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Plasma HDL cholesterol and risk of myocardial infarction: a mendelian randomisation study

Voight, B. F., Peloso, G. M., Orho-Melander, M., Frikke-Schmidt, R., Barbalic, M., Jensen, M. K., Hindy, G., Holm, H., Ding, E. L., Johnson, T., Schunkert, H., Samani, N. J., Clarke, R., Hopewell, J. C., Thompson, J. F., Li, M., Thorleifsson, G., Newton-Cheh, C., Musunuru, K., Pirruccello, J. P. & 106 others, Saleheen, D., Chen, L., Stewart, A. F. R., Schillert, A., Thorsteinsdottir, U., Thorgeirsson, G., Anand, S., Engert, J. C., Morgan, T., Spertus, J., Stoll, M., Berger, K., Martinelli, N., Girelli, D., McKeown, P. P., Patterson, C. C., Epstein, S. E., Devaney, J., Burnett, M-S., Mooser, V., Ripatti, S., Surakka, I., Nieminen, M. S., Sinisalo, J-P., Lokki, M-L., Perola, M., Havulinna, A., de Faire, U., Gigante, B., Ingelsson, E., Zeller, T., Wild, P., de Bakker, P. I. W., Klungel, O. H., Maitland-van der Zee, A-H., Peters, B. J. M., de Boer, A., Grobbee, D. E., Kamphuisen, P. W., Deneer, V. H. M., Elbers, C. C., Onland-Moret, N. C., Hofker, M. H., Wijmenga, C., Verschuren, W. M. M., Boer, J. M. A., van der Schouw, Y. T., Rasheed, A., Frossard, P., Demissie, S., Willer, C., Do, R., Ordovas, J. M., Abecasis, G. R., Boehnke, M., Mohlke, K. L., Daly, M. J., Guiducci, C., Burtt, N. P., Surti, A., Gonzalez, E., Purcell, S., Gabriel, S., Marrugat, J., Peden, J., Erdmann, J., Diemert, P., Willenborg, C., Koenig, I. R., Fischer, M., Hengstenberg, C., Ziegler, A., Buysschaert, I., Lambrechts, D., Van de Werf, F., Fox, K. A., El Mokhtari, N. E., Rubin, D., Schrezenmeir, J., Schreiber, S., Schaefer, A., Danesh, J., Blankenberg, S., Roberts, R., McPherson, R., Watkins, H., Hall, A. S., Overvad, K., Rimm, E., Boerwinkle, E., Tybjaerg-Hansen, A., Cupples, L. A., Reilly, M. P., Melander, O., Mannucci, P. M., Ardissino, D., Siscovick, D., Elosua, R., Stefansson, K., O'Donnell, C. J., Salomaa, V., Rader, D. J., Palotie, L., Schwartz, S. M., Altshuler, D. & Kathiresan, S., 2012, In : Lancet. 380, 9841, p. 572-580 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Phylogeographic variation in recombination rates within a global clone of methicillin-resistant Staphylococcus aureus

Castillo-Ramirez, S., Corander, J., Marttinen, P., Aldeljawi, M., Hanage, W. P., Westh, H., Boye, K., Gulay, Z., Bentley, S. D., Parkhill, J., Holden, M. T. & Feil, E. J., 2012, In : Genome Biology. 13, 12, p. R126 13 p.

Research output: Contribution to journalArticleScientificpeer-review

Phenotype mining in CNV carriers from a population cohort

Pietilainen, O. P. H., Rehnstrom, K., Jakkula, E., Service, S. K., Congdon, E., Tilgmann, C., Hartikainen, A-L., Taanila, A., Heikura, U., Paunio, T., Ripatti, S., Jarvelin, M-R., Isohanni, M., Sabatti, C., Palotie, A., Freimer, N. B. & Palotie, L., 2011, In : Human Molecular Genetics. 20, 13, p. 2686-2695 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Phenome-wide association studies across large population cohorts support drug target validation

23andMe Res Team, 16 Oct 2018, In : Nature Communications. 9, 13 p., 4285.

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Pharmacogenomics of Hypertension: A Genome-Wide, Placebo-Controlled Cross-Over Study, Using Four Classes of Antihypertensive Drugs

Hiltunen, T. P., Donner, K. M., Sarin, A-P., Saarela, J., Ripatti, S., Chapman, A. B., Gums, J. G., Gong, Y., Cooper-DeHoff, R. M., Frau, F., Glorioso, V., Zaninello, R., Salvi, E., Glorioso, N., Boerwinkle, E., Turner, S. T., Johnson, J. A. & Kontula, K. K., Jan 2015, In : Journal of the American Heart Association. 4, 1, 26 p., 001521.

Research output: Contribution to journalArticleScientificpeer-review

Patterns of genome evolution that have accompanied host adaptation in Salmonella

Langridge, G. C., Fookes, M., Connor, T. R., Feltwell, T., Feasey, N., Parsons, B. N., Seth-Smith, H. M. B., Barquist, L., Stedman, A., Humphrey, T., Wigley, P., Peters, S. E., Maskell, D. J., Corander, J., Chabalgoity, J. A., Barrow, P., Parkhill, J., Dougan, G. & Thomson, N. R., 20 Jan 2015, In : Proceedings of the National Academy of Sciences of the United States of America. 112, 3, p. 863-868 6 p.

