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Recombination is a key driver of genomic and phenotypic diversity in a Pseudomonas aeruginosa population during cystic fibrosis infection

Darch, S. E., McNally, A., Harrison, F., Corander, J., Barr, H. L., Paszkiewicz, K., Holden, S., Fogarty, A., Crusz, S. A. & Diggle, S. P., 12 Jan 2015, In : Scientific Reports. 5, 12 p., 7649.

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Reconstructing population histories from single nucleotide polymorphism data

Siren, J., Marttinen, P. & Corander, J., 2011, In : Molecular Biology and Evolution. 28, 1, p. 673-683

Research output: Contribution to journalArticleScientificpeer-review

Recursive learning for sparse Markov models

Xiong, J., Jääskinen, V. & Corander, J., 2016, In : Bayesian analysis. 11, 1, p. 247-263 17 p.

Research output: Contribution to journalArticleScientificpeer-review

Representation transfer for differentially private drug sensitivity prediction

Niinimäki, T., Heikkilä, M. A., Honkela, A. & Kaski, S., 5 Jul 2019, In : Bioinformatics. 35, 14, p. i218-i224 7 p.

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Reproduction areas of sea-spawning coregonids reflect the environment in shallow coastal waters

Veneranta, L., Hudd, R. & Vanhatalo, J., 12 Mar 2013, In : Marine Ecology. Progress Series. 477, p. 231-250 20 p.

Research output: Contribution to journalArticleScientificpeer-review

Re-sequencing Expands Our Understanding of the Phenotypic Impact of Variants at GWAS Loci

Service, S. K., Teslovich, T. M., Fuchsberger, C., Ramensky, V., Yajnik, P., Koboldt, D. C., Larson, D. E., Zhang, Q., Lin, L., Welch, R., Ding, L., McLellan, M. D., O'Laughlin, M., Fronick, C., Fulton, L. L., Magrini, V., Swift, A., Elliott, P., Jarvelin, M-R., Kaakinen, M. & 14 others, McCarthy, M. I., Peltonen, L., Pouta, A., Bonnycastle, L. L., Collins, F. S., Narisu, N., Stringham, H. M., Tuomilehto, J., Ripatti, S., Fulton, R. S., Sabatti, C., Wilson, R. K., Boehnke, M. & Freimer, N. B., Jan 2014, In : PLoS Genetics. 10, 1, 12 p., 1004147.

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Restricted Gene Flow among Hospital Subpopulations of Enterococcus faecium

Willems, R. J. L., Top, J., van Schaik, W., Leavis, H., Bonten, M., Siren, J., Hanage, W. P. & Corander, J., 2012, In : mBio. 3, 4, p. e00151-12 10 p.

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RNA Production Delays Shape Transcriptional Response Dynamics

Honkela, A. J. H. & Rattray, M., 25 May 2016, In : Cell Systems. 2, 5, p. 291 1 p.

Research output: Contribution to journalArticleScientific

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Robust Gaussian Process Regression with a Student-t Likelihood

Jylänki, P., Vanhatalo, J. & Vehtari, A., Nov 2011, In : Journal of Machine Learning Research. 12, p. 3227-3257 31 p.

Research output: Contribution to journalArticleScientificpeer-review

rPinecone: Define sub-lineages of a clonal expansion via a phylogenetic tree

Wailan, A. M., Coll, F., Heinz, E., Tonkin-Hill, G., Corander, J., Feasey, N. A. & Thomson, N. R., Apr 2019, In : Microbial Genomics. 5, 4, 9 p., 000264.

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SAIL-a software system for sample and phenotype availability across biobanks and cohorts

Gostev, M., Fernandez-Banet, J., Rung, J., Dietrich, J., Prokopenko, I., Ripatti, S., McCarthy, M. I., Brazma, A. & Krestyaninova, M., 2011, In : Bioinformatics. 27, 4, p. 589-591 3 p.

Research output: Contribution to journalArticleScientificpeer-review

Seasonal Variation in Genome-Wide DNA Methylation Patterns and the Onset of Seasonal Timing of Reproduction in Great Tits

Viitaniemi, H. M., Verhagen, I., Visser, M. E., Honkela, A., van Oers, K. & Husby, A., Mar 2019, In : Genome Biology and Evolution. 11, 3, p. 970-983 14 p.

