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New genetic loci link adipose and insulin biology to body fat distribution

Shungin, D., Winkler, T. W., Croteau-Chonka, D. C., Ferreira, T., Lockes, A. E., Maegi, R., Strawbridge, R. J., Pers, T. H., Fischer, K., Justice, A. E., Workalemahu, T., Wu, J. M. W., Buchkovich, M. L., Heard-Costa, N. L., Roman, T. S., Drong, A. W., Song, C., Gustafsson, S., Day, F. R., Esko, T. & 401 others, Fall, T., Kutalik, Z., Luan, J., Randall, J. C., Scherag, A., Vedantam, S., Wood, A. R., Chen, J., Fehrmann, R., Karjalainen, J., Kahali, B., Liu, C-T., Schmidt, E. M., Absher, D., Amin, N., Anderson, D., Beekman, M., Bragg-Gresham, J. L., Buyske, S., Demirkan, A., Ehret, G. B., Feitosa, M. F., Goel, A., Jackson, A. U., Johnson, T., Kleber, M. E., Kristiansson, K., Mangino, M., Leach, I. M., Medina-Gomez, C., Palmer, C. D., Pasko, D., Pechlivaniss, S., Peters, M. J., Prokopenko, I., Stancakova, A., Sung, Y. J., Tanakam, T., Teumer, A., Van Vliet-Ostaptchouk, J. V., Yengo, L., Zhang, W., Albrecht, E., Arnlov, J., Arscott, G. M., Bandinelli, S., Barrett, A., Bellis, C., Bennett, A. J., Berne, C., Blueher, M., Buhringer, S., Bonnet, F., Boettcher, Y., Bruinenberg, M., Carba, D. B., Caspersen, I. H., Clarke, R., Daw, E. W., Deelen, J., Deelman, E., Delgado, G., Doney, A. S. F., Eklund, N., Erdos, M. R., Estrada, K., Eury, E., Friedrichs, N., Garcia, M. E., Giedraitis, V., Gigante, B., Go, A. S., Golay, A., Grallert, H., Grammer, T. B., Graessler, J., Grewal, J., Groves, C. J., Haller, T., Hallmans, G., Hartman, C. A., Hassinen, M., Hayward, C., Heikkila, K., Herzig, K-H., Helmer, Q., Hillege, H. L., Holmen, O., Hunt, S. C., Isaacs, A., Ittermann, T., James, A. L., Johansson, I., Juliusdottir, T., Kalafati, I-P., Kinnunen, L., Koenig, W., Kooner, I. K., Kratzer, W., Lamina, C., Leander, K., Lee, N. R., Lichtner, P., Lind, L., Lindstrom, J., Lobbens, S., Lorentzon, M., Mach, F., Magnusson, P. K. E., Mahajan, A., McArdle, W. L., Menni, C., Merger, S., Mihailov, E., Milani, L., Mills, R., Moayyeri, A., Monda, K. L., Mooijaart, S. P., Muehleisen, T. W., Mulas, A., Mueller, G., Mueller-Nurasyid, M., Nagaraja, R., Nalls, M. A., Narisu, N., Glorioso, N., Nolte, I. M., Olden, M., Rayner, N. W., Renstrom, F., Ried, J. S., Robertson, N. R., Rose, L. M., Sanna, S., Scharnagl, H., Scholtens, S., Sennblad, B., Seufferlein, T., Sitlani, C. M., Smith, A. V., Stirrups, K., Stringham, H. M., Sundstrom, J., Swertz, M. A., Swift, A. J., Syvanen, A-C., Tayo, B. O., Thorand, B., Thorleifsson, G., Tomaschitz, A., Troffa, C., van Oort, F. V. A., Verweij, N., Vonk, J. M., Waite, L. L., Wennauer, R., Wilsgaard, T., Wojczynski, M. K., Wong, A., Zhang, Q., Zhao, J. H., Brennan, E. P., Choi, M., Eriksson, P., Folkersen, L., Franco-Cereceda, A., Gharavi, A. G., Hedman, A. K., Hivert, M-F., Huang, J., Kanoni, S., Karpe, F., Keildson, S., Kiryluk, K., Liang, L., Lifton, R. P., Ma, B., McKnight, A. J., McPherson, R., Metspalu, A., Min, J. L., Moffatt, M. F., Montgomery, G. W., Murabito, J. M., Nicholson, G., Nyholt, D. R., Olsson, C., Perry, J. R. B., Reinmaa, E., Salem, R. M., Sandholm, N., Schadt, E. E., Scott, R. A., Stolk, L., Vallejo, E. E., Westra, H-J., Zondervan, K. T., Amouyel, P., Arveiler, D., Bakker, S. J. L., Beilby, J., Bergman, R. N., Blangero, J., Brown, M. J., Burnier, M., Campbell, H., Chakravarti, A., Chiness, P. S., Claudi-Boehmi, S., Collins, F. S., Crawford, D. C., Danesh, J., de