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Clinical isolates of Yersinia enterocolitica Biotype 1A represent two phylogenetic lineages with differing pathogenicity-related properties

Sihvonen, L. M., Jalkanen, K., Huovinen, E., Toivonen, S., Corander, J., Kuusi, M., Skurnik, M., Siitonen, A. & Haukka, K., 2012, In : BMC Microbiology. 12, 24 p., 208.

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Coding haplotype analysis supports HCR as the putative susceptibility gene for psoriasis at the MHC PSORS1 locus

Asumalahti, K., Veal, C., Laitinen, T., Suomela, S., Allen, M., Elomaa, O., Moser, M., de Cid, R., Ripatti, S., Vorechovsky, I., Marcusson, J. A., Nakagawa, H., Lazaro, C., Estivill, X., Capon, F., Novelli, G., Saarialho-Kere, U., Barker, J., Trembath, R., Kere, J. & 1 others, Psoriasis Consortium, 2002, In : Human Molecular Genetics. 2002, 11, p. 589-597 9 p.

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Coexistence of the social types: Genetic population structure in the ant Formica exsecta

Seppä, P., Gyllenstrand, N., Corander, J. & Pamilo, P., 2004, In : Evolution. 58, 11, p. 2462-2471 10 p.

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Combined Analysis of Variation in Core, Accessory and Regulatory Genome Regions Provides a Super-Resolution View into the Evolution of Bacterial Populations

McNally, A., Oren, Y., Kelly, D., Pascoe, B., Dunn, S., Sreecharan, T., Vehkala, M., Välimäki, N., Prentice, M. B., Ashour, A., Avram, O., Pupko, T., Dobrindt, U., Literak, I., Guenther, S., Schaufler, K., Wieler, L. H., Zong Zhiyong, Sheppard, S. K., McInerney, J. O. & 1 others, Corander, J., Sep 2016, In : PLoS Genetics. 12, 9, 16 p., 1006280.

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Common variant at 16p11.2 conferring risk of psychosis

Steinberg, S., de Jong, S., Mattheisen, M., Costas, J., Demontis, D., Jamain, S., Pietiläinen, O. P. H., Lin, K., Papiol, S., Huttenlocher, J., Sigurdsson, E., Vassos, E., Giegling, I., Breuer, R., Fraser, G., Walker, N., Melle, I., Djurovic, S., Agartz, I., Tuulio-Henriksson, A. & 32 others, Suvisaari, J., Lönnqvist, J., Paunio, T., Olsen, L., Hansen, T., Ingason, A., Pirinen, M., Strengman, E., Hougaard, D. M., Orntoft, T., Didriksen, M., Hollegaard, M. V., Nordentoft, M., Abramova, L., Kaleda, V., Arrojo, M., Sanjuan, J., Arango, C., Etain, B., Bellivier, F., Meary, A., Schuerhoff, F., Szoke, A., Ribolsi, M., Magni, V., Siracusano, A., Sperling, S., Rehnstrom, K., Kilpinen, L. H., Palotie, A., GROUP & Wellcome Trust Case Control Consor, Jan 2014, In : Molecular Psychiatry. 19, 1, p. 108-114 7 p.

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Common Variant Burden Contributes to the Familial Aggregation of Migraine in 1,589 Families

23 Me Res Team, IHGC, Gormley, P., Kurki, M. I., Hiekkala, M. E., Häppölä, P., Palta, P., Surakka, I., Kaunisto, M. A., Hämäläinen, E., Vepsäläinen, S., Havanka, H., Harno, H., Ilmavirta, M., Nissilä, M., Säkö, E., Sumelahti, M-L., Liukkonen, J., Sillanpaa, M., Metsähonkala, L. & 15 others, Koskinen, S., Lehtimaki, T., Raitakari, O., Männikko, M., Jousilahti, P., Anttila, V., Salomaa, V., Artto, V., Färkkilä, M., Daly, M. J., Neale, B. M., Ripatti, S., Kallela, M., Wessman, M. & Palotie, A., 16 May 2018, In : Neuron. 98, 4, p. 743–753 11 p.