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SEK: sparsity exploiting k-mer-based estimation of bacterial community composition

Chatterjee, S., Koslicki, D., Dong, S., Innocenti, N., Cheng, L., Lan, Y., Vehkapera, M., Skoglund, M., Rasmussen, L. K., Aurell, E. & Corander, J., 1 Sep 2014, In : Bioinformatics. 30, 17, p. 2423-2431 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Sepelvaltimotautiriskin arviointi genomitietoa hyödyntämällä

Widén, E. & Ripatti, S., 2017, In : Duodecim. 133, 8, p. 776-781 6 p.

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Sequence analysis of percent G plus C fraction libraries of human faecal bacterial DNA reveals a high number of Actinobacteria

Krogius-Kurikka, L., Kassinen, A., Paulin, L., Corander, J., Mäkivuokko, H., Tuimala, J. & Palva, A., 2009, In : BMC Microbiology. 9, 68, 13 p.

Research output: Contribution to journalArticleScientificpeer-review

Sequence element enrichment analysis to determine the genetic basis of bacterial phenotypes

Lees, J. A., Vehkala, M., Välimäki, N., Harris, S. R., Chewapreecha, C., Croucher, N. J., Marttinen, P., Davies, M. R., Steer, A. C., Tong, S. Y. C., Honkela, A., Parkhill, J., Bentley, S. & Corander, J., 16 Sep 2016, In : Nature Communications. 7, 8 p., 12797.

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Sequence variants at CHRNB3-CHRNA6 and CYP2A6 affect smoking behavior

Thorgeirsson, T. E., Gudbjartsson, D. F., Surakka, I. L., Vink, J. M., Amin, N., Geller, F., Sulem, P., Rafnar, T., Esko, T., Walter, S., Gieger, C., Rawal, R., Mangino, M., Prokopenko, I., Maegi, R., Keskitalo, K., Gudjonsdottir, I. H., Gretarsdottir, S., Stefansson, H., Thompson, J. R. & 31 others, Aulchenko, Y. S., Nelis, M., Aben, K. K., den Heijer, M., Dirksen, A., Ashraf, H., Soranzo, N., Valdes, A. M., Steves, C., Uitterlinden, A. G., Hofman, A., Toenjes, A., Kovacs, P., Hottenga, J. J., Willemsen, G., Vogelzangs, N., Doering, A., Dahmen, N., Nitz, B., Pergadia, M. L., Saez, B., De Diego, V., Lezcano, V., Garcia-Prats, M. D., Ripatti, S. O., Perola, M., Kettunen, J., Shen, H-Y., Kaprio, J., Palotie, L. & ENGAGE Consortium, 2010, In : Nature Genetics. 42, p. 448-453 6 p.

Research output: Contribution to journalArticleScientificpeer-review

Sex-stratified Genome-wide Association Studies Including 270,000 Individuals Show Sexual Dimorphism in Genetic Loci for Anthropometric Traits