Research output: Contribution to journalArticleScientificpeer-review

Patterns of cross-resistance and collateral sensitivity between clinical antibiotics and natural antimicrobials

Colclough, A., Corander, J., Sheppard, S. K., Bayliss, S. C. & Vos, M., Jun 2019, In : Evolutionary Applications. 12, 5, p. 878-887 10 p.

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Patients with rheumatic diseases share similar patterns of healthcare resource utilization

Mars, NJ., Kerola, AM., Kauppi, MJ., Pirinen, M., Elonheimo, O. & Sokka-Isler, T., 4 Jul 2019, In : Scandinavian Journal of Rheumatology. 48, 4, p. 300-307 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Partial Sleep Restriction Activates Immune Response-Related Gene Expression Pathways: Experimental and Epidemiological Studies in Humans

Aho, V., Ollila, H. M., Rantanen, V., Kronholm, E., Surakka, I., van Leeuwen, W. M. A., Lehto, M., Matikainen, S., Ripatti, S., Harma, M., Sallinen, M., Salomaa, V., Jauhiainen, M., Alenius, H., Paunio, T. & Porkka-Heiskanen, T., 23 Oct 2013, In : PLoS One. 8, 10, 12 p., e77184.

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Parent-of-origin-specific allelic associations among 106 genomic loci for age at menarche

Perry, J. R. B., Day, F., Elks, C. E., Sulem, P., Thompson, D. J., Ferreira, T., He, C., Chasman, D. I., Esko, T., Thorleifsson, G., Albrecht, E., Ang, W. Q., Corre, T., Cousminer, D. L., Feenstra, B., Franceschini, N., Ganna, A., Johnson, A. D., Kjellqvist, S., Lunetta, K. L. & 35 others, McMahon, G., Nolte, I. M., Paternoster, L., Porcu, E., Smith, A. V., Stolk, L., Teumer, A., Tsernikova, N., Tikkanen, E., Ulivi, S., Wagner, E. K., Amin, N., Bierut, L. J., Byrne, E. M., Hottenga, J-J., Koller, D. L., Mangino, M., Pers, T. H., Yerges-Armstrong, L. M., Zhao, J. H., Andrulis, I. L., Anton-Culver, H., Atsma, F., Bandinelli, S., Blomqvist, C., Eriksson, J. G., Nevanlinna, H., Palotie, A., Widen, E., Australian Ovarian Canc Study, GENICA Network, kConFabt LifeLines Cohort Study, InterAct Consortium, Early Growth Genetics EGG Consorti & Ripatti, S., 2 Oct 2014, In : Nature. 514, 7520, p. 92-+ 17 p.

Research output: Contribution to journalArticleScientificpeer-review

Parallell interacting MCMC for learning of topologies of graphical models

Corander, J., Ekdahl, M. & Koski, T., 2008, In : Data Mining and Knowledge Discovery. 17, 3, p. 431-456 26 p.

Research output: Contribution to journalArticleScientificpeer-review

Parallel independent evolution of pathogenicity within the genus Yersinia

Reuter, S., Connor, T. R., Barquist, L., Walker, D., Feltwell, T., Harris, S. R., Fookes, M., Hall, M. E., Petty, N. K., Fuchs, T. M., Corander, J., Dufour, M., Ringwood, T., Savin, C., Bouchier, C., Martin, L., Miettinen, M., Shubin, M., Riehm, J. M., Laukkanen-Ninios, R. & 13 others, Sihvonen, L. M., Siitonen, A., Skurnik, M., Falcao, J. P., Fukushima, H., Scholz, H. C., Prentice, M. B., Wren, B. W., Parkhill, J., Carniel, E., Achtman, M., McNally, A. & Thomson, N. R., 6 May 2014, In : Proceedings of the National Academy of Sciences of the United States of America. 111, 18, p. 6768-6773 6 p.

Research output: Contribution to journalArticleScientificpeer-review

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PANINI: Pangenome Neighbour Identification for Bacterial Populations

Abudahab, K., Prada, J. M., Yang, Z., Bentley, S. D., Croucher, N. J., Corander, J. & Aanensen, D. M., Apr 2019, In : Microbial Genomics. 5, 4, 10 p., 000220.

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Pain in 1,000 women treated for breast cancer: a prospective study of pain sensitivity and postoperative pain

Kaunisto, M., Jokela, R., Tallgren, M., Kambur, O., Tikkanen, E., Tasmuth, T., Reetta, S., Palotie, A., Estlander, A-M., Leidenius, M. H., Ripatti, S. O. & Kalso, E., Dec 2013, In : Anesthesiology. 119, 6, p. 1410-1421 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Orthogonal parallel MCMC methods for sampling and optimization

Martino, L., Elvira, V., Luengo, D., Corander, J. & Louzada, F., Nov 2016, In : Digital Signal Processing. 58, p. 64-84 21 p.

Research output: Contribution to journalArticleScientificpeer-review

Optimal Viterbi Bayesian Predictive Classification for Data from Finite Alphabets

Corander, J., Xiong, J., Cui, Y. & Koski, T., Feb 2013, In : Journal of Statistical Planning and Inference. 143, 2, p. 261-275 15 p.

Research output: Contribution to journalArticleScientificpeer-review

On the Outage Capacity of Orthogonal Space-Time Block Codes Over Multi-Cluster Scattering MIMO Channels

Wei, L., Zheng, Z., Corander, J. & Taricco, G., May 2015, In : IEEE Transactions on Communications. 63, 5, p. 1700-1711 12 p.