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Common variants associated with plasma triglycerides and risk for coronary artery disease

Do, R., Willer, C. J., Schmidt, E. M., Sengupta, S., Gao, C., Peloso, G. M., Gustafsson, S., Kanoni, S., Ganna, A., Chen, J., Buchkovich, M. L., Mora, S., Beckmann, J. S., Bragg-Gresham, J. L., Chang, H-Y., Demirkan, A., Den Hertog, H. M., Donnelly, L. A., Ehret, G. B., Esko, T. & 243 others, Feitosa, M. F., Ferreira, T., Fischer, K., Fontanillas, P., Fraser, R. M., Freitag, D. F., Gurdasani, D., Heikkilä, K., Hyppoenen, E., Isaacs, A., Jackson, A. U., Johansson, A., Johnson, T., Kaakinen, M., Kettunen, J., Kleber, M. E., Li, X., Luan, J., Lyytikainen, L-P., Magnusson, P. K. E., Mangino, M., Mihailov, E., Montasser, M. E., Mueller-Nurasyid, M., Nolte, I. M., O'Connell, J. R., Palmer, C. D., Perola, M., Petersen, A-K., Sanna, S., Saxena, R., Service, S. K., Shah, S., Shungin, D., Sidore, C., Song, C., Strawbridge, R. J., Surakka, I., Tanaka, T., Teslovich, T. M., Thorleifsson, G., Van den Herik, E. G., Voight, B. F., Volcik, K. A., Waite, L. L., Wong, A., Wu, Y., Zhang, W., Absher, D., Asiki, G., Barroso, I., Been, L. F., Bolton, J. L., Bonnycastle, L. L., Brambilla, P., Burnett, M. S., Cesana, G., Dimitriou, M., Doney, A. S. F., Doering, A., Elliott, P., Epstein, S. E., Eyjolfsson, G. I., Gigante, B., Goodarzi, M. O., Grallert, H., Gravito, M. L., Groves, C. J., Hallmans, G., Hartikainen, A-L., Hayward, C., Hernandez, D., Hicks, A. A., Holm, H., Hung, Y-J., Illig, T., Jones, M. R., Kaleebu, P., Kastelein, J. J. P., Khaw, K-T., Kim, E., Klopp, N., Komulainen, P., Kumari, M., Langenberg, C., Lehtimaki, T., Lin, S-Y., Lindstrom, J., Loos, R. J. F., Mach, F., McArdle, W. L., Meisinger, C., Mitchell, B. D., Mueller, G., Nagaraja, R., Narisu, N., Nieminen, T. V. M., Nsubuga, R. N., Olafsson, I., Ong, K. K., Palotie, A., Papamarkou, T., Pomilla, C., Pouta, A., Rader, D. J., Reilly, M. P., Ridker, P. M., Rivadeneira, F., Rudan, I., Ruokonen, A., Samani, N., Scharnagl, H., Seeley, J., Silander, K., Stancakova, A., Stirrups, K., Swift, A. J., Tiret, L., Uitterlinden, A. G., van Pelt, L. J., Vedantam, S., Wainwright, N., Wijmenga, C., Wild, S. H., Willemsen, G., Wilsgaard, T., Wilson, J. F., Young, E. H., Zhao, J. H., Adair, L. S., Arveiler, D., Assimes, T. L., Bandinelli, S., Bennett, F., Bochud, M., Boehm, B. O., Boomsma, D. I., Borecki, I. B., Bornstein, S. R., Bovet, P., Burnier, M., Campbell, H., Chakravarti, A., Chambers, J. C., Chen, Y-D. I., Collins, F. S., Cooper, R. S., Danesh, J., Dedoussis, G., de Faire, U., Feranil, A. B., Ferrieres, J., Ferrucci, L., Freimer, N. B., Gieger, C., Groop, L. C., Gudnason, V., Gyllensten, U., Hamsten, A., Harris, T. B., Hingorani, A., Hirschhorn, J. N., Hofman, A., Hovingh, G. K., Hsiung, C. A., Humphries, S. E., Hunt, S. C., Hveem, K., Iribarren, C., Jarvelin, M-R., Jula, A., Kahonen, M., Kaprio, J., Kesaniemi, A., Kivimaki, M., Kooner, J. S., Koudstaal, P. J., Krauss, R. M., Kuh, D., Kuusisto, J., Kyvik, K. O., Laakso, M., Lakka, T. A., Lind, L., Lindgren, C. M., Martin, N. G., Maerz, W., McCarthy, M. I., McKenzie, C. A., Meneton, P., Metspalu, A., Moilanen, L., Morris, A. D., Munroe, P. B., Njolstad, I., Pedersen, N. L., Power, C., Pramstaller, P. P., Price, J. F., Psaty, B. M., Quertermous, T., Rauramaa, R., Saleheen, D., Salomaa, V., Sanghera, D. K., Saramies, J., Schwarz, P. E. H., Sheu, W. H-H., Shuldiner, A. R., Siegbahn, A., Spector, T. D., Stefansson, K., Strachan, D. P., Tayo, B. O., Tremoli, E., Tuomilehto, J., Uusitupa, M., van Duijn, C. M., Vollenweider, P., Wallentin, L., Wareham, N. J., Whitfield, J. B., Wolffenbuttel, B. H. R., Altshuler, D., Ordovas, J. M., Boerwinkle, E., Palmer, C. N. A., Thorsteinsdottir, U., Chasman, D. I., Rotter, J. I., Franks, P. W., Ripatti, S., Cupples, L. A., Sandhu, M. S., Rich, S. S., Boehnke, M., Deloukas, P., Mohlke, K. L., Ingelsson, E., Abecasis, G. R., Daly, M. J., Neale, B. M. & Kathiresan, S., Nov 2013, In : Nature Genetics. 45, 11, p. 1345-+ 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Common variants at ten genomic loci influence hemoglobin A1(C ) levels via glycemic and non-glycemic pathways