Randall, J. C., Winkler, T. W., Kutalik, Z., Berndt, S. I., Jackson, A. U., Monda, K. L., Kilpelaeinen, T. O., Esko, T., Maegi, R., Li, S., Workalemahu, T., Feitosa, M. F., Croteau-Chonka, D. C., Day, F. R., Fall, T., Ferreira, T., Gustafsson, S., Locke, A. E., Mathieson, I., Scherag, A. & 246 others, Vedantam, S., Wood, A. R., Liang, L., Steinthorsdottir, V., Thorleifsson, G., Dermitzakis, E. T., Dimas, A. S., Karpe, F., Min, J. L., Nicholson, G., Clegg, D. J., Person, T., Krohn, J. P., Bauer, S., Buechler, C., Eisinger, K., Bonnefond, A., Froguel, P., Hottenga, J-J., Prokopenko, I., Waite, L. L., Harris, T. B., Smith, A. V., Shuldiner, A. R., McArdle, W. L., Caulfield, M. J., Munroe, P. B., Gronberg, H., Chen, Y-D. I., Li, G., Beckmann, J. S., Johnson, T., Thorsteinsdottir, U., Teder-Laving, M., Khaw, K-T., Wareham, N. J., Zhao, J. H., Amin, N., Oostra, B. A., Kraja, A. T., Province, M. A., Cupples, L. A., Heard-Costa, N. L., Kaprio, J., Ripatti, S., Surakka, I., Collins, F. S., Saramies, J., Tuomilehto, J., Jula, A., Salomaa, V., Erdmann, J., Hengstenberg, C., Loley, C., Schunkert, H., Lamina, C., Wichmann, H. E., Albrecht, E., Gieger, C., Hicks, A. A., Johansson, A., Pramstaller, P. P., Kathiresan, S., Speliotes, E. K., Penninx, B., Hartikainen, A-L., Jarvelin, M-R., Gyllensten, U., Boomsma, D. I., Campbell, H., Wilson, J. F., Chanock, S. J., Farrall, M., Goel, A., Medina-Gomez, C., Rivadeneira, F., Estrada, K., Uitterlinden, A. G., Hofman, A., Zillikens, M. C., den Heijer, M., Kiemeney, L. A., Maschio, A., Hall, P., Tyrer, J., Teumer, A., Voelzke, H., Kovacs, P., Toenjes, A., Mangino, M., Spector, T. D., Hayward, C., Rudan, I., Hall, A. S., Samani, N. J., Attwood, A. P., Sambrook, J. G., Hung, J., Palmer, L. J., Lokki, M-L., Sinisalo, J-P., Boucher, G., Huikuri, H., Lorentzon, M., Ohlsson, C., Eklund, N., Eriksson, J. G., Barlassina, C., Rivolta, C., Nolte, I. M., Snieder, H., Van der Klauw, M. M., Van Vliet-Ostaptchouk, J. V., Gejman, P. V., Shi, J., Jacobs, K. B., Wang, Z., Bakker, S. J. L., Leach, I. M., Navis, G., van der Harst, P., Martin, N. G., Medland, S. E., Montgomery, G. W., Yang, J., Chasman, D. I., Ridker, P. M., Rose, L. M., Lehtimaki, T., Raitakari, O., Absher, D., Iribarren, C., Basart, H., Hovingh, K. G., Hyppoenen, E., Power, C., Anderson, D., Beilby, J. P., Hui, J., Jolley, J., Sager, H., Bornstein, S. R., Schwarz, P. E. H., Kristiansson, K., Perola, M., Lindstrom, J., Swift, A. J., Uusitupa, M., Atalay, M., Lakka, T. A., Rauramaa, R., Bolton, J. L., Fowkes, G., Fraser, R. M., Price, J. F., Fischer, K., KrjutAikov, K., Metspalu, A., Mihailov, E., Langenberg, C., Luan, J., Ong, K. K., Chines, P. S., Keinanen-Kiukaanniemi, S. M., Saaristo, T. E., Edkins, S., Franks, P. W., Hallmans, G., Shungin, D., Morris, A. D., Palmer, C. N. A., Erbel, R., Moebus, S., Noethen, M. M., Pechlivanis, S., Hveem, K., Narisu, N., Hamsten, A., Humphries, S. E., Strawbridge, R. J., Tremoli, E., Grallert, H., Thorand, B., Illig, T., Koenig, W., Mueller-Nurasyid, M., Peters, A., Boehm, B. O., Kleber, M. E., Maerz, W., Winkelmann, B. R., Kuusisto, J., Laakso, M., Arveiler, D., Cesana, G., Kuulasmaa, K., Virtamo, J., Yarnell, J. W. G., Kuh, D., Wong, A., Lind, L., de Faire, U., Gigante, B., Magnusson, P. K. E., Pedersen, N. L., Dedoussis, G., Dimitriou, M., Kolovou, G., Kanoni, S., Stirrups, K., Bonnycastle, L. L., Njolstad, I., Wilsgaard, T., Ganna, A., Rehnberg, E., Hingorani, A., Kivimäki, M., Kumari, M., Assimes, T. L., Barroso, I. S., Boehnke, M., Borecki, I. B., Deloukas, P., Fox, C. S., Frayling, T., Groop, L. C., Haritunians, T., Hunter, D., Ingelsson, E., Kaplan, R., Mohlke, K. L., O'Connell, J. R., Schlessinger, D., Strachan, D. P., Stefansson, K., van Duijn, C. M., Abecasis, G. R., McCarthy, M. I., Hirschhorn, J. N., Qi, L., Loos, R. J. F., Lindgren, C. M., North, K. E., Heid, I. M., Consortium, DIAGRAM. & Investigators, MAGIC., 1 Jun 2013, In : PLoS Genetics. 9, 6, 19 p., e1003500.