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On the inconsistency of ℓ1-penalised sparse precision matrix estimation

Heinävaara, O., Leppä-Aho, J., Corander, J. & Honkela, A., 13 Dec 2016, In : BMC Bioinformatics. 17, Suppl 16, p. 99-107 9 p.

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On the Identifiability of Transmission Dynamic Models for Infectious Diseases

Lintusaari, J., Gutmann, M. U., Kaski, S. & Corander, J., Mar 2016, In : Genetics. 202, 3, p. 911-918 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Obstructive sleep apnoea and the risk for coronary heart disease and type 2 diabetes: a longitudinal population-based study in Finland

Strausz, S., Havulinna, A. S., Tuomi, T., Bachour, A., Groop, L., Mäkitie, A., Koskinen, S., Salomaa, V., Palotie, A., Ripatti, S. & Palotie, T., Oct 2018, In : BMJ Open. 8, 10, 8 p., 022752.

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Novel staphylococcal species that form part of a Staphylococcus aureus-related complex: the non-pigmented Staphylococcus argenteus sp nov and the non-human primate-associated Staphylococcus schweitzeri sp nov.

Tong, S. Y. C., Schaumburg, F., Ellington, M. J., Corander, J., Pichon, B., Leendertz, F., Bentley, S. D., Parkhill, J., Holt, D. C., Peters, G. & Giffard, P. M., Jan 2015, In : International Journal of Systematic and Evolutionary Microbiology. 65, p. 15-22 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Novel R Pipeline for Analyzing Biolog Phenotypic Microarray Data

Vehkala, M., Shubin, M., Connor, T. R., Thomson, N. R. & Corander, J., 18 Mar 2015, In : PLoS One. 10, 3, p. 1-14 14 p., 0118392.

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Novel Loci for Metabolic Networks and Multi-Tissue Expression Studies Reveal Genes for Atherosclerosis

Inouye, M., Ripatti, S., Kettunen, J., Lyytikainen, L-P., Oksala, N., Laurila, P-P., Kangas, A. J., Soininen, P., Savolainen, M. J., Viikari, J., Kahonen, M., Perola, M., Salomaa, V., Raitakari, O., Lehtimaki, T., Taskinen, M-R., Jaervelin, M-R., Ala-Korpela, M., Palotie, A. & de Bakker, P. I. W., 1 Aug 2012, In : PLoS Genetics. 8, 8, p. e1002907

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Novel Loci for Adiponectin Levels and Their Influence on Type 2 Diabetes and Metabolic Traits: A Multi-Ethnic Meta-Analysis of 45,891 Individuals

Dastani, Z., Hivert, M-F., Timpson, N., Perry, J. R. B., Yuan, X., Scott, R. A., Henneman, P., Heid, I. M., Kizer, J. R., Lyytikainen, L-P., Fuchsberger, C., Tanaka, T., Morris, A. P., Small, K., Isaacs, A., Beekman, M., Coassin, S., Lohman, K., Qi, L., Kanoni, S. & 31 others, Pankow, J. S., Uh, H-W., Wu, Y., Bidulescu, A., Rasmussen-Torvik, L. J., Greenwood, C. M. T., Ladouceur, M., Grimsby, J., Manning, A. K., Liu, C-T., Kooner, J., Mooser, V. E., Vollenweider, P., Kapur, K. A., Chambers, J., Wareham, N. J., Langenberg, C., Frants, R., Willems-vanDijk, K., Oostra, B. A., Willems, S. M., Lamina, C., Winkler, T. W., Psaty, B. M., Nuotio, M-L., Perola, M., Eriksson, J. G., GLGC Investigators, DIAGRAM Consortium, MAGIC Consortium, MuTHER Consortium, Ripatti, S., Kaprio, J. & Lokki, M-L., 2012, In : PLoS Genetics. 8, 3, p. e1002607 23 p.

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Novel Blood Pressure Locus and Gene Discovery Using Genome-Wide Association Study and Expression Data Sets From Blood and the Kidney

Wain, L. V., Vaez, A., Jansen, R., Joehanes, R., van der Most, P. J., Erzurumluoglu, A. M., O'Reilly, P. F., Cabrera, C. P., Warren, H. R., Rose, L. M., Verwoert, G. C., Hottenga, J-J., Strawbridge, R. J., Esko, T., Arking, D. E., Hwang, S-J., Guo, X., Kutalik, Z., Trompet, S., Shrine, N. & 33 others, Teumer, A., Ried, J. S., Bis, J. C., Smith, A. V., Amin, N., Nolte, I. M., Lyytikainen, L-P., Mahajan, A., Wareham, N. J., Hofer, E., Joshi, P. K., Kristiansson, K., Traglia, M., Havulinna, A. S., Goel, A., Nalls, M. A., Sober, S., Vuckovic, D., Luan, J., Del Greco M, F., Ayers, K. L., Marrugat, J., Ruggiero, D., Lopez, L. M., Niiranen, T., Enroth, S., Palotie, A., Ripatti, S., Sarin, A-P., Perola, M., BIOS Consortium, Lifelines Cohort Study & Understanding Soc Sci Grp, Sep 2017, In : Hypertension. 70, 3, p. E4-+ 49 p.