Faire, U., de Geusl, E. J. C., Doerr, M., Erbel, R., Eriksson, J. G., Farrall, M., Ferrannini, E., Ferrieres, J., Forouhi, N. G., Forrester, T., Franco, O. H., Gansevoort, R. T., Gieger, C., Gudnason, V., Haiman, C. A., Harris, T. B., Hattersley, A. T., Heliovaara, M., Hicks, A. A., Hingorani, A. D., Hoffmann, W., Hofman, A., Homuth, G., Humphries, S. E., Hyppoenen, E., Illig, T., Jarvelin, M-R., Johansen, B., Jousilahti, P., Jula, A. M., Kaprio, J., Kee, F., Keinanen-Kiukaanniemi, S. M., Kooner, J. S., Kooperberg, C., Kovacs, P., Kraja, A. T., Kumari, M., Kuulasmaa, K., Kuusisto, J., Lakka, T. A., Langenberg, C., Le Marchand, L., Lehtimaki, T., Lyssenko, V., Mannisto, S., Marette, A., Matise, T. C., McKenzie, C. A., McKnight, B., Musk, A. W., Mohlenkamp, S., Morris, A. D., Nelis, M., Ohlsson, C., Oldehinkel, A. J., Ong, K. K., Palmer, L. J., Penninx, B. W., Peters, A., Pramstaller, P. P., Raitakari, O. T., Rankinen, T., Rao, D. C., Rice, T. K., Ridker, P. M., Ritchie, M. D., Rudan, I., Salomaa, V., Samani, N. J., Saramies, J., Sarzynski, M. A., Schwarz, P. E. H., Shuldiner, A. R., Staessen, J. A., Steinthorsdottir, V., Stolk, R. P., Strauch, K., Toenjes, A., Tremblay, A., Tremoli, E., Vohl, M-C., Voelker, U., Vollenweider, P., Wilson, J. F., Witteman, J. C., Adair, L. S., Bochud, M., Boehm, B. O., Bornstein, S. R., Bouchard, C., Cauchi, S., Caulfield, M. J., Chambers, J. C., Chasman, D. I., Cooper, R. S., Dedoussis, G., Ferrucci, L., Froguel, P., Grabe, H-J., Hamsten, A., Hui, J., Hveem, K., Joeckel, K-H., Kivimaki, M., Kuh, D., Laakso, M., Liu, Y., Maerz, W., Munroe, P. B., Njolstad, I., Oostra, B. A., Palmer, C. N. A., Pedersen, N. L., Perola, M., Perusse, L., Peters, U., Power, C., Quertermous, T., Rauramaa, R., Rivadeneira, F., Saaristo, T. E., Saleheen, D., Sinisalo, J., Slagboom, P. E., Snieder, H., Spector, T. D., Thorsteinsdottir, U. R., Stumvoll, M., Tuomilehto, J., Uitterlinden, A. G., Uusitupa, M., van der Harst, P., Veronesi, G., Walker, M., Wareham, N. J., Watkins, H., Wichmann, H-E., Abecasis, G. R., Assimes, T. L., Berndt, S. I., Boehnkes, M., Borecki, I. B., Deloukas, P., Franke, L., Frayling, T. M., Groop, L. C., Hunter, D. J., Kaplan, R. C., O'Connell, J. R., Qi, L., Schlessinger, D., Strachan, D. P., Stefansson, K., van Dujin, C. M., Willer, C. J., Visscher, P. M., Yang, J., Hirschhorn, J. N., Zillikens, M. C., McCarthy, M. I., Speliotes, E. K., North, K. E., Fox, C. S., Barroso, I., Franks, P. W., Ingelsson, E., Heid, I. M., Loos, R. J. F., Cupples, L. A., Morris, A. P., Lindgren, C. M., Mohlke, K. L., ADIPOGEN Consortium, CARDIOGRAMplusC4D Consortium, CKDGen Consortium, GEFOS Consortium, GENIE Consortium, GLGC, ICBP, Int Endogene Consortium, LifeLines Cohort Study, MAGIC Investigators, MuTHER Consortium, PAGE Consortium, ReproGen Consortium, Lokki, M-L. & Ripatti, S. O., 12 Feb 2015, In : Nature. 518, 7538, p. 187-U378 22 p.