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Shared genetic risk between eating disorder- and substance-use-related phenotypes: Evidence from genome-wide association studies

Munn-Chernoff, M. A., Johnson, E. C., Chou, Y-L., Coleman, J. R. I., Thornton, L. M., Walters, R. K., Yilmaz, Z., Baker, J. H., Hübel, C., Gordon, S., Medland, S. E., Watson, H. J., Gaspar, H. A., Bryois, J., Hinney, A., Leppä, V. M., Mattheisen, M., Ripke, S., Yao, S., Giusti-Rodríguez, P. & 332 others, Hanscombe, K. B., Adan, R. A. H., Alfredsson, L., Ando, T., Andreassen, O. A., Berrettini, W. H., Boehm, I., Boni, C., Boraska Perica, V., Buehren, K., Burghardt, R., Cassina, M., Cichon, S., Clementi, M., Cone, R. D., Courtet, P., Crow, S., Crowley, J. J., Danner, U. N., Davis, O. S. P., de Zwaan, M., Dedoussis, G., Degortes, D., DeSocio, J. E., Dick, D. M., Dikeos, D., Dina, C., Dmitrzak-Weglarz, M., Docampo, E., Duncan, L. E., Egberts, K., Ehrlich, S., Escaramís, G., Esko, T., Estivill, X., Farmer, A., Favaro, A., Fernández-Aranda, F., Fichter, M. M., Fischer, K., Föcker, M., Foretova, L., Forstner, A. J., Forzan, M., Franklin, C. S., Gallinger, S., Giegling, I., Giuranna, J., Gonidakis, F., Gorwood, P., Gratacos Mayora, M., Guillaume, S., Guo, Y., Hakonarson, H., Hatzikotoulas, K., Hauser, J., Hebebrand, J., Helder, S. G., Herms, S., Herpertz-Dahlmann, B., Herzog, W., Huckins, L. M., Hudson, J. I., Imgart, H., Inoko, H., Janout, V., Jiménez-Murcia, S., Julià, A., Kalsi, G., Kaminská, D., Karhunen, L., Karwautz, A., Kas, M. J. H., Kennedy, J. L., Keski-Rahkonen, A., Kiezebrink, K., Kim, Y-R., Klump, K. L., Knudsen, G. P. S., La Via, M. C., Le Hellard, S., Levitan, R. D., Li, D., Lilenfeld, L., Lin, B. D., Lissowska, J., Luykx, J., Magistretti, P. J., Maj, M., Mannik, K., Marsal, S., Marshall, C. R., Mattingsdal, M., McDevitt, S., McGuffin, P., Metspalu, A., Meulenbelt, I., Micali, N., Mitchell, K., Monteleone, A. M., Monteleone, P., Nacmias, B., Navratilova, M., Ntalla, I., O'Toole, J. K., Ophoff, R. A., Padyukov, L., Palotie, A., Pantel, J., Papezova, H., Pinto, D., Rabionet, R., Raevuori, A., Ramoz, N., Reichborn-Kjennerud, T., Ricca, V., Ripatti, S., Ritschel, F., Roberts, M., Rotondo, A., Rujescu, D., Rybakowski, F., Santonastaso, P., Scherag, A., Scherer, S. W., Schmidt, U., Schork, N. J., Schosser, A., Seitz, J., Slachtova, L., Slagboom, P. E., Slof-Op't Landt, M. C. T., Slopien, A., Sorbi, S., Świątkowska, B., Szatkiewicz, J. P., Tachmazidou, I., Tenconi, E., Tortorella, A., Tozzi, F., Treasure, J., Tsitsika, A., Tyszkiewicz-Nwafor, M., Tziouvas, K., van Elburg, A. A., van Furth, E. F., Wagner, G., Walton, E., Widen, E., Zeggini, E., Zerwas, S., Zipfel, S., Bergen, A. W., Boden, J. M., Brandt, H., Crawford, S., Halmi, K. A., Horwood, L. J., Johnson, C., Kaplan, A. S., Kaye, W. H., Mitchell, J., Olsen, C. M., Pearson, J. F., Pedersen, N. L., Strober, M., Werge, T., Whiteman, D. C., Woodside, D. B., Grove, J., Henders, A. K., Larsen, J. T., Parker, R., Petersen, L. V., Jordan, J., Kennedy, M. A., Birgegård, A., Lichtenstein, P., Norring, C., Landén, M., Mortensen, P. B., Polimanti, R., McClintick, J. N., Adkins, A. E., Aliev, F., Bacanu, S-A., Batzler, A., Bertelsen, S., Biernacka, J. M., Bigdeli, T. B., Chen, L-S., Clarke, T-K., Degenhardt, F., Docherty, A. R., Edwards, A. C., Foo, J. C., Fox, L., Frank, J., Hack, L. M., Hartmann, A. M., Hartz, S. M., Heilmann-Heimbach, S., Hodgkinson, C., Hoffmann, P., Hottenga, J-J., Konte, B., Lahti, J., Lahti-Pulkkinen, M., Lai, D., Ligthart, L., Loukola, A., Maher, B. S., Mbarek, H., McIntosh, A. M., McQueen, M. B., Meyers, J. L., Milaneschi, Y., Palviainen, T., Peterson, R. E., Ryu, E., Saccone, N. L., Salvatore, J. E., Sanchez-Roige, S., Schwandt, M., Sherva, R., Streit, F., Strohmaier, J., Thomas, N., Wang, J-C., Webb, B. T., Wedow, R., Wetherill, L., Wills, A. G., Zhou, H., Boardman, J. D., Chen, D., Choi, D-S., Copeland, W. E., Culverhouse, R. C., Dahmen, N., Degenhardt, L., Domingue, B. W., Frye, M. A., Gäbel, W., Hayward, C., Ising, M., Keyes, M., Kiefer, F., Koller, G., Kramer, J., Kuperman, S., Lucae, S., Lynskey, M. T., Maier, W., Mann, K., Männistö, S., Müller-Myhsok, B., Murray, A. D., Nurnberger, J. I., Preuss, U., Räikkönen, K., Reynolds, M. D., Ridinger, M., Scherbaum, N., Schuckit, M. A., Soyka, M., Treutlein, J., Witt, S. H., Wodarz, N., Zill, P., Adkins, D. E., Boomsma, D. I., Bierut, L. J., Brown, S. A., Bucholz, K. K., Costello, E. J., de Wit, H., Diazgranados, N., Eriksson, J. G., Farrer, L. A., Foroud, T. M., Gillespie, N. A., Goate, A. M., Goldman, D., Grucza, R. A., Hancock, D. B., Harris, K. M., Hesselbrock, V., Hewitt, J. K., Hopfer, C. J., Iacono, W. G., Johnson, E. O., Karpyak, V. M., Kendler, K. S., Kranzler, H. R., Krauter, K., Lind, P. A., McGue, M., MacKillop, J., Madden, P. A. F., Maes, H. H., Magnusson, P. K. E., Nelson, E. C., Nöthen, M. M., Palmer, A. A., Penninx, B. W. J. H., Porjesz, B., Rice, J. P., Rietschel, M., Riley, B. P., Rose, R. J., Shen, P-H., Silberg, J., Stallings, M. C., Tarter, R. E., Vanyukov, M. M., Vrieze, S., Wall, T. L., Whitfield, J. B., Zhao, H., Neale, B. M., Wade, T. D., Heath, A. C., Montgomery, G. W., Martin, N. G., Sullivan, P. F., Kaprio, J., Breen, G., Gelernter, J., Edenberg, H. J., Bulik, C. M. & Agrawal, A., 16 Feb 2020, In : Addiction Biology. 20 p., 12880.