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NordicDB: a Nordic pool and portal for genome-wide control data

Leu, M., Humphreys, K., Surakka, I., Rehnberg, E., Muilu, J., Rosenstrom, P., Almgren, P., Jaaskelainen, J., Lifton, R. P., Kyvik, K. O., Kaprio, J., Pedersen, N. L., Palotie, A., Hall, P., Gronberg, H., Groop, L., Peltonen, L., Palmgren, J. & Ripatti, S., 2010, In : European Journal of Human Genetics. 18, p. 1322-1326 5 p.

Research output: Contribution to journalArticleScientificpeer-review

Non-stationary Gaussian models with physical barriers

Bakka, H., Vanhatalo, J., Illian, J. B., Simpson, D. & Rue, H., Mar 2019, In : Spatial statistics. 29, p. 268-288 21 p.

Research output: Contribution to journalArticleScientificpeer-review

No genetic evidence of sex-biased dispersal in a lekking bird, the capercaillie (Tetrao urogallus)

Mäki-Petäys, H., Corander, J., Aalto, J., Liukkonen, T., Helle, P. & Orell, M., 2007, In : Journal of Evolutionary Biology. 20, 3, p. 865-873 9 p.

Research output: Contribution to journalArticleScientificpeer-review

No Association of Coronary Artery Disease with X-Chromosomal Variants in Comprehensive International Meta-Analysis

Loley, C., Alver, M., Assimes, T. L., Bjonnes, A., Goel, A., Gustafsson, S., Hernesniemi, J., Hopewell, J. C., Kanoni, S., Kleber, M. E., Lau, K. W., Lu, Y., Lyytikainen, L-P., Nelson, C. P., Nikpay, M., Qu, L., Salfati, E., Scholz, M., Tukiainen, T., Willenborg, C. & 58 others, Won, H-H., Zeng, L., Zhang, W., Anand, S. S., Beutner, F., Bottinger, E. P., Clarke, R., Dedoussis, G., Do, R., Esko, T., Eskola, M., Farrall, M., Gauguier, D., Giedraitis, V., Granger, C. B., Hall, A. S., Hamsten, A., Hazen, S. L., Huang, J., Kahonen, M., Kyriakou, T., Laaksonen, R., Lind, L., Lindgren, C., Magnusson, P. K. E., Marouli, E., Mihailov, E., Morris, A. P., Nikus, K., Pedersen, N., Rallidis, L., Salomaa, V., Shah, S. H., Stewart, A. F. R., Thompson, J. R., Zalloua, P. A., Chambers, J. C., Collins, R., Ingelsson, E., Iribarren, C., Karhunen, P. J., Kooner, J. S., Lehtimaki, T., Loos, R. J. F., Maerz, W., McPherson, R., Metspalu, A., Reilly, M. P., Ripatti, S., Sanghera, D. K., Thiery, J., Watkins, H., Deloukas, P., Kathiresan, S., Samani, N. J., Schunkert, H., Erdmann, J. & Koenig, I. R., 12 Oct 2016, In : Scientific Reports. 6, 9 p., 35278.

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New loci for body fat percentage reveal link between adiposity and cardiometabolic disease risk