Research output: Contribution to journalArticleScientificpeer-review

New loci for body fat percentage reveal link between adiposity and cardiometabolic disease risk

Lu, Y., Day, F. R., Gustafsson, S., Buchkovich, M. L., Na, J., Bataille, V., Cousminer, D. L., Dastani, Z., Drong, A. W., Esko, T., Evans, D. M., Falchi, M., Feitosa, M. F., Ferreira, T., Hedman, A. K., Haring, R., Hysi, P. G., Iles, M. M., Justice, A. E., Kanoni, S. & 239 others, Lagou, V., Li, R., Li, X., Locke, A., Lu, C., Magi, R., Perry, J. R. B., Pers, T. H., Qi, Q., Sanna, M., Schmidt, E. M., Scott, W. R., Shungin, D., Teumer, A., Vinkhuyzen, A. A. E., Walker, R. W., Westra, H-J., Zhang, M., Zhang, W., Zhao, J. H., Zhu, Z., Afzal, U., Ahluwalia, T. S., Bakker, S. J. L., Bellis, C., Bonnefond, A., Borodulin, K., Buchman, A. S., Cederholm, T., Choh, A. C., Choi, H. J., Curran, J. E., de Groot, L. C. P. G. M., De Jager, P. L., Dhonukshe-Rutten, R. A. M., Enneman, A. W., Eury, E., Evans, D. S., Forsen, T., Friedrich, N., Fumeron, F., Garcia, M. E., Gartner, S., Han, B-G., Havulinna, A. S., Hayward, C., Hernandez, D., Hillege, H., Ittermann, T., Kent, J. W., Kolcic, I., Laatikainen, T., Lahti, J., Leach, I. M., Lee, C. G., Lee, J-Y., Liu, T., Liu, Y., Lobbens, S., Loh, M., Lyytikainen, L-P., Medina-Gomez, C., Michaelsson, K., Nalls, M. A., Nielson, C. M., Oozageer, L., Pascoe, L., Paternoster, L., Polasek, O., Ripatti, S., Sarzynski, M. A., Shin, C. S., Narancic, N. S., Spira, D., Srikanth, P., Steinhagen-Thiessen, E., Sung, Y. J., Swart, K. M. A., Taittonen, L., Tanaka, T., Tikkanen, E., van der Velde, N., van Schoor, N. M., Verweij, N., Wright, A. F., Yu, L., Zmuda, J. M., Pellikka, N., Forrester, T., Grarup, N., Jackson, A. U., Kristiansson, K., Kuulasmaa, T., Kuusisto, J., Lichtner, P., Luan, J., Mahajan, A., Mannisto, S., Palmer, C. D., Ried, J. S., Scott, R. A., Stancakova, A., Wagner, P. J., Demirkan, A., Doring, A., Gudnason, V., Kiel, D. P., Kuhnel, B., Mangino, M., Mcknight, B., Menni, C., O'Connell, J. R., Oostra, B. A., Shuldiner, A. R., Song, K., Vandenput, L., van Duijn, C. M., Vollenweider, P., White, C. C., Boehnke, M., Boettcher, Y., Cooper, R. S., Forouhi, N. G., Gieger, C., Grallert, H., Hingorani, A., Jorgensen, T., Jousilahti, P., Kivimaki, M., Kumari, M., Laakso, M., Langenberg, C., Linneberg, A., Luke, A., Mckenzie, C. A., Palotie, A., Pedersen, O., Peters, A., Strauch, K., Tayo, B. O., Wareham, N. J., Bennett, D. A., Bertram, L., Blangero, J., Bluher, M., Bouchard, C., Campbell, H., Cho, N. H., Cummings, S. R., Czerwinski, S. A., Demuth, I., Eckardt, R., Eriksson, J. G., Ferrucci, L., Franco, O. H., Froguel, P., Gansevoort, R. T., Hansen, T., Harris, T. B., Hastie, N., Heliovaara, M., Hofman, A., Jordan, J. M., Jula, A., Kahonen, M., Kajantie, E., Knekt, P. B., Koskinen, S., Kovacs, P., Lehtimaki, T., Lind, L., Liu, Y., Orwoll, E. S., Osmond, C., Perola, M., Perusse, L., Raitakari, O. T., Rankinen, T., Rao, D. C., Rice, T. K., Rivadeneira, F., Rudan, I., Salomaa, V., Sorensen, T. I. A., Stumvoll, M., Tonjes, A., Towne, B., Tranah, G. J., Tremblay, A., Uitterlinden, A. G., van der Harst, P., Vartiainen, E., Viikari, J. S., Vitart, V., Vohl, M-C., Volzke, H., Walker, M., Wallaschofski, H., Wild, S., Wilson, J. F., Yengo, L., Bishop, D. T., Borecki, I. B., Chambers, J. C., Cupples, L. A., Dehghan, A., Deloukas, P., Fatemifar, G., Fox, C., Furey, T. S., Franke, L., Han, J., Hunter, D. J., Karjalainen, J., Karpe, F., Kaplan, R. C., Kooner, J. S., McCarthy, M. I., Murabito, J. M., Morris, A. P., Bishop, J. A. N., North, K. E., Ohlsson, C., Ong, K. K., Prokopenko, I., Richards, J. B., Schadt, E. E., Spector, T. D., Widen, E., Willer, C. J., Yang, J., Ingelsson, E., Mohlke, K. L., Hirschhorn, J. N., Pospisilik, J. A., Zillikens, M. C., Lindgren, C., Kilpelainen, T. O. & Loos, R. J. F., Feb 2016, In : Nature Communications. 7, 15 p., 10495.

Research output: Contribution to journalArticleScientificpeer-review

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No Association of Coronary Artery Disease with X-Chromosomal Variants in Comprehensive International Meta-Analysis

Loley, C., Alver, M., Assimes, T. L., Bjonnes, A., Goel, A., Gustafsson, S., Hernesniemi, J., Hopewell, J. C., Kanoni, S., Kleber, M. E., Lau, K. W., Lu, Y., Lyytikainen, L-P., Nelson, C. P., Nikpay, M., Qu, L., Salfati, E., Scholz, M., Tukiainen, T., Willenborg, C. & 58 others, Won, H-H., Zeng, L., Zhang, W., Anand, S. S., Beutner, F., Bottinger, E. P., Clarke, R., Dedoussis, G., Do, R., Esko, T., Eskola, M., Farrall, M., Gauguier, D., Giedraitis, V., Granger, C. B., Hall, A. S., Hamsten, A., Hazen, S. L., Huang, J., Kahonen, M., Kyriakou, T., Laaksonen, R., Lind, L., Lindgren, C., Magnusson, P. K. E., Marouli, E., Mihailov, E., Morris, A. P., Nikus, K., Pedersen, N., Rallidis, L., Salomaa, V., Shah, S. H., Stewart, A. F. R., Thompson, J. R., Zalloua, P. A., Chambers, J. C., Collins, R., Ingelsson, E., Iribarren, C., Karhunen, P. J., Kooner, J. S., Lehtimaki, T., Loos, R. J. F., Maerz, W., McPherson, R., Metspalu, A., Reilly, M. P., Ripatti, S., Sanghera, D. K., Thiery, J., Watkins, H., Deloukas, P., Kathiresan, S., Samani, N. J., Schunkert, H., Erdmann, J. & Koenig, I. R., 12 Oct 2016, In : Scientific Reports. 6, 9 p., 35278.