Procardis Consortium, WTCCC & Groop, L. C., Sep 2010, In : Diabetes-Journal. 2010/59, 12, p. 3229-39 11 p.

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Common variants at the MHC locus and at chromosome 16q24.1 predispose to Barrett's esophagus

Su, Z., Gay, L. J., Strange, A., Palles, C., Band, G., Whiteman, D. C., Lescai, F., Langford, C., Nanji, M., Edkins, S., van der Winkel, A., Levine, D., Sasieni, P., Bellenguez, C., Howarth, K., Freeman, C., Trudgill, N., Tucker, A. T., Pirinen, M., Peppelenbosch, M. P. & 32 others, van der Laan, L. J. W., Kuipers, E. J., Drenth, J. P. H., Peters, W. H., Reynolds, J. V., Kelleher, D. P., McManus, R., Grabsch, H., Prenen, H., Bisschops, R., Krishnadath, K., Siersema, P. D., van Baal, J. W. P. M., Middleton, M., Petty, R., Gillies, R., Burch, N., Bhandari, P., Paterson, S., Edwards, C., Penman, I., Vaidya, K., Ang, Y., Murray, I., Patel, P., Ye, W., Mullins, P., Wu, A. H., Rautanen, A., Palotie, L., Esophageal Adenocarcinoma Genetics & Wellcome Trust Case Control Consor, Oct 2012, In : Nature Genetics. 44, 10, p. 1131-1136 6 p.

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Common variants in the HLA-DRB1-HLA-DQA1 HLA class II region are associated with susceptibility to visceral leishmaniasis

Fakiola, M., Strange, A., Cordell, H. J., Miller, E. N., Pirinen, M., Su, Z., Mishra, A., Mehrotra, S., Monteiro, G. R., Band, G., Bellenguez, C., Dronov, S., Edkins, S., Freeman, C., Giannoulatou, E., Gray, E., Hunt, S. E., Lacerda, H. G., Langford, C., Pearson, R. & 33 others, Pontes, N. N., Rai, M., Singh, S. P., Smith, L., Sousa, O., Vukcevic, D., Bramon, E., Brown, M. A., Casas, J. P., Corvin, A., Duncanson, A., Jankowski, J., Markus, H. S., Mathew, C. G., Palmer, C. N. A., Plomin, R., Rautanen, A., Sawcer, S. J., Trembath, R. C., Viswanathan, A. C., Wood, N. W., Wilson, M. E., Deloukas, P., Palotie, L., Christiansen, F., Witt, C., Jeronimo, S. M. B., Sundar, S., Spencer, C. C. A., Blackwell, J. M., Donnelly, P., LeishGEN Consortium & Wellcome Trust Case Control, Feb 2013, In : Nature Genetics. 45, 2, p. 208-213 6 p.

Research output: Contribution to journalArticleScientificpeer-review

Computing exact clustering posteriors with subset convolution

Kohonen, J. & Corander, J., 2016, In : Communications in Statistics: Theory and Methods. 45, 10, p. 3048-3058 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Conditional models accounting for regression to the mean in observational multi-wave panel studies on alcohol consumption

Ripatti, S. & Makela, P., 2008, In : Addiction Biology. 103, p. 24-31 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Context-specific independence in graphical log-linear models

Nyman, H., Pensar, J., Koski, T. & Corander, J., Dec 2016, In : Computational Statistics. 31, 4, p. 1493-1512 20 p.

