Projects per year
Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
Profiles
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Tero Aittokallio
- Helsinki Institute for Information Technology
- Institute for Molecular Medicine Finland - Senior Researcher
- Bioinformatics
Person: U3 Research and teaching staff, UH
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Sampsa Hautaniemi
- Department of Biochemistry and Developmental Biology - Professor
- Faculty Common Matters (Faculty of Medicine) - Title of Docent
- Sampsa Hautaniemi / Principal Investigator
- Bioinformatics
Person: UH , U4 Research and teaching staff
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Liisa Holm
- Department of Organismal and Evolutionary Biology - Professor
- Institute of Biotechnology
- Bioinformatics
- Computational genomics
Person: UH , U4 Research and teaching staff
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Ari Löytynoja
- Department of Computer Science - University Researcher
- Faculty Common Matters (Faculty of Biology and Environmental Sciences) - Title of Docent
- Bioinformatics
Person: U3 Research and teaching staff, UH
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Suomalais-Ugrilainen muinaisgenomi
Onkamo, P. (Project manager), Oikkonen, J. (Participant), Översti, S. (Participant), Salmela, E. (Participant), Salo, K. H. (Participant), Nordqvist, K. (Participant) & Junno, A. (Participant)
Koneen Säätiö, Jane and Aatos Erkko Foundation
01/01/2016 → …
Project: Research project
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Elucidation of mechanisms of action of the natural stilbenoid pinosylvin via network pharmacology computational methods
Kibble, M. M. (Project manager), Aittokallio, T. (Principal Investigator), Mäkelä, S. (Principal Investigator), Saarinen, N. (Participant) & Martinez Chacon , G. (Participant)
01/01/2014 → …
Project: Research project
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Gene-culture evolution in music
Ukkola-Vuoti, L. (Participant), Oikkonen, J. (Participant), Onkamo, P. (Participant), Raijas, P. (Participant) & Karma, K. (Participant)
01/04/2002 → …
Project: Research project
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DECIDER: DECIDER (Clinical Decision via Integrating Multiple Data Levels to Overcome Chemotherapy Resistance in High-Grade Serous Ovarian Cancer)
Korpisaari (ex. Tiilikka), P. (Principal Investigator), Hautaniemi, S. (Project manager) & Mansnérus, J. (Other)
01/02/2021 → 31/01/2026
Project: Research project
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HiLIFE Grand Challenge: Combatting Antimicrobial Drug Resistance
Virta, M. (Project manager) & Holm, L. (Participant)
01/10/2018 → 31/12/2021
Project: Research project
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A host-centric morphological profiling approach to identify repurposed antiviral drugs
Asp, E., Rietdijk, J., Tampere, M., Axelsson, H., Njenda, D., Potdar, S., Kalman, A., Georgieva, P., Lapins, M., Ballante, F., Soler, A., de Kort, M., Aittokallio, T., Zaliani, A., Kuzikov, M., Gribbon, P., Lo, D., Carreras-Puigvert, J., Seashore-Ludlow, B. & Spjuth, O. & 1 others, , 10 Jul 2026, In: iScience. 29, 8, 19 p., 116673.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
A multi-center study on the consistency of drug sensitivity testing in patients with acute myeloid leukemia
Willoch-Allen, K., Zhao, Z. B., Ayuda-Durán, P., Mikaeloff, F., Struyf, N., Österroos, A., Lehmann, S., Kallioniemi, O.-P., Saarela, J. S., Tyner, J. W., Erkers, T., Enserink, J. M. & Aittokallio, T. A., 14 May 2026, In: npj precision oncology. 10Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
A standardized pan-cancer framework for spatial profiling of the tumor microenvironment using multiplex immunofluorescence.
van der Zande, S., Hasu, O. H., He, Z., Välimäki, K. E., Mirtti, T., Rannikko, A. S., Lassus, H. J., Ristimäki, A. P., Österlund, P., Aittokallio, T. A., Paavolainen, L., Loukovaara, M. J., Kallioniemi, O. P., Bützow, R. C. & Pellinen, T. S., 3 Apr 2026, In: Cancer Research. 86, 7, 1 p., 792.Research output: Contribution to journal › Meeting Abstract › peer-review
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Biological Features Associated with Poor Response to Neoadjuvant Chemotherapy in High-Grade Serous Ovarian Carcinoma
Rajavuori, A., Li, Y., Isoviita, V.-M., Afenteva, D., Vanhatalo, J., Aakula, M., Nguyen, M., Santarelli, M., Micoli, G., Muranen, T. A., Joutsiniemi, T., Schwikowski, B., Virtanen, A., Hautaniemi, S., Oikkonen, J. & Hynninen, J., 8 Aug 2026, (Accepted/In press) In: International Journal of Gynecological Cancer. 104959.Research output: Contribution to journal › Article › Scientific › peer-review
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Community state shifts driven by total carbon availability over resource complexity in a synthetic microbial community
Bischofberger, A. M., Cairns, J., Aapalampi, I.-K., Pausio, S., Lindqvist, M., Mustonen, V. & Hiltunen, T., 29 May 2026, In: ISME communications. 6, 1Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile
Activities
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CPM 2026 (Event)
Mäkinen, V. (Programme Committee Member)
Mar 2026Activity: Publication peer-review and editorial work types › Editor of research journal
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ECCB 2026 (Event)
Mäkinen, V. (Programme Committee Member)
Apr 2026Activity: Publication peer-review and editorial work types › Editor of research journal
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Andrea Lavarone
Tomescu, A. (Host)
9 Feb 2026 → 13 Feb 2026Activity: Hosting a visitor types › Academic visit at UH
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Nathalie Gocht
Mäkinen, V. (Host)
Apr 2026 → Jun 2026Activity: Hosting a visitor types › Academic visit at UH
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IEEE/ACM Transactions on Computational Biology and Bioinformatics (Journal)
Mäkinen, V. (Editor)
2026 → …Activity: Publication peer-review and editorial work types › Editor of research journal
Prizes
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Alberto Apostolico Best Paper Award
Puglisi, S. (Recipient), Raman, R. (Recipient), Belazzougui, D. (Recipient) & Kosolobov, D. (Recipient), 6 Jul 2021
Prize: Prizes and awards
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Environmental Award
Löytynoja, A. (Recipient), Pohjoismäki, J. (Recipient), Valtonen, M. (Recipient), Laakkonen, J. (Recipient), Morita, W. (Recipient), Kunnasranta, M. (Recipient), Väinölä, R. (Recipient), Olsen, M. T. (Recipient), Auvinen, P. (Recipient) & Jernvall, J. (Recipient), 2025
Prize: Prizes and awards
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Press/Media
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University of Helsinki: Researchers Identified Factors That Turn Normal Cells Into Liver Cancer Cells
08/09/2021
1 item of Media coverage
Press/Media: Press / Media
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388123-2021: Finland-Helsingin yliopisto: Services provided by medical laboratories
30/07/2021
1 item of Media coverage
Press/Media: Press / Media
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118211-2021: Finland-Helsinki: Services provided by medical laboratories
09/03/2021
1 item of Media coverage
Press/Media: Press / Media
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Tender Notice: HELSINGIN YLIOPISTO Seeks "Next Generation Sequencing Services for Decider" (118211-2021)
09/03/2021
1 item of Media coverage
Press/Media: Press / Media
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Next Generation Sequencing Services for Decider
09/03/2021
1 item of Media coverage
Press/Media: Press / Media