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No genetic evidence of sex-biased dispersal in a lekking bird, the capercaillie (Tetrao urogallus)

Mäki-Petäys, H., Corander, J., Aalto, J., Liukkonen, T., Helle, P. & Orell, M., 2007, In : Journal of Evolutionary Biology. 20, 3, p. 865-873 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Non-stationary Gaussian models with physical barriers

Bakka, H., Vanhatalo, J., Illian, J. B., Simpson, D. & Rue, H., Mar 2019, In : Spatial statistics. 29, p. 268-288 21 p.

Research output: Contribution to journalArticleScientificpeer-review

NordicDB: a Nordic pool and portal for genome-wide control data

Leu, M., Humphreys, K., Surakka, I., Rehnberg, E., Muilu, J., Rosenstrom, P., Almgren, P., Jaaskelainen, J., Lifton, R. P., Kyvik, K. O., Kaprio, J., Pedersen, N. L., Palotie, A., Hall, P., Gronberg, H., Groop, L., Peltonen, L., Palmgren, J. & Ripatti, S., 2010, In : European Journal of Human Genetics. 18, p. 1322-1326 5 p.

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Novel Blood Pressure Locus and Gene Discovery Using Genome-Wide Association Study and Expression Data Sets From Blood and the Kidney

Wain, L. V., Vaez, A., Jansen, R., Joehanes, R., van der Most, P. J., Erzurumluoglu, A. M., O'Reilly, P. F., Cabrera, C. P., Warren, H. R., Rose, L. M., Verwoert, G. C., Hottenga, J-J., Strawbridge, R. J., Esko, T., Arking, D. E., Hwang, S-J., Guo, X., Kutalik, Z., Trompet, S., Shrine, N. & 33 others, Teumer, A., Ried, J. S., Bis, J. C., Smith, A. V., Amin, N., Nolte, I. M., Lyytikainen, L-P., Mahajan, A., Wareham, N. J., Hofer, E., Joshi, P. K., Kristiansson, K., Traglia, M., Havulinna, A. S., Goel, A., Nalls, M. A., Sober, S., Vuckovic, D., Luan, J., Del Greco M, F., Ayers, K. L., Marrugat, J., Ruggiero, D., Lopez, L. M., Niiranen, T., Enroth, S., Palotie, A., Ripatti, S., Sarin, A-P., Perola, M., BIOS Consortium, Lifelines Cohort Study & Understanding Soc Sci Grp, Sep 2017, In : Hypertension. 70, 3, p. E4-+ 49 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access

Novel Loci for Adiponectin Levels and Their Influence on Type 2 Diabetes and Metabolic Traits: A Multi-Ethnic Meta-Analysis of 45,891 Individuals

Dastani, Z., Hivert, M-F., Timpson, N., Perry, J. R. B., Yuan, X., Scott, R. A., Henneman, P., Heid, I. M., Kizer, J. R., Lyytikainen, L-P., Fuchsberger, C., Tanaka, T., Morris, A. P., Small, K., Isaacs, A., Beekman, M., Coassin, S., Lohman, K., Qi, L., Kanoni, S. & 31 others, Pankow, J. S., Uh, H-W., Wu, Y., Bidulescu, A., Rasmussen-Torvik, L. J., Greenwood, C. M. T., Ladouceur, M., Grimsby, J., Manning, A. K., Liu, C-T., Kooner, J., Mooser, V. E., Vollenweider, P., Kapur, K. A., Chambers, J., Wareham, N. J., Langenberg, C., Frants, R., Willems-vanDijk, K., Oostra, B. A., Willems, S. M., Lamina, C., Winkler, T. W., Psaty, B. M., Nuotio, M-L., Perola, M., Eriksson, J. G., GLGC Investigators, DIAGRAM Consortium, MAGIC Consortium, MuTHER Consortium, Ripatti, S., Kaprio, J. & Lokki, M-L., 2012, In : PLoS Genetics. 8, 3, p. e1002607 23 p.

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Novel Loci for Metabolic Networks and Multi-Tissue Expression Studies Reveal Genes for Atherosclerosis

Inouye, M., Ripatti, S., Kettunen, J., Lyytikainen, L-P., Oksala, N., Laurila, P-P., Kangas, A. J., Soininen, P., Savolainen, M. J., Viikari, J., Kahonen, M., Perola, M., Salomaa, V., Raitakari, O., Lehtimaki, T., Taskinen, M-R., Jaervelin, M-R., Ala-Korpela, M., Palotie, A. & de Bakker, P. I. W., 1 Aug 2012, In : PLoS Genetics. 8, 8, p. e1002907

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Novel R Pipeline for Analyzing Biolog Phenotypic Microarray Data

Vehkala, M., Shubin, M., Connor, T. R., Thomson, N. R. & Corander, J., 18 Mar 2015, In : PLoS One. 10, 3, p. 1-14 14 p., 0118392.

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Novel staphylococcal species that form part of a Staphylococcus aureus-related complex: the non-pigmented Staphylococcus argenteus sp nov and the non-human primate-associated Staphylococcus schweitzeri sp nov.