Research output: Contribution to journalArticleScientificpeer-review

Siiat tarvitsevat puhtaita matalikkoja

Veneranta, L., Hudd, R. & Vanhatalo, J., Apr 2013, In : Suomen kalastuslehti. 2013, 4, p. 8-10

Research output: Contribution to journalArticleProfessional

Simultaneous Predictive Gaussian Classifiers

Cui, Y., Siren, J., Koski, T. & Corander, J., Apr 2016, In : Journal of Classification. 33, 1, p. 73-102 30 p.

Research output: Contribution to journalArticleScientificpeer-review

Sixteen new lung function signals identified through 1000 Genomes Project reference panel imputation

Artigas, M. S., Wain, L. V., Miller, S., Kheirallah, A. K., Huffman, J. E., Ntalla, I., Shrine, N., Obeidat, M., Trochet, H., McArdle, W. L., Alves, A. C., Hui, J., Zhao, J. H., Joshi, P. K., Teumer, A., Albrecht, E., Imboden, M., Rawal, R., Lopez, L. M., Marten, J. & 31 others, Enroth, S., Surakka, I., Polasek, O., Lyytikainen, L-P., Granell, R., Hysi, P. G., Flexeder, C., Mahajan, A., Beilby, J., Bosse, Y., Brandsma, C-A., Campbell, H., Gieger, C., Glaeser, S., Gonzalez, J. R., Grallert, H., Hammond, C. J., Harris, S. E., Hartikainen, A-L., Heliovaara, M., Henderson, J., Hocking, L., Horikoshi, M., Hutri-Kahonen, N., Ingelsson, E., Johansson, A., Kemp, J. P., Kolcic, I., Kumar, A., Ripatti, S. & UK BiLEVE, Dec 2015, In : Nature Communications. 6, 12 p., 8658.

