Projects per year
Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
Profiles
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Tero Aittokallio
- Helsinki Institute for Information Technology
- Institute for Molecular Medicine Finland - Senior Researcher
- Doctoral Programme in Biomedicine - Supervisor for doctoral programme
- Doctoral Programme in Clinical Research - Supervisor for doctoral programme
- Doctoral Programme in Drug Research - Supervisor for doctoral programme
- Doctoral Programme in Integrative Life Science - Supervisor for doctoral programme
- Bioinformatics
Person: U3 Research and teaching staff, UH
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Sampsa Hautaniemi
- Department of Biochemistry and Developmental Biology - Professor
- Faculty Common Matters (Faculty of Medicine) - Title of Docent
- Doctoral Programme in Biomedicine - Supervisor for doctoral programme
- Doctoral Programme in Clinical Research - Supervisor for doctoral programme
- Doctoral Programme in Integrative Life Science - Supervisor for doctoral programme
- Sampsa Hautaniemi / Principal Investigator
- Bioinformatics
Person: UH , U4 Research and teaching staff
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Liisa Holm
- Organismal and Evolutionary Biology Research Programme - Professor
- Institute of Biotechnology
- Doctoral Programme in Integrative Life Science - Supervisor for doctoral programme
- Bioinformatics
- Computational genomics
Person: UH , U4 Research and teaching staff
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Ari Löytynoja
- Department of Computer Science - University Researcher
- Doctoral Programme in Integrative Life Science - Supervisor for doctoral programme
- Bioinformatics
Person: U3 Research and teaching staff, UH
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DECIDER: DECIDER (Clinical Decision via Integrating Multiple Data Levels to Overcome Chemotherapy Resistance in High-Grade Serous Ovarian Cancer)
Korpisaari (ex. Tiilikka), P. (Principal Investigator), Hautaniemi, S. (Project manager) & Mansnérus, J. (Other)
01/02/2021 → 31/01/2026
Project: Research project
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Suomalais-Ugrilainen muinaisgenomi
Onkamo, P. (Project manager), Oikkonen, J. (Participant), Översti, S. (Participant), Salmela, E. (Participant), Salo, K. H. (Participant), Nordqvist, K. (Participant) & Junno, A. (Participant)
Koneen Säätiö, Jane and Aatos Erkko Foundation
01/01/2016 → …
Project: Research project
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Elucidation of mechanisms of action of the natural stilbenoid pinosylvin via network pharmacology computational methods
Kibble, M. M. (Project manager), Aittokallio, T. (Principal Investigator), Mäkelä, S. (Principal Investigator), Saarinen, N. (Participant) & Martinez Chacon , G. (Participant)
01/01/2014 → …
Project: Research project
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Gene-culture evolution in music
Ukkola-Vuoti, L. (Participant), Oikkonen, J. (Participant), Onkamo, P. (Participant), Raijas, P. (Participant) & Karma, K. (Participant)
01/04/2002 → …
Project: Research project
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HiLIFE Grand Challenge: Combatting Antimicrobial Drug Resistance
Virta, M. (Project manager) & Holm, L. (Participant)
01/10/2018 → 31/12/2021
Project: Research project
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Practical Colinear Chaining on Sequences Revisited
Rizzo, N., Cáceres, M. & Mäkinen, V., 2026, Bioinformatics Research And Applications, Isbra 2025, Pt Ii. Tang, J., Lai, X., Cai, Z., Peng, W. & Wei, Y. (eds.). Springer Science and Business Media Deutschland GmbH, Vol. 15757. p. 203-216 14 p. (Lecture Notes in Computer Science; vol. 15757 LNBI).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
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3-D substructure search by transitive closure in AlphaFold database
Liu, H., Laiho, A., Törönen, P. & Holm, L., 22 May 2025, In: Protein Science. 34, 6, 12 p., e70169.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Advancements in Rational Multi-Targeted Drug Discovery: Improving the Efficacy-Safety Balance of Small Molecule Cancer Therapeutics