Tong, S. Y. C., Schaumburg, F., Ellington, M. J., Corander, J., Pichon, B., Leendertz, F., Bentley, S. D., Parkhill, J., Holt, D. C., Peters, G. & Giffard, P. M., Jan 2015, In : International Journal of Systematic and Evolutionary Microbiology. 65, p. 15-22 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Obstructive sleep apnoea and the risk for coronary heart disease and type 2 diabetes: a longitudinal population-based study in Finland

Strausz, S., Havulinna, A. S., Tuomi, T., Bachour, A., Groop, L., Mäkitie, A., Koskinen, S., Salomaa, V., Palotie, A., Ripatti, S. & Palotie, T., Oct 2018, In : BMJ Open. 8, 10, 8 p., 022752.

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On the Identifiability of Transmission Dynamic Models for Infectious Diseases

Lintusaari, J., Gutmann, M. U., Kaski, S. & Corander, J., Mar 2016, In : Genetics. 202, 3, p. 911-918 8 p.

Research output: Contribution to journalArticleScientificpeer-review

On the inconsistency of ℓ1-penalised sparse precision matrix estimation

Heinävaara, O., Leppä-Aho, J., Corander, J. & Honkela, A., 13 Dec 2016, In : BMC Bioinformatics. 17, Suppl 16, p. 99-107 9 p.

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On the Outage Capacity of Orthogonal Space-Time Block Codes Over Multi-Cluster Scattering MIMO Channels

Wei, L., Zheng, Z., Corander, J. & Taricco, G., May 2015, In : IEEE Transactions on Communications. 63, 5, p. 1700-1711 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Optimal Viterbi Bayesian Predictive Classification for Data from Finite Alphabets

Corander, J., Xiong, J., Cui, Y. & Koski, T., Feb 2013, In : Journal of Statistical Planning and Inference. 143, 2, p. 261-275 15 p.

Research output: Contribution to journalArticleScientificpeer-review

Orthogonal parallel MCMC methods for sampling and optimization

Martino, L., Elvira, V., Luengo, D., Corander, J. & Louzada, F., Nov 2016, In : Digital Signal Processing. 58, p. 64-84 21 p.

Research output: Contribution to journalArticleScientificpeer-review

Pain in 1,000 women treated for breast cancer: a prospective study of pain sensitivity and postoperative pain

Kaunisto, M., Jokela, R., Tallgren, M., Kambur, O., Tikkanen, E., Tasmuth, T., Reetta, S., Palotie, A., Estlander, A-M., Leidenius, M. H., Ripatti, S. O. & Kalso, E., Dec 2013, In : Anesthesiology. 119, 6, p. 1410-1421 12 p.

Research output: Contribution to journalArticleScientificpeer-review

PANINI: Pangenome Neighbour Identification for Bacterial Populations

Abudahab, K., Prada, J. M., Yang, Z., Bentley, S. D., Croucher, N. J., Corander, J. & Aanensen, D. M., Apr 2019, In : Microbial Genomics. 5, 4, 10 p., 000220.

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Parallel independent evolution of pathogenicity within the genus Yersinia

Reuter, S., Connor, T. R., Barquist, L., Walker, D., Feltwell, T., Harris, S. R., Fookes, M., Hall, M. E., Petty, N. K., Fuchs, T. M., Corander, J., Dufour, M., Ringwood, T., Savin, C., Bouchier, C., Martin, L., Miettinen, M., Shubin, M., Riehm, J. M., Laukkanen-Ninios, R. & 13 others, Sihvonen, L. M., Siitonen, A., Skurnik, M., Falcao, J. P., Fukushima, H., Scholz, H. C., Prentice, M. B., Wren, B. W., Parkhill, J., Carniel, E., Achtman, M., McNally, A. & Thomson, N. R., 6 May 2014, In : Proceedings of the National Academy of Sciences of the United States of America. 111, 18, p. 6768-6773 6 p.

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Parallell interacting MCMC for learning of topologies of graphical models

Corander, J., Ekdahl, M. & Koski, T., 2008, In : Data Mining and Knowledge Discovery. 17, 3, p. 431-456 26 p.

Research output: Contribution to journalArticleScientificpeer-review

Parent-of-origin-specific allelic associations among 106 genomic loci for age at menarche

Perry, J. R. B., Day, F., Elks, C. E., Sulem, P., Thompson, D. J., Ferreira, T., He, C., Chasman, D. I., Esko, T., Thorleifsson, G., Albrecht, E., Ang, W. Q., Corre, T., Cousminer, D. L., Feenstra, B., Franceschini, N., Ganna, A., Johnson, A. D., Kjellqvist, S., Lunetta, K. L. & 35 others, McMahon, G., Nolte, I. M., Paternoster, L., Porcu, E., Smith, A. V., Stolk, L., Teumer, A., Tsernikova, N., Tikkanen, E., Ulivi, S., Wagner, E. K., Amin, N., Bierut, L. J., Byrne, E. M., Hottenga, J-J., Koller, D. L., Mangino, M., Pers, T. H., Yerges-Armstrong, L. M., Zhao, J. H., Andrulis, I. L., Anton-Culver, H., Atsma, F., Bandinelli, S., Blomqvist, C., Eriksson, J. G., Nevanlinna, H., Palotie, A., Widen, E., Australian Ovarian Canc Study, GENICA Network, kConFabt LifeLines Cohort Study, InterAct Consortium, Early Growth Genetics EGG Consorti & Ripatti, S., 2 Oct 2014, In : Nature. 514, 7520, p. 92-+ 17 p.

