. 86, 23, p. 12625-12642 18 p.

  Research output: Contribution to journal › Article › Scientific › peer-review
• 2011

  Electron cryotomography of measles virus reveals how matrix protein coats the ribonucleocapsid within intact virions

  Liljeroos, L., Huiskonen, J. T., Ora, A., Susi, P. & Butcher, S. J., 2011, In: Proceedings of the National Academy of Sciences of the United States of America. 108, 44, p. 18085-18090 6 p.

  Research output: Contribution to journal › Article › Scientific › peer-review
• 2010

  Electron Cryotomography of Tula Hantavirus Suggests a Unique Assembly Paradigm for Enveloped Viruses

  Huiskonen, J. T., Hepojoki, J., Laurinmaki, P., Vaheri, A., Lankinen, H., Butcher, S. J. & Gruenewald, K., 2010, In: Journal of Virology. 84, 10, p. 4889-4897 9 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• Familial Relationships in Hyperthermo- and Acidophilic Archaeal Viruses

  Happonen, L. J., Redder, P., Peng, X., Reigstad, L. J., Prangishvili, D. & Butcher, S. J., 2010, In: Journal of Virology. 84, 9, p. 4747-4754 8 p.

  Research output: Contribution to journal › Article › Scientific › peer-review
• 2009

  Structure of chlorosomes from the green filamentous bacterium Chloroflexus aurantiacus

  Psencik, J., Collins, A. M., Liljeroos, L., Torkkeli, H. M., Laurinmäki, P., Ansink, H. M., Ikonen, T., Serimaa, R., Blankenship, R. E., Tuma, R. & Butcher, S. J., 2009, In: Journal of Bacteriology. 191, 21, p. 6701-6708 8 p.

  Research output: Contribution to journal › Article › Scientific › peer-review
• 2008

  Biochemical and structural characterisation of membrane-containing icosahedral dsDNA bacteriophages infecting thermophilic Thermus thermophilus

  Jaatinen, S., Happonen, L. J., Laurinmäki, P., Butcher, S. J. & Bamford, D. H., 2008, In: Virology. 379, 1, p. 10-19 10 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• Effect of the Number of Arms on the Association of Amphiphilic Star Block Copolymers.

  Strandman, S., Zarembo, A., Darinskii, A. A., Laurinmäki, P., Butcher, S. J., Vuorimaa, E., Lemmetyinen, H. & Tenhu, H., 2008, In: Macromolecules. 41, 22, p. 8855-8864 10 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• Hexanol-induced order-disorder transitions in lamellar self-assembling aggregates of bacteriochlorophyll c in Chlorobium tepidum chlorosomes

  Arellano, J. B., Torkkeli, M., Tuma, R., Laurinmäki, P., Melø, T. B., Ikonen, T. P., Butcher, S. J., Serimaa, R. E. & Psencik, J., 2008, In: Langmuir. 24, 5, p. 2035-2041 7 p.

  Research output: Contribution to journal › Article › Scientific › peer-review
• 2007

  Self-assembling of star-like amphiphilic block copolymers with polyelectrolyte blocks: effect of pH

  Strandman, S., Zarembo, A., Darinskii, A. A., Löflund, B., Butcher, S. J. & Tenhu, H., 2007, In: Polymer. 48, 24, p. 7008-7016 9 p.

  Research output: Contribution to journal › Article › Scientific › peer-review
• 2003

  Cleavage leads to expansion of bacteriophage P4 procapsids in vitro

  Wang, S. F., Chandramouli, P., Butcher, S. & Dokland, T., 2003, In: Virology. 314, p. 1-8 8 p.

  Research output: Contribution to journal › Article › Scientific › peer-review