Research output: Contribution to journalArticleScientificpeer-review

Contribution of rare and common variants to intellectual disability in a sub-isolate of Northern Finland

Kurki, M. I., Saarentaus, E. C., Pietiläinen, O., Gormley, P., Lal, D., Kerminen, S., Torniainen-Holm, M., Hämäläinen, E., Rahikkala, E., Keski-Filppula, R., Rauhala, M., Korpi-Heikkila, S., Komulainen-Ebrahim, J., Helander, H., Vieira, P., Männikkö, M., Peltonen, M., Havulinna, A., Salomaa, V., Pirinen, M. & 6 others, Suvisaari, J., Moilanen, J. S., Körkkö, J., Kuismin, O., Daly, M. & Palotie, A., 24 Jan 2019, In : Nature Communications. 10, 1, 15 p., 410.

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Core Genome Multilocus Sequence Typing Scheme for High-Resolution Typing of Enterococcus faecium

de Been, M., Pinholt, M., Top, J., Bletz, S., Mellmann, A., van Schaik, W., Brouwer, E., Rogers, M., Kraat, Y., Bonten, M., Corander, J., Westh, H., Harmsen, D. & Willems, R. J. L., Dec 2015, In : Journal of Clinical Microbiology. 53, 12, p. 3788-3797 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Coronary Artery Disease Risk and Lipidomic Profiles Are Similar in Hyperlipidemias With Family History and Population-Ascertained Hyperlipidemias

Ramo, J. T., Ripatti, P., Tabassum, R., Soderlund, S., Matikainen, N., Gerl, M. J., Klose, C., Surma, M. A., Stitziel, N. O., Havulinna, A. S., Pirinen, M., Salomaa, V., Freimer, N. B., Jauhiainen, M., Palotie, A., Taskinen, M-R., Simons, K. & Ripatti, S., 2 Jul 2019, In : Journal of the American Heart Association. 8, 13, 38 p., 012415.

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Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis

Sieberts, S. K., Zhu, F., Garcia-Garcia, J., Stahl, E., Pratap, A., Pandey, G., Pappas, D., Aguilar, D., Anton, B., Bonet, J., Eksi, R., Fornes, O., Guney, E., Li, H., Marin, M. A., Panwar, B., Planas-Iglesias, J., Poglayen, D., Cui, J., Falcao, A. O. & 31 others, Suver, C., Hoff, B., Balagurusamy, V. S. K., Dillenberger, D., Neto, E. C., Norman, T., Aittokallio, T., Ammad-ud-din, M., Azencott, C-A., Bellon, V., Boeva, V., Bunte, K., Chheda, H., Cheng, L., Corander, J., Dumontier, M., Goldenberg, A., Gopalacharyulu, P., Hajiloo, M., Hidru, D., Jaiswal, A., Kaski, S., Khalfaoui, B., Khan, S. A., Kramer, E. R., Marttinen, P., Pirinen, M., Saarela, J., Tang, J., Wennerberg, K. & Rheumatoid Arth Challenge, Aug 2016, In : Nature Communications. 7, 9 p., 12460.

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Cryptic ecology among host generalist Campylobacter jejuni in domestic animals

Sheppard, S. K., Cheng, L., Meric, G., De Haan, C. P. A., Llarena, A-K., Marttinen, P., Vidal, A., Ridley, A., Clifton-Hadley, F., Connor, T. R., Strachan, N. J. C., Forbes, K., Colles, F. M., Jolley, K. A., Bentley, S. D., Maiden, M. C. J., Hänninen, M-L., Parkhill, J., Hanage, W. P. & Corander, J., May 2014, In : Molecular Ecology. 23, 10, p. 2442-2451 10 p.

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CYP2D6 worldwide genetic variation shows high frequency of altered activity variants and no continental structure

Sistonen, J., Sajantila, A., Lao, O., Corander, J., Barbujani, G. & Fuselli, S., 2007, In : Pharmacogenetics and Genomics. 17, 2, p. 93-101 9 p.

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Deep-coverage whole genome sequences and blood lipids among 16,324 individuals

NHLBI TOPMED Lipids Working Grp, 23 Aug 2018, In : Nature Communications. 9, 12 p., 3391.

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Deletion of TOP3 beta, a component of FMRP-containing mRNPs, contributes to neurodevelopmental disorders

Stoll, G., Pietiläinen, O., Linder, B., Suvisaari, J., Brosi, C., Hennah, W., Leppä, V. M., Torniainen, M., Ripatti, S., Ala-Mello, S., Plottner, O., Rehnstrom, K., Tuulio-Henriksson, A., Varilo, T., Tallila, J., Kristiansson, K., Isohanni, M., Kaprio, J., Eriksson, J. G., Raitakari, O. T. & 13 others, Lehtimaki, T., Jarvelin, M-R., Salomaa, V., Hurles, M., Stefansson, H., Palotie, L., Sullivan, P. F., Paunio, T., Lönnqvist, J., Daly, M. J., Fischer, U., Freimer, N. B. & Palotie, A., Sep 2013, In : Nature Neuroscience. 16, 9, p. 1228-U99 13 p.