Research output: Contribution to journalArticleScientificpeer-review

Partial Sleep Restriction Activates Immune Response-Related Gene Expression Pathways: Experimental and Epidemiological Studies in Humans

Aho, V., Ollila, H. M., Rantanen, V., Kronholm, E., Surakka, I., van Leeuwen, W. M. A., Lehto, M., Matikainen, S., Ripatti, S., Harma, M., Sallinen, M., Salomaa, V., Jauhiainen, M., Alenius, H., Paunio, T. & Porkka-Heiskanen, T., 23 Oct 2013, In : PLoS One. 8, 10, 12 p., e77184.

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Patients with rheumatic diseases share similar patterns of healthcare resource utilization

Mars, NJ., Kerola, AM., Kauppi, MJ., Pirinen, M., Elonheimo, O. & Sokka-Isler, T., 4 Jul 2019, In : Scandinavian Journal of Rheumatology. 48, 4, p. 300-307 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Patterns of cross-resistance and collateral sensitivity between clinical antibiotics and natural antimicrobials

Colclough, A., Corander, J., Sheppard, S. K., Bayliss, S. C. & Vos, M., Jun 2019, In : Evolutionary Applications. 12, 5, p. 878-887 10 p.

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Patterns of genome evolution that have accompanied host adaptation in Salmonella

Langridge, G. C., Fookes, M., Connor, T. R., Feltwell, T., Feasey, N., Parsons, B. N., Seth-Smith, H. M. B., Barquist, L., Stedman, A., Humphrey, T., Wigley, P., Peters, S. E., Maskell, D. J., Corander, J., Chabalgoity, J. A., Barrow, P., Parkhill, J., Dougan, G. & Thomson, N. R., 20 Jan 2015, In : Proceedings of the National Academy of Sciences of the United States of America. 112, 3, p. 863-868 6 p.

Research output: Contribution to journalArticleScientificpeer-review

Pharmacogenomics of Hypertension: A Genome-Wide, Placebo-Controlled Cross-Over Study, Using Four Classes of Antihypertensive Drugs

Hiltunen, T. P., Donner, K. M., Sarin, A-P., Saarela, J., Ripatti, S., Chapman, A. B., Gums, J. G., Gong, Y., Cooper-DeHoff, R. M., Frau, F., Glorioso, V., Zaninello, R., Salvi, E., Glorioso, N., Boerwinkle, E., Turner, S. T., Johnson, J. A. & Kontula, K. K., Jan 2015, In : Journal of the American Heart Association. 4, 1, 26 p., 001521.

Research output: Contribution to journalArticleScientificpeer-review

Phenome-wide association studies across large population cohorts support drug target validation

23andMe Res Team, 16 Oct 2018, In : Nature Communications. 9, 13 p., 4285.

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Phenotype mining in CNV carriers from a population cohort

Pietilainen, O. P. H., Rehnstrom, K., Jakkula, E., Service, S. K., Congdon, E., Tilgmann, C., Hartikainen, A-L., Taanila, A., Heikura, U., Paunio, T., Ripatti, S., Jarvelin, M-R., Isohanni, M., Sabatti, C., Palotie, A., Freimer, N. B. & Palotie, L., 2011, In : Human Molecular Genetics. 20, 13, p. 2686-2695 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Phylogeographic variation in recombination rates within a global clone of methicillin-resistant Staphylococcus aureus

Castillo-Ramirez, S., Corander, J., Marttinen, P., Aldeljawi, M., Hanage, W. P., Westh, H., Boye, K., Gulay, Z., Bentley, S. D., Parkhill, J., Holden, M. T. & Feil, E. J., 2012, In : Genome Biology. 13, 12, p. R126 13 p.

Research output: Contribution to journalArticleScientificpeer-review

Plasma HDL cholesterol and risk of myocardial infarction: a mendelian randomisation study

Voight, B. F., Peloso, G. M., Orho-Melander, M., Frikke-Schmidt, R., Barbalic, M., Jensen, M. K., Hindy, G., Holm, H., Ding, E. L., Johnson, T., Schunkert, H., Samani, N. J., Clarke, R., Hopewell, J. C., Thompson, J. F., Li, M., Thorleifsson, G., Newton-Cheh, C., Musunuru, K., Pirruccello, J. P. & 106 others, Saleheen, D., Chen, L., Stewart, A. F. R., Schillert, A., Thorsteinsdottir, U., Thorgeirsson, G., Anand, S., Engert, J. C., Morgan, T., Spertus, J., Stoll, M., Berger, K., Martinelli, N., Girelli, D., McKeown, P. P., Patterson, C. C., Epstein, S. E., Devaney, J., Burnett, M-S., Mooser, V., Ripatti, S., Surakka, I., Nieminen, M. S., Sinisalo, J-P., Lokki, M-L., Perola, M., Havulinna, A., de Faire, U., Gigante, B., Ingelsson, E., Zeller, T., Wild, P., de Bakker, P. I. W., Klungel, O. H., Maitland-van der Zee, A-H., Peters, B. J. M., de Boer, A., Grobbee, D. E., Kamphuisen, P. W., Deneer, V. H. M., Elbers, C. C., Onland-Moret, N. C., Hofker, M. H., Wijmenga, C., Verschuren, W. M. M., Boer, J. M. A., van der Schouw, Y. T., Rasheed, A., Frossard, P., Demissie, S., Willer, C., Do, R., Ordovas, J. M., Abecasis, G. R., Boehnke, M., Mohlke, K. L., Daly, M. J., Guiducci, C., Burtt, N. P., Surti, A., Gonzalez, E., Purcell, S., Gabriel, S., Marrugat, J., Peden, J., Erdmann, J., Diemert, P., Willenborg, C., Koenig, I. R., Fischer, M., Hengstenberg, C., Ziegler, A., Buysschaert, I., Lambrechts, D., Van de Werf, F., Fox, K. A., El Mokhtari, N. E., Rubin, D., Schrezenmeir, J., Schreiber, S., Schaefer, A., Danesh, J., Blankenberg, S., Roberts, R., McPherson, R., Watkins, H., Hall, A. S., Overvad, K., Rimm, E., Boerwinkle, E., Tybjaerg-Hansen, A., Cupples, L. A., Reilly, M. P., Melander, O., Mannucci, P. M., Ardissino, D., Siscovick, D., Elosua, R., Stefansson, K., O'Donnell, C. J., Salomaa, V., Rader, D. J., Palotie, L., Schwartz, S. M., Altshuler, D. & Kathiresan, S., 2012, In : Lancet. 380, 9841, p. 572-580 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Population Biology of Intestinal Enterococcus Isolates from Hospitalized and Nonhospitalized Individuals in Different Age Groups