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SNPs and coronary heart disease Reply

Ripatti, S., Tikkanen, E., Salomaa, V. & Kathiresan, S., 2011, In : Lancet. 377, 9763, p. 379-380 2 p.

Research output: Contribution to journalArticleScientific

Sparse Markov chains for sequence data

Jääskinen, V., Xiong, J., Corander, J. & Koski, T., Sep 2014, In : Scandinavian Journal of Statistics. 41, 3, p. 639–655 17 p.

Research output: Contribution to journalArticleScientificpeer-review

Spatiotemporal modelling of crown-of-thorns starfish outbreaks on the Great Barrier Reef to inform control strategies

Vanhatalo, J. P., Hosack, G. & Sweatman, H., Jan 2017, In : Journal of Applied Ecology. 54, 1, p. 188-197

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Species distribution modeling with Gaussian processes: A case study with the youngest stages of sea spawning whitefish (Coregonus lavaretus L. s.l.) larvae

Vanhatalo, J., Veneranta, L. & Hudd, R., 2012, In : Ecological Modelling. 228, p. 49-58 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Statistical Approach to Quality Control of Large Thermodynamic Databases

Nyman, H., Talonen, T., Roine, A., Hupa, M. & Corander, J., Oct 2012, In : Metallurgical and Materials Transactions B - Process Metallurgy and Materials Processing Science. 43, 5, p. 1113-1118 6 p.

Research output: Contribution to journalArticleScientificpeer-review

Statistical Challenges in the Quantification of Gunshot Residue Evidence

Gauriot, R., Gunaratnam, L., Moroni, R., Reinikainen, T. & Corander, J., Sep 2013, In : Journal of Forensic Sciences. 58, 5, p. 1149-1155 7 p.

Research output: Contribution to journalArticleScientificpeer-review

Statistical modelling of measurement errors in gas chromatographic analyses of blood alcohol content

Moroni, R., Paul, B., Wilhelm, L., Reinikainen, T., Sippola, E. & Corander, J., 2010, In : Forensic Science International. 202, 1-3, p. 71-74 4 p.

Research output: Contribution to journalArticleScientificpeer-review

Statistical properties of the allelic mismatch distribution in neutrally evolving haploid populations

Shubin, M., Numminen, S. E., Gutmann, U. M., Hanage, W. P. & Corander, J. I., 2016, (Submitted) In : American Naturalist.

Research output: Contribution to journalArticleScientificpeer-review

Stratified Gaussian graphical models

Nyman, H., Pensar, J. & Corander, J., 2017, In : Communications in Statistics: Theory and Methods. 46, 11, p. 5556-5578 23 p.

Research output: Contribution to journalArticleScientificpeer-review

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Stratified Graphical Models - Context-Specific Independence in Graphical Models

Nyman, H., Pensar, J., Koski, T. & Corander, J., Dec 2014, In : Bayesian analysis. 9, 4, p. 883-908 26 p.

Research output: Contribution to journalArticleScientificpeer-review

Suomi luomassa genomiikan ja terveystiedon internetiä

Palotie, A. & Ripatti, S., 2017, In : Duodecim. 133, 8, p. 771-775 5 p.

Research output: Contribution to journalArticleProfessional

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Support for involvement of glutamate decarboxylase 1 and neuropeptide y in anxiety susceptibility

Donner, J., Sipila, T., Ripatti, S., Kananen, L., Chen, X., Kendler, K. S., Lönnqvist, J., Pirkola, S., Hettema, J. M. & Hovatta, I., 2012, In : American journal of medical genetics. Part B, Neuropsychiatric genetics. 159B, 3, p. 316-327 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Systematic identification of trans eQTLs as putative drivers of known disease associations