Research output: Contribution to journalArticleScientificpeer-review

Dense genomic sampling identifies highways of pneumococcal recombination

Chewapreecha, C., Harris, S. R., Croucher, N. J., Turner, C., Marttinen, P., Cheng, L., Pessia, A., Aanensen, D. M., Mather, A. E., Page, A. J., Salter, S. J., Harris, D., Nosten, F., Goldblatt, D., Corander, J., Parkhill, J., Turner, P. & Bentley, S. D., Mar 2014, In : Nature Genetics. 46, 3, p. 305-+ 7 p.

Research output: Contribution to journalArticleScientificpeer-review

Description of Klebsiella spallanzanii sp. nov. and of Klebsiella pasteurii sp. nov.

Merla, C., Rodrigues, C., Passet, V., Corbella, M., Thorpe, H. A., Kallonen, T. V. S., Zong, Z., Marone, P., Bandi, C., Sassera, D., Corander, J., Feil, E. J. & Brisse, S., 25 Oct 2019, In : Frontiers in Microbiology. 10, 9 p., 2360.

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Detailed metabolic and genetic characterization reveals new associations for 30 known lipid loci

Tukiainen, T., Kettunen, J., Kangas, A. J., Lyytikainen, L-P., Soininen, P., Sarin, A-P., Tikkanen, E., O'Reilly, P. F., Savolainen, M. J., Kaski, K., Pouta, A., Jula, A., Lehtimaki, T., Kahonen, M., Viikari, J., Taskinen, M-R., Jauhiainen, M., Eriksson, J. G., Raitakari, O., Salomaa, V. & 5 others, Jarvelin, M-R., Perola, M., Palotie, A., Ala-Korpela, M. & Ripatti, S., 2012, In : Human Molecular Genetics. 21, 6, p. 1444-1455 12 p.

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Detailed temperature mapping-Warming characterizes archipelago zones

Veneranta, L., Vanhatalo, J. & Urho, L., 5 Dec 2016, In : Estuarine, Coastal and Shelf Science. 182, p. 123-135 13 p.

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Detection of recombination events in bacterial genomes from large population samples

Marttinen, P., Hanage, W. P., Croucher, N. J., Connor, T. R., Harris, S. R., Bentley, S. D. & Corander, J., 2012, In : Nucleic Acids Research. 40, 1, p. e6 12 p.

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Determinants of changes in bone density: A 5-year follow-up study of adult male monozygotic twins

Videman, T., Battie, M. C., Ripatti, S. O., Jurvelin, J., Vanninen, E. & Kaprio, J., 2007, In : Journal of Clinical Densitometry. 10, 4, p. 408-414 7 p.

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Determinants of the progression in lumbar degeneration - A 5-year follow-up study of adult male monozygotic twins

Videman, T., Battie, M. C., Ripatti, S., Gill, K., Manninen, H. & Kaprio, J., 2006, In : Spine. 31, 6, p. 671-678 8 p.

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Diagnostic efficacy of myeloperoxidase to identify acute coronary syndrome in subjects with chest pain

Graner, M., Tikkanen, E., Rimpilä, O., Tikkanen, H., Ripatti, S., Lokki, M-L., Nieminen, M. S., Taskinen, M-R. & Sinisalo, J., Jun 2013, In : Annals of Medicine. 45, 4, p. 322-327 6 p.

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Differences in bacterial community composition in Baltic Sea sediment in response to fish farming

Tamminen, M., Karkman, A., Corander, J., Paulin, L. G. & Virta, M., 2011, In : Aquaculture. 313, p. 15-23

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Discovery and Fine-Mapping of Glycaemic and Obesity-Related Trait Loci Using High-Density Imputation

Horikoshi, M., Maegi, R., van de Bunt, M., Surakka, I., Sarin, A-P., Mahajan, A., Marullo, L., Thorleifsson, G., Haegg, S., Hottenga, J-J., Ladenvall, C., Ried, J. S., Winkler, T. W., Willems, S. M., Tsernikova, N., Esko, T., Beekman, M., Nelson, C. P., Willenborg, C., Wiltshire, S. & 31 others, Ferreira, T., Fernandez, J., Gaulton, K. J., Steinthorsdottir, V., Hamsten, A., Magnusson, P. K. E., Willemsen, G., Milaneschi, Y., Robertson, N. R., Groves, C. J., Bennett, A. J., Lehtimaeki, T., Viikari, J. S