Tedim, A. P., Ruiz-Garbajosa, P., Corander, J., Rodriguez, C. M., Canton, R., Willems, R. J., Baquero, F. & Coque, T. M., Mar 2015, In : Applied and Environmental Microbiology. 81, 5, p. 1820–1831 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Population structure in the Neisseria, and the biological significance of fuzzy species

Corander, J., Connor, T. R., O'Dwyer, C. A., Kroll, J. S. & Hanage, W. P., 2012, In : Journal of the Royal Society Interface. 9, 71, p. 1208-1215 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Population subdivision and the detection of recombination in non-typable Haemophilus influenzae

Connor, T. R., Corander, J. & Hanage, W. P., Dec 2012, In : Microbiology. 158, no. Pt 12 , p. 2958-2964 7 p.

Research output: Contribution to journalArticleScientificpeer-review

Posterior Predictive Comparisons for the Two-sample Problem

Blomstedt, P. & Corander, J., 2015, In : Communications in Statistics: Theory and Methods. 44, 2, p. 376-389 14 p.

Research output: Contribution to journalArticleScientificpeer-review

Predicting ice-induced load amplitudes on ship bow conditional on ice thickness and ship speed in the Baltic Sea

Kotilainen, M., Vanhatalo, J. P., Suominen, M. & Kujala, P., Mar 2017, In : Cold Regions Science and Technology. 135, p. 116–126 11 p.

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Preparing for the unprecedented - Towards quantitative oil risk assessment in the Arctic marine areas

Nevalainen, M., Helle, I. & Vanhatalo, J., 15 Jan 2017, In : Marine Pollution Bulletin. 114, 1, p. 90-101 12 p.

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Probabilistic Ecosystem Model for Predicting the Nutrient Concentrations in the Gulf of Finland under Diverse Management Actions

Vanhatalo, J., Tuomi, L., Inkala, A., Helle, I. & Pitkänen, H., 2013, In : Environmental Science & Technology. 47, 1, p. 334–341 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Probe Region Expression Estimation for RNA-Seq Data for Improved Microarray Comparability

Uziela, K. & Honkela, A., 12 May 2015, In : PLoS One. 10, 5, 18 p., 0126545.

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Pro-inflammatory fatty acid profile and colorectal cancer risk: A Mendelian randomisation analysis

May-Wilson, S., Sud, A., Law, P. J., Palin, K., Tuupanen, S., Gylfe, A., Hänninen, U. A., Cajuso, T., Tanskanen, T., Kondelin, J., Kaasinen, E., Sarin, A-P., Eriksson, J. G., Rissanen, H., Knekt, P., Pukkala, E., Jousilahti, P., Salomaa, V., Ripatti, S., Palotie, A. & 34 others, Renkonen-Sinisalo, L., Lepisto, A., Böhm, J., Mecklin, J-P., Al-Tassan, N. A., Palles, C., Farrington, S. M., Timofeeva, M. N., Meyer, B. F., Wakil, S. M., Campbell, H., Smith, C. G., Idziaszczyk, S., Maughan, T. S., Fisher, D., Kerr, R., Kerr, D., Passarelli, M. N., Figueiredo, J. C., Buchanan, D. D., Win, A. K., Hopper, J. L., Jenkins, M. A., Lindor, N. M., Newcomb, P. A., Gallinger, S., Conti, D., Schumacher, F., Casey, G., Aaltonen, L. A., Cheadle, J. P., Tomlinson, I. P., Dunlop, M. G. & Houlston, R. S., Oct 2017, In : European Journal of Cancer. 84, p. 228-238 11 p.

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Psychiatric comorbidity in couples: a longitudinal study of 202,959 married and cohabiting individuals

Joutsenniemi, K., Moustgaard, H., Koskinen, S., Ripatti, S. & Martikainen, P., 2011, In : Social Psychiatry and Psychiatric Epidemiology. 46, 7, p. 623-633 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Pubertal Timing and Growth Influences Cardiometabolic Risk Factors in Adult Males and Females

Widen, E., Silventoinen, K., Sovio, U., Ripatti, S., Cousminer, D. L., Hartikainen, A-L., Laitinen, J., Pouta, A., Kaprio, J., Jarvelin, M-R., Peltonen, L. & Palotie, A., 2012, In : Diabetes Care. 35, 4, p. 850-856 7 p.