Ravikumar, B., Cichońska, A., Sahni, N., Aittokallio, T. & Rahman, R., 1 Jan 2025, Polypharmacology: Strategies for Multi-Target Drug Discovery. Peters, J.-U. (ed.). Hoboken, New Jersey: Wiley, p. 109-125 17 p.Research output: Chapter in Book/Report/Conference proceeding › Chapter › Scientific › peer-review
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AI Models in Cancer Diagnosis and Prognosis
Filos, D., Sykiotis, S., Tzortzis, I., Rallis, I., Doulamis, A., Doulamis, N., de Almeida, J. G., Rodrigues, N., Rodrigues, A. C., Papanikolaou, N., Loncar-Turukalo, T., Jakovljevic, N., Lazic, I., Rapaic, M., Hautaniemi, S., Caudai, C., Del Corso, G., Germanese, D., Pachetti, E. & Pascali, M. A. & 2 others, , 1 Jan 2025, Trustworthy AI in Cancer Imaging Research. Chouvarda, I., Colantonio, S., Tsakou, G. & Yang, G. (eds.). Springer Science + Business Media, p. 145-168 24 p.Research output: Chapter in Book/Report/Conference proceeding › Chapter › Scientific › peer-review
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Algorithms and Graph Structures for Splitting Network Flows, in Theory and Practice
Grigorjew, A., 2025, Helsinki: University of Helsinki.Research output: Thesis › Doctoral Thesis › Collection of Articles
Open Access
Activities
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Genome Research (Journal)
Mäkinen, V. (Reviewer)
Apr 2025Activity: Publication peer-review and editorial work types › Peer review of manuscripts
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ISMB/ECCB 2025 (Event)
Mäkinen, V. (Programme Committee Member)
Feb 2025Activity: Publication peer-review and editorial work types › Peer review of manuscripts
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Andrea Cracco
Tomescu, A. (Host)
30 Jul 2025 → 30 Aug 2025Activity: Hosting a visitor types › Academic visit at UH
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Pierre Peterlongo
Tomescu, A. (Host)
17 Aug 2025 → 23 Aug 2025Activity: Hosting a visitor types › Academic visit at UH
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Potilas-tutkijatapaaminen, munasarjasyöpä
Liljeström, M. (Participant), Färkkilä, A. (Participant), Hautaniemi, S. (Participant), Chernenko, A. (Participant), Lehtonen, J. O. (Participant), Salloum, S. (Participant), Eriksson, M. (Participant), Junquera Mencía, A. (Participant), Nagaraj, A. (Participant) & Ahlnäs, K. (Participant)
7 May 2024Activity: Other activity types › Other
Prizes
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Alberto Apostolico Best Paper Award
Puglisi, S. (Recipient), Raman, R. (Recipient), Belazzougui, D. (Recipient) & Kosolobov, D. (Recipient), 6 Jul 2021
Prize: Prizes and awards
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Environmental Award
Löytynoja, A. (Recipient), Pohjoismäki, J. (Recipient), Valtonen, M. (Recipient), Laakkonen, J. (Recipient), Morita, W. (Recipient), Kunnasranta, M. (Recipient), Väinölä, R. (Recipient), Olsen, M. T. (Recipient), Auvinen, P. (Recipient) & Jernvall, J. (Recipient), 2025
Prize: Prizes and awards
Press/Media
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University of Helsinki: Researchers Identified Factors That Turn Normal Cells Into Liver Cancer Cells
08/09/2021
1 item of Media coverage
Press/Media: Press / Media
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388123-2021: Finland-Helsingin yliopisto: Services provided by medical laboratories
30/07/2021
1 item of Media coverage
Press/Media: Press / Media
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118211-2021: Finland-Helsinki: Services provided by medical laboratories
09/03/2021
1 item of Media coverage
Press/Media: Press / Media
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Tender Notice: HELSINGIN YLIOPISTO Seeks "Next Generation Sequencing Services for Decider" (118211-2021)
09/03/2021
1 item of Media coverage
Press/Media: Press / Media
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Next Generation Sequencing Services for Decider
09/03/2021
1 item of Media coverage
Press/Media: Press / Media