Westra, H-J., Peters, M. J., Esko, T., Yaghootkar, H., Schurmann, C., Kettunen, J., Christiansen, M. W., Fairfax, B. P., Schramm, K., Powell, J. E., Zhernakova, A., Zhernakova, D. V., Veldink, J. H., Van den Berg, L. H., Karjalainen, J., Withoff, S., Uitterlinden, A. G., Hofman, A., Rivadeneira, F., 't Hoen, P. A. C. & 39 others, Reinmaa, E., Fischer, K., Nelis, M., Milani, L., Melzer, D., Ferrucci, L., Singleton, A. B., Hernandez, D. G., Nalls, M. A., Homuth, G., Nauck, M., Radke, D., Voelker, U., Perola, M., Salomaa, V., Brody, J., Suchy-Dicey, A., Gharib, S. A., Enquobahrie, D. A., Lumley, T., Montgomery, G. W., Makino, S., Prokisch, H., Herder, C., Roden, M., Grallert, H., Meitinger, T., Strauch, K., Li, Y., Jansen, R. C., Visscher, P. M., Knight, J. C., Psaty, B. M., Ripatti, S., Teumer, A., Frayling, T. M., Metspalu, A., van Meurs, J. B. J. & Franke, L., Oct 2013, In : Nature Genetics. 45, 10, p. 1238-U195 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Targeted Resequencing of the Pericentromere of Chromosome 2 Linked to Constitutional Delay of Growth and Puberty

Cousminer, D. L., Leinonen, J. T., Sarin, A-P., Chheda, H., Surakka, I., Wehkalampi, K., Ellonen, P., Ripatti, S., Dunkel, L., Palotie, A. & Widen, E., 1 Jun 2015, In : PLoS One. 10, 6, 16 p., 0128524.

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The Biomarker GlycA is Associated with Chronic Inflammation and Predicts Long-Term Risk of Severe Infection

Ritchie, S. C., Würtz, P., Nath, A. P., Abraham, G., Havulinna, A. S., Fearnley, L. G., Sarin, A-P., Kangas, A. J., Soininen, P., Aalto, K., Seppälä, I., Raitoharju, E., Salmi, M., Maksimow, M., Männistö, S., Kähönen, M., Juonala, M., Ripatti, S., Lehtimäki, T., Jalkanen, S. & 6 others, Perola, M., Raitakari, O., Salomaa, V., Ala-Korpela, M., Kettunen, J. & Inouye, M., 2015, In : Cell Systems. 1, 4, p. 293-301 9 p.

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The Challenges of Genome-Wide Interaction Studies: Lessons to Learn from the Analysis of HDL Blood Levels

van Leeuwen, E. M., Smouter, F. A. S., Kam-Thong, T., Karbalai, N., Smith, A. V., Harris, T. B., Launer, L. J., Sitlani, C. M., Li, G., Brody, J. A., Bis, J. C., White, C. C., Jaiswal, A., Oostra, B. A., Hofman, A., Rivadeneira, F., Uitterlinden, A. G., Boerwinkle, E., Ballantyne, C. M., Gudnason, V. & 8 others, Psaty, B. M., Cupples, L. A., Jaervelin, M-R., Ripatti, S., Isaacs, A., Mueller-Myhsok, B., Karssen, L. C. & van Duijn, C. M., 20 Oct 2014, In : PLoS One. 9, 10, 13 p., e109290.

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The Contribution of Genetic Variation of Streptococcus pneumoniae to the Clinical Manifestation of Invasive Pneumococcal Disease

Cremers, A. J. H., Mobegi, F. M., van der Gaast-de Jongh, C., van Weert, M., van Opzeeland, F. J., Vehkala, M., Knol, M. J., Bootsma, H. J., Välimaki, N., Croucher, N. J., Meis, J. F., Bentley, S., van Hijum, S. A. F. T., Corander, J., Zomer, A. L., Ferwerda, G. & de Jonge, M. I., 1 Jan 2019, In : Clinical Infectious Diseases. 68, 1, p. 61-69 9 p.

Research output: Contribution to journalArticleScientificpeer-review

The Contribution of GWAS Loci in Familial Dyslipidemias

Ripatti, P., Ramo, J. T., Soderlund, S., Surakka, I., Matikainen, N., Pirinen, M., Pajukanta, P., Sarin, A-P., Service, S. K., Laurila, P-P., Ehnholm, C., Salomaa, V., Wilson, R. K., Palotie, A., Freimer, N. B., Taskinen, M-R. & Ripatti, S., May 2016, In : PLoS Genetics. 12, 5, 14 p., 1006078.

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The de novo genome assembly and annotation of a female domestic dromedary of North African origin

Fitak, R. R., Mohandesan, E., Corander, J. & Burger, P. A., Jan 2016, In : Molecular Ecology Resources. 16, 1, p. 314-324 11 p.

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The Evolutionary Path to Extraintestinal Pathogenic, Drug-Resistant Escherichia coli Is Marked by Drastic Reduction in Detectable Recombination within the Core Genome

McNally, A., Cheng, L., Harris, S. R. & Corander, J., 2013, In : Genome Biology and Evolution. 5, 4, p. 699-710 12 p.