Lu, Y., Day, F. R., Gustafsson, S., Buchkovich, M. L., Na, J., Bataille, V., Cousminer, D. L., Dastani, Z., Drong, A. W., Esko, T., Evans, D. M., Falchi, M., Feitosa, M. F., Ferreira, T., Hedman, A. K., Haring, R., Hysi, P. G., Iles, M. M., Justice, A. E., Kanoni, S. & 239 others, Lagou, V., Li, R., Li, X., Locke, A., Lu, C., Magi, R., Perry, J. R. B., Pers, T. H., Qi, Q., Sanna, M., Schmidt, E. M., Scott, W. R., Shungin, D., Teumer, A., Vinkhuyzen, A. A. E., Walker, R. W., Westra, H-J., Zhang, M., Zhang, W., Zhao, J. H., Zhu, Z., Afzal, U., Ahluwalia, T. S., Bakker, S. J. L., Bellis, C., Bonnefond, A., Borodulin, K., Buchman, A. S., Cederholm, T., Choh, A. C., Choi, H. J., Curran, J. E., de Groot, L. C. P. G. M., De Jager, P. L., Dhonukshe-Rutten, R. A. M., Enneman, A. W., Eury, E., Evans, D. S., Forsen, T., Friedrich, N., Fumeron, F., Garcia, M. E., Gartner, S., Han, B-G., Havulinna, A. S., Hayward, C., Hernandez, D., Hillege, H., Ittermann, T., Kent, J. W., Kolcic, I., Laatikainen, T., Lahti, J., Leach, I. M., Lee, C. G., Lee, J-Y., Liu, T., Liu, Y., Lobbens, S., Loh, M., Lyytikainen, L-P., Medina-Gomez, C., Michaelsson, K., Nalls, M. A., Nielson, C. M., Oozageer, L., Pascoe, L., Paternoster, L., Polasek, O., Ripatti, S., Sarzynski, M. A., Shin, C. S., Narancic, N. S., Spira, D., Srikanth, P., Steinhagen-Thiessen, E., Sung, Y. J., Swart, K. M. A., Taittonen, L., Tanaka, T., Tikkanen, E., van der Velde, N., van Schoor, N. M., Verweij, N., Wright, A. F., Yu, L., Zmuda, J. M., Pellikka, N., Forrester, T., Grarup, N., Jackson, A. U., Kristiansson, K., Kuulasmaa, T., Kuusisto, J., Lichtner, P., Luan, J., Mahajan, A., Mannisto, S., Palmer, C. D., Ried, J. S., Scott, R. A., Stancakova, A., Wagner, P. J., Demirkan, A., Doring, A., Gudnason, V., Kiel, D. P., Kuhnel, B., Mangino, M., Mcknight, B., Menni, C., O'Connell, J. R., Oostra, B. A., Shuldiner, A. R., Song, K., Vandenput, L., van Duijn, C. M., Vollenweider, P., White, C. C., Boehnke, M., Boettcher, Y., Cooper, R. S., Forouhi, N. G., Gieger, C., Grallert, H., Hingorani, A., Jorgensen, T., Jousilahti, P., Kivimaki, M., Kumari, M., Laakso, M., Langenberg, C., Linneberg, A., Luke, A., Mckenzie, C. A., Palotie, A., Pedersen, O., Peters, A., Strauch, K., Tayo, B. O., Wareham, N. J., Bennett, D. A., Bertram, L., Blangero, J., Bluher, M., Bouchard, C., Campbell, H., Cho, N. H., Cummings, S. R., Czerwinski, S. A., Demuth, I., Eckardt, R., Eriksson, J. G., Ferrucci, L., Franco, O. H., Froguel, P., Gansevoort, R. T., Hansen, T., Harris, T. B., Hastie, N., Heliovaara, M., Hofman, A., Jordan, J. M., Jula, A., Kahonen, M., Kajantie, E., Knekt, P. B., Koskinen, S., Kovacs, P., Lehtimaki, T., Lind, L., Liu, Y., Orwoll, E. S., Osmond, C., Perola, M., Perusse, L., Raitakari, O. T., Rankinen, T., Rao, D. C., Rice, T. K., Rivadeneira, F., Rudan, I., Salomaa, V., Sorensen, T. I. A., Stumvoll, M., Tonjes, A., Towne, B., Tranah, G. J., Tremblay, A., Uitterlinden, A. G., van der Harst, P., Vartiainen, E., Viikari, J. S., Vitart, V., Vohl, M-C., Volzke, H., Walker, M., Wallaschofski, H., Wild, S., Wilson, J. F., Yengo, L., Bishop, D. T., Borecki, I. B., Chambers, J. C., Cupples, L. A., Dehghan, A., Deloukas, P., Fatemifar, G., Fox, C., Furey, T. S., Franke, L., Han, J., Hunter, D. J., Karjalainen, J., Karpe, F., Kaplan, R. C., Kooner, J. S., McCarthy, M. I., Murabito, J. M., Morris, A. P., Bishop, J. A. N., North, K. E., Ohlsson, C., Ong, K. K., Prokopenko, I., Richards, J. B., Schadt, E. E., Spector, T. D., Widen, E., Willer, C. J., Yang, J., Ingelsson, E., Mohlke, K. L., Hirschhorn, J. N., Pospisilik, J. A., Zillikens, M. C., Lindgren, C., Kilpelainen, T. O. & Loos, R. J. F., Feb 2016, In : Nature Communications. 7, 15 p., 10495.

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New genetic loci link adipose and insulin biology to body fat distribution

Shungin, D., Winkler, T. W., Croteau-Chonka, D. C., Ferreira, T., Lockes, A. E., Maegi, R., Strawbridge, R. J., Pers, T. H., Fischer, K., Justice, A. E., Workalemahu, T., Wu, J. M. W., Buchkovich, M. L., Heard-Costa, N. L., Roman, T. S., Drong, A. W., Song, C., Gustafsson, S., Day, F. R., Esko, T. & 401 others, Fall, T., Kutalik, Z., Luan, J., Randall, J. C., Scherag, A., Vedantam, S., Wood, A. R., Chen, J., Fehrmann, R., Karjalainen, J., Kahali, B., Liu, C-T., Schmidt, E. M., Absher, D., Amin, N., Anderson, D., Beekman, M., Bragg-Gresham, J. L., Buyske, S., Demirkan, A., Ehret, G. B., Feitosa, M. F., Goel, A., Jackson, A. U., Johnson, T., Kleber, M. E., Kristiansson, K., Mangino, M., Leach, I. M., Medina-Gomez, C., Palmer, C. D., Pasko, D., Pechlivaniss, S., Peters, M. J., Prokopenko, I., Stancakova, A., Sung, Y. J., Tanakam, T., Teumer, A., Van Vliet-Ostaptchouk, J. V., Yengo, L., Zhang, W., Albrecht, E., Arnlov, J., Arscott, G. 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L., ADIPOGEN Consortium, CARDIOGRAMplusC4D Consortium, CKDGen Consortium, GEFOS Consortium, GENIE Consortium, GLGC, ICBP, Int Endogene Consortium, LifeLines Cohort Study, MAGIC Investigators, MuTHER Consortium, PAGE Consortium, ReproGen Consortium, Lokki, M-L. & Ripatti, S. O., 12 Feb 2015, In : Nature. 518, 7538, p. 187-U378 22 p.