Research output: Contribution to journalArticleScientificpeer-review

pyseer: a comprehensive tool for microbial pangenome-wide association studies

Lees, J. A., Galardini, M., Bentley, S. D., Weiser, J. N. & Corander, J., 15 Dec 2018, In : Bioinformatics. 34, 24, p. 4310-4312 3 p.

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Quality control and conduct of genome-wide association meta-analyses

Winkler, T. W., Day, F. R., Croteau-Chonka, D. C., Wood, A. R., Locke, A. E., Maegi, R., Ferreira, T., Fall, T., Graff, M., Justice, A. E., Luan, J., Gustafsson, S., Randall, J. C., Vedantam, S., Workalemahu, T., Kilpelainen, T. O., Scherag, A., Esko, T., Kutalik, Z., Heid, I. M. & 8 others, Loos, R. J. F., Genetic Invest Anthropometric Trai, Kaprio, J., Eriksson, J., Ripatti, S., Lokki, M-L., Tuomi, T. & Kivimäki, M., May 2014, In : Nature Protocols. 9, 5, p. 1192-1212 21 p.

Research output: Contribution to journalArticleScientificpeer-review

Quantifying the Impact of Rare and Ultra-rare Coding Variation across the Phenotypic Spectrum

GoT2D T2D-GENES Consortium, SIGMA Consortium Helmsley IBD Exom, FinMetSeq Consortium, iPSYCH-Broad Consortium, Ganna, A., Kurki, M., Havulinna, A. S., Saarentaus, E., Ripatti, S., Hämäläinen, E., Moilanen, J. S., Kuismin, O., Palotie, A. & Neale, B. M., 7 Jun 2018, In : American Journal of Human Genetics. 102, 6, p. 1204-1211 8 p.

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Random partition models and exchangeability for Bayesian identification of population structure

Corander, J., Gyllenberg, M. & Koski, T., 2007, In : Bulletin of Mathematical Biology. 69, 3, p. 797-815 19 p.

Research output: Contribution to journalArticleScientificpeer-review

Rare Functional Variant in TM2D3 is Associated with Late-Onset Alzheimer's Disease

Jakobsdottir, J., van der Lee, S. J., Bis, J. C., Chouraki, V., Li-Kroeger, D., Yamamoto, S., Grove, M. L., Naj, A., Vronskaya, M., Salazar, J. L., DeStefano, A. L., Brody, J. A., Smith, A. V., Amin, N., Sims, R., Ibrahim-Verbaas, C. A., Choi, S-H., Satizabal, C. L., Lopez, O. L., Beiser, A. & 32 others, Ikram, M. A., Garcia, M. E., Hayward, C., Varga, T. V., Ripatti, S., Franks, P. W., Hallmans, G., Rolandsson, O., Jansson, J-H., Porteous, D. J., Salomaa, V., Eiriksdottir, G., Rice, K. M., Bellen, H. J., Levy, D., Uitterlinden, A. G., Emilsson, V., Rotter, J. I., Aspelund, T., O'Donnell, C. J., Fitzpatrick, A. L., Launer, L. J., Hofman, A., Wang, L-S., Williams, J., Schellenberg, G. D., Boerwinkle, E., Psaty, B. M., Seshadri, S., Shulman, J. M., Cohorts Heart Aging Res Genomic Ep & Genetic Environm Risk Alzheimer's, Oct 2016, In : PLoS Genetics. 12, 10, 17 p., 1006327.

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Reappraisal of known malaria resistance loci in a large multicenter study

Rockett, K. A., Clarke, G. M., Fitzpatrick, K., Hubbart, C., Jeffreys, A. E., Rowlands, K., Craik, R., Jallow, M., Conway, D. J., Bojang, K. A., Pinder, M., Usen, S., Sisay-Joof, F., Sirugo, G., Toure, O., Thera, M. A., Konate, S., Sissoko, S., Niangaly, A., Poudiougou, B. & 63 others, Mangano, V. D., Bougouma, E. C., Sirima, S. B., Modiano, D., Amenga-Etego, L. N., Ghansah, A., Koram, K. A., Wilson, M. D., Enimil, A., Evans, J., Amodu, O., Olaniyan, S., Apinjoh, T., Mugri, R., Ndi, A., Ndila, C. M., Uyoga, S., Macharia, A., Peshu, N., Williams, T. N., Manjurano, A., Riley, E., Drakeley, C., Reyburn, H., Nyirongo, V., Kachala, D., Molyneux, M., Dunstan, S. J., Phu, N. H., Quyen, N. T. N., Thai, C. Q., Hien, T. T., Manning, L., Laman, M., Siba, P., Karunajeewa, H., Allen, S., Allen, A., Davis, T. M. E., Michon, P., Mueller, I., Green, A., Molloy, S., Johnson, K. J., Kerasidou, A., Cornelius, V., Hart, L., Vanderwal, A., SanJoaquin, M., Band, G., Le, S. Q., Pirinen, M., Sepulveda, N., Spencer, C. C. A., Clark, T. G., Agbenyega, T., Achidi, E., Doumbo, O., Farrar, J., Marsh, K., Taylor, T., Kwiatkowski, D. P. & Netwo, M. G. E., 1 Nov 2014, In : Nature Genetics. 46, 11, p. 1197-1204 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Recent Recombination Events in the Core Genome Are Associated with Adaptive Evolution in Enterococcus faecium

de Been, M., van Schaik, W., Cheng, L., Corander, J. & Willems, R. J., 2013, In : Genome Biology and Evolution. 5, 8, p. 1524-U1 12 p.

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