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The evolution of ecological facilitation within mixed-species biofilms in the mouse gastrointestinal tract

Lin, X. B., Wang, T., Stothard, P., Corander, J., Wang, J., Baines, J. F., Knowles, S. C. L., Baltrunaité, L., Tasseva, G., Schmaltz, R., Tollenaar, S., Cody, L. A., Grenier, T., Wu, W., Ramer-Tait, A. E. & Walter, J., 16 Jul 2018, In : ISME Journal. 12, 11, p. 2770-2784 15 p.

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The fine-scale genetic structure of the British population

Leslie, S., Winney, B., Hellenthal, G., Davison, D., Boumertit, A., Day, T., Hutnik, K., Royrvik, E. C., Cunliffe, B., Lawson, D. J., Falush, D., Freeman, C., Pirinen, M., Myers, S., Robinson, M., Donnelly, P., Bodmer, W., Wellcome Trust Case Control & Int Multiple Sclerosis Genetics, 19 Mar 2015, In : Nature. 519, 7543, p. 309-+ 24 p.

Research output: Contribution to journalArticleScientificpeer-review

The Genetic Structure of the Swedish Population

Humphreys, K., Grankvist, A., Leu, M., Hall, P., Liu, J., Ripatti, S., Rehnstroem, K., Groop, L., Klareskog, L., Ding, B., Gronberg, H., Xu, J., Pedersen, N. L., Lichtenstein, P., Mattingsdal, M., Andreassen, O. A., O'Dushlaine, C., Purcell, S. M., Sklar, P., Sullivan, P. F. & 3 others, Hultman, C. M., Palmgren, J. & Magnusson, P. K. E., 2011, In : PLoS One. 6, 8, p. Article Number: e22547 11 p.

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The genome-wide patterns of variation expose significant substructure in a founder population

Jakkula, E., Rehnström, K., Varilo, T., Pietiläinen, O., Paunio, T., Pedersen, N., deFaire, U., Järvelin, M-R., Saharinen, J., Freimer, N., Ripatti, S., Purcell, S., Collins, A., Daly, M., Palotie, A. & Peltonen, L., 2008, In : American Journal of Human Genetics. 83, 12, p. 787-794 8 p.

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The impact of antimicrobials on gonococcal evolution

Sanchez-Buso, L., Golparian, D., Corander, J., Grad, Y. H., Ohnishi, M., Flemming, R., Parkhill, J., Bentley, S. D., Unemo, M. & Harris, S. R., Nov 2019, In : Nature Microbiology. 4, 11, p. 1941-1950 10 p.

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The impact of host metapopulation structure on the population genetics of colonizing bacteria

Numminen, S. E., Gutmann, U. M., Shubin, M., Marttinen, P. E., Méric, G., van Schaik, W., Coque, T. M., Baquero, F., Willems, R. J. L., Sheppard, S. K., Feil, E. J., Hanage, W. P. & Corander, J. I., 2016, In : Journal of Theoretical Biology. 396, p. 53-62 10 p.

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The impact of low-frequency and rare variants on lipid levels

Surakka, I., Horikoshi, M., Magi, R., Sarin, A-P., Mahajan, A., Lagou, V., Marullo, L., Ferreira, T., Miraglio, B., Timonen, S., Kettunen, J., Pirinen, M., Karjalainen, J., Thorleifsson, G., Hagg, S., Hottenga, J-J., Isaacs, A., Ladenvall, C., Beekman, M., Esko, T. & 31 others, Ried, J. S., Nelson, C. P., Willenborg, C., Gustafsson, S., Westra, H-J., Blades, M., de Craen, A. J. M., de Geus, E. J., Deelen, J., Grallert, H., Hamsten, A., Havulinna, A. S., Hengstenberg, C., Houwing-Duistermaat, J. J., Hypponen, E., Karssen, L. C., Lehtimaki, T., Lyssenko, V., Magnusson, P. K. E., Mihailov, E., Mpindi, J-P., Perola, M., Kaprio, J., Groop, L., Eriksson, J. G., Ikonen, E., Kallioniemi, O., Pietiainen, V., Palotie, A., Ripatti, S. & ENGAGE Consortium, Jun 2015, In : Nature Genetics. 47, 6, p. 589-597 9 p.

Research output: Contribution to journalArticleScientificpeer-review