Research output: Contribution to journalArticleScientificpeer-review

New genetic loci implicated in fasting glucose homeostasis and their impact on type 2 diabetes risk

Dupuis, J., Langenberg, C., Prokopenko, I., Saxena, R., Soranzo, N., Jackson, A. U., Wheeler, E., Glazer, N. L., Bouatia-Naji, N., Gloyn, A. L., Lindgren, C. M., Maegi, R., Morris, A. P., Randall, J., Johnson, T., Elliott, P., Rybin, D., Thorleifsson, G., Steinthorsdottir, V., Henneman, P. & 284 others, Grallert, H., Dehghan, A., Hottenga, J. J., Franklin, C. S., Navarro, P., Song, K., Goel, A., Perry, J. R. B., Egan, J. M., Lajunen, T., Grarup, N., Sparso, T., Doney, A., Voight, B. F., Stringham, H. M., Li, M., Kanoni, S., Shrader, P., Cavalcanti-Proenca, C., Kumari, M., Qi, L., Timpson, N. J., Gieger, C., Zabena, C., Rocheleau, G., Ingelsson, E., An, P., O'Connell, J., Luan, J., Elliott, A., McCarroll, S. A., Payne, F., Roccasecca, R. M., Pattou, F., Sethupathy, P., Ardlie, K., Ariyurek, Y., Balkau, B., Barter, P., Beilby, J. P., Ben-Shlomo, Y., Benediktsson, R., Bennett, A. J., Bergmann, S., Bochud, M., Boerwinkle, E., Bonnefond, A., Bonnycastle, L. L., Borch-Johnsen, K., Boettcher, Y., Brunner, E., Bumpstead, S. J., Charpentier, G., Chen, Y-D. I., Chines, P., Clarke, R., Coin, L. J. M., Cooper, M. N., Cornelis, M., Crawford, G., Crisponi, L., Day, I. N. M., de Geus, E. J. C., Delplanque, J., Dina, C., Erdos, M. R., Fedson, A. C., Fischer-Rosinsky, A., Forouhi, N. G., Fox, C. S., Frants, R., Franzosi, M. G., Galan, P., Goodarzi, M. O., Graessler, J., Groves, C. J., Grundy, S., Gwilliam, R., Gyllensten, U., Hadjadj, S., Hallmans, G., Hammond, N., Han, X., Hartikainen, A-L., Hassanali, N., Hayward, C., Heath, S. C., Hercberg, S., Herder, C., Hicks, A. A., Hillman, D. R., Hingorani, A. D., Hofman, A., Hui, J., Hung, J., Isomaa, B., Johnson, P. R. V., Jorgensen, T., Jula, A., Kaakinen, M., Kaprio, J., Kesaniemi, Y. A., Kivimäki, M., Knight, B., Koskinen, S., Kovacs, P., Kyvik, K. O., Lathrop, G. M., Lawlor, D. A., Le Bacquer, O., Lecoeur, C., Li, Y., Lyssenko, V., Mahley, R., Mangino, M., Manning, A. K., Martinez-Larrad, M. T., McAteer, J. B., McCulloch, L. J., McPherson, R., Meisinger, C., Melzer, D., Meyre, D., Mitchell, B. D., Morken, M. A., Mukherjee, S., Naitza, S., Narisu, N., Neville, M. J., Oostra, B. A., Orru, M., Pakyz, R., Palmer, C. N. A., Paolisso, G., Pattaro, C., Pearson, D., Peden, J. F., Pedersen, N. L., Perola, M., Pfeiffer, A. F. H., Pichler, I., Polasek, O., Posthuma, D., Potter, S. C., Pouta, A., Province, M. A., Psaty, B. M., Rathmann, W., Rayner, N. W., Rice, K., Ripatti, S., Rivadeneira, F., Roden, M., Rolandsson, O., Sandbaek, A., Sandhu, M., Sanna, S., Sayer, A. A., Scheet, P., Scott, L. J., Seedorf, U., Sharp, S. J., Shields, B., Sigurosson, G., Sijbrands, E. J. G., Silveira, A., Simpson, L., Singleton, A., Smith, N. L., Sovio, U., Swift, A., Syddall, H., Syvaenen, A-C., Tanaka, T., Thorand, B., Tichet, J., Toenjes, A., Tuomi, T., Uitterlinden, A. G., van Dijk, K. W., van Hoek, M., Varma, D., Visvikis-Siest, S., Vitart, V., Vogelzangs, N., Waeber, G., Wagner, P. J., Walley, A., Walters, G. B., Ward, K. L., Watkins, H., Weedon, M. N., Wild, S. H., Willemsen, G., Witteman, J. C. M., Yarnell, J. W. G., Zeggini, E., Zelenika, D., Zethelius, B., Zhai, G., Zhao, J. H., Zillikens, M. C., Borecki, I. B., Loos, R. J. F., Meneton, P., Magnusson, P. K. E., Nathan, D. M., Williams, G. H., Hattersley, A. T., Silander, K., Salomaa, V., Smith, G. D., Bornstein, S. R., Schwarz, P., Spranger, J., Karpe, F., Shuldiner, A. R., Cooper, C., Dedoussis, G. V., Serrano-Rios, M., Morris, A. D., Lind, L., Palmer, L. J., Hu, F. B., Franks, P. W., Ebrahim, S., Marmot, M., Kao, W. H. L., Pankow, J. S., Sampson, M. J., Kuusisto, J., Laakso, M., Hansen, T., Pedersen, O., Pramstaller, P. P., Wichmann, H. E., Illig, T., Rudan, I., Wright, A. F., Stumvoll, M., Campbell, H., Wilson, J. F., Hamsten, A., Bergman, R. N., Buchanan, T. A., Collins, F. S., Mohlke, K. L., Tuomilehto, J., Valle, T. T., Altshuler, D., Rotter, J. I., Siscovick, D. S., Penninx, B. W. J. H., Boomsma, D. I., Deloukas, P., Spector, T. D., Frayling, T. M., Ferrucci, L., Kong, A., Thorsteinsdottir, U., Stefansson, K., van Duijn, C. M., Aulchenko, Y. S., Cao, A., Scuteri, A., Schlessinger, D., Uda, M., Ruokonen, A., Jarvelin, M-R., Waterworth, D. M., Vollenweider, P., Peltonen, L., Mooser, V., Abecasis, G. R., Wareham, N. J., Sladek, R., Froguel, P., Watanabe, R. M., Meigs, J. B., Groop, L., Boehnke, M., McCarthy, M. I., Florez, J. C. & Ines Barroso MAGIC Investigators, Global BPgen Consortium, Procardis Consortium, GIANT Consortium, DIAGRAM Consortium, 2010, In : Nature Genetics. 42, 2, p. 105-116 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Neuregulin signaling pathway in smoking behavior

Gupta, R., Qaiser, B., He, L., Hiekkalinna, T. S., Zheutlin, A. B., Therman, S., Ollikainen, M., Ripatti, S., Perola, M., Salomaa, V., Milani, L., Cannon, T. D., Madden, P. A. F., Korhonen, T., Kaprio, J. & Loukola, A., 22 Aug 2017, In : Translational Psychiatry. 7, 8 p., 1212.

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Multivariate Genome-wide Association Analysis of a Cytokine Network Reveals Variants with Widespread Immune, Haematological, and Cardiometabolic Pleiotropy

Nath, A. P., Ritchie, S. C., Grinberg, N. F., Tang, H. H-F., Huang, Q. Q., Teo, S. M., Ahola-Olli, A. V., Würtz, P., Havulinna, A. S., Santalahti, K., Pitkanen, N., Lehtimäki, T., Kähönen, M., Lyytikäinen, L-P., Raitoharju, E., Seppälä, I., Sarin, A-P., Ripatti, S., Palotie, A., Perola, M. & 10 others, Viikari, J. S., Jalkanen, S., Maksimow, M., Salmi, M., Wallace, C., Raitakari, O. T., Salomaa, V., Abraham, G., Kettunen, J. & Inouye, M., 5 Dec 2019, In : American Journal of Human Genetics. 105, 6, p. 1076-1090 15 p.

Research output: Contribution to journalArticleScientificpeer-review

Multiple Output Regression with Latent Noise

Gillberg, J., Marttinen, P., Pirinen, M., Kangas, A. J., Soininen, P., Ali, M., Havulinna, A. S., Järvelin, M-R., Ala-Korpela, M. & Kaski, S., 1 Jan 2016, In : Journal of Machine Learning Research. 17, 1, p. 4170-4204 35 p.

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Multilocus sequence types of Finnish bovine Campylobacter jejuni isolates and their attribution to human infections

de Haan, C. P. A., Kivistö, R. I., Hakkinen, M., Corander, J. & Hänninen, M-L., 2010, In : BMC Microbiology. 10, 9 p., 200.

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Multilocus sequence types of environmental Campylobacter jejuni isolates and their similarities to those of human, poultry and bovine C. jejuni isolates

de Haan, C. P. A., Lampén, K., Corander, J. & Hänninen, M. -L., 2013, In : Zoonoses and Public Health. 60, 2, p. 125-133 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Multi-ethnic fine-mapping of 14 central adiposity loci

Liu, C-T., Buchkovich, M. L., Winkler, T. W., Heid, I. M., Borecki, I. B., Fox, C. S., Mohlke, K. L., North, K. E., Cupples, L. A., African Ancestry Anthropometry Gen, GIANT Consortium, Ripatti, S. O., Lokki, M-L. & Tuomi, T., 1 Sep 2014, In : Human Molecular Genetics. 23, 17, p. 4738-4744 7 p.

Research output: Contribution to journalArticleScientificpeer-review

Monomorphic genotypes within a generalist lineage of Campylobacter jejuni show signs of global dispersion

Llarena, A-K., Zhang, J., Vehkala, M., Välimäki, N., Hakkinen, M., Hänninen, M-L., Roasto, M., Mäesaar, M., Taboada, E., Barker, D., Garofolo, G., Cammà, C., Di Giannatale, E., Corander, J. & Rossi, M., 1 Oct 2016, In : Microbial Genomics. 2, 14 p.

Research output: Contribution to journalArticleScientificpeer-review

Monitekijäisten tautien genetiikka

Translated title of the contribution: Genetics of multifactorial diseasesKere, J., Ripatti, S. O. & Perola, M., 2010, In : Duodecim. 126, 19, p. 2305-2310

Research output: Contribution to journalArticleProfessional

Mondo-Mlx Mediates Organismal Sugar Sensing through the Gli-Similar Transcription Factor Sugarbabe

Mattila, J., Havula, E., Suominen, E., Teesalu, M., Surakka, I., Hynynen, R., Kilpinen, H., Vaananen, J., Hovatta, I., Kakela, R., Ripatti, S., Sandmann, T. & Hietakangas, V., 13 Oct 2015, In : Cell Reports. 13, 2, p. 350-364 15 p.

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Modulation of Genetic Associations with Serum Urate Levels by Body-Mass-Index in Humans

Huffman, J. E., Albrecht, E., Teumer, A., Mangino, M., Kapur, K., Johnson, T., Kutalik, Z., Pirastu, N., Pistis, G., Lopez, L. M., Haller, T., Salo, P., Goel, A., Li, M., Tanaka, T., Dehghan, A., Ruggiero, D., Malerba, G., Smith, A. V., Nolte, I. M. & 100 others, Portas, L., Phipps-Green, A., Boteva, L., Navarro, P., Johansson, A., Hicks, A. A., Polasek, O., Esko, T., Peden, J. F., Harris, S. E., Murgia, F., Wild, S. H., Tenesa, A., Tin, A., Mihailov, E., Grotevendt, A., Gislason, G. K., Coresh, J., D'Adamo, P., Ulivi, S., Vollenweider, P., Waeber, G., Campbell, S., Kolcic, I., Fisher, K., Viigimaa, M., Metter, J. E., Masciullo, C., Trabetti, E., Bombieri, C., Sorice, R., Doering, A., Reischl, E., Strauch, K., Hofman, A., Uitterlinden, A. G., Waldenberger, M., Wichmann, H-E., Davies, G., Gow, A. J., Dalbeth, N., Stamp, L., Smit, J. H., Kirin, M., Nagaraja, R., Nauck, M., Schurmann, C., Budde, K., Farrington, S. M., Theodoratou, E., Jula, A., Salomaa, V., Sala, C., Hengstenberg, C., Burnier, M., Maegi, R., Klopp, N., Kloiber, S., Schipf, S., Ripatti, S., Cabras, S., Soranzo, N., Homuth, G., Nutile, T., Munroe, P. B., Hastie, N., Campbell, H., Rudan, I., Cabrera, C., Haley, C., Franco, O. H., Merriman, T. R., Gudnason, V., Pirastu, M., Penninx, B. W., Snieder, H., Metspalu, A., Ciullo, M., Pramstaller, P. P., van Duijn, C. M., Ferrucci, L., Gambaro, G., Deary, I. J., Dunlop, M. G., Wilson, J. F., Gasparini, P., Gyllensten, U., Spector, T. D., Wright, A. F., Hayward, C., Watkins, H., Perola, M., Bochud, M., Kao, W. H. L., Caulfield, M., Toniolo, D., Voelzke, H., Gieger, C., Koettgen, A. & Vitart, V., 26 Mar 2015, In : PLoS One. 10, 3, 21 p., 0119752.

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Modelling Variability in Longitudinal Data Using Random Change Point Models

Dominicus, A., Ripatti, S. O., Pedersen, NL. & Palmgren, J., 2008, In : Statistics in Medicine. 2008/7, 27, p. 5786-98 13 p.

Research output: Contribution to journalArticleScientificpeer-review

Modeling the spatial distribution of larval fish abundance provides essential information for management

Kallasvuo, M., Vanhatalo, J. & Veneranta, L., May 2017, In : Canadian Journal of Fisheries and Aquatic Sciences. 74, 5, p. 636-649 14 p.

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mlplasmids: a user-friendly tool to predict plasmid- and chromosome-derived sequences for single species

Arredondo-Alonso, S., Rogers, M. R. C., Braat, J. C., Verschuuren, T. D., Top, J., Corander, J., Willems, R. J. L. & Schürch, A. C., 1 Nov 2018, In : Microbial Genomics. 4, 11, 15 p., 000224.

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Missing value imputation in longitudinal measures of alcohol consumption

Grittner, U., Gmel, G., Ripatti, S., Bloomfield, K. & Wicki, M., 2011, In : International Journal of Methods in Psychiatric Research. 20, 1, p. 50-61 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Missing-Feature Reconstruction With a Bounded Nonlinear State-Space Model

Remes, U., Palomaki, K. J., Raiko, T., Honkela, A. & Kurimo, M., 2011, In : IEEE Signal Processing Letters. 18, 10, p. 563-566 4 p.

Research output: Contribution to journalArticleScientificpeer-review

metaCCA: summary statistics-based multivariate meta-analysis of genome-wide association studies using canonical correlation analysis

Cichonska, A., Rousu, J., Marttinen, P., Kangas, A. J., Soininen, P., Lehtimaki, T., Raitakari, O. T., Jarvelin, M-R., Salomaa, V., Ala-Korpela, M., Ripatti, S. & Pirinen, M., 1 Jul 2016, In : Bioinformatics. 32, 13, p. 1981-1989 9 p.

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Metabonomic, transcriptomic, and genomic variation of a population cohort

Inouye, M., Kettunen, J., Soininen, P., Silander, K., Ripatti, S., Kumpula, L. S., Hämäläinen, E., Jousilahti, P., Kangas, A. J., Männistö, S., Savolainen, M. J., Jula, A., Leiviskä, J., Palotie, A., Salomaa, V., Perola, M., Ala-Korpela, M. & Peltonen, L., 2010, In : Molecular Systems Biology. 6, art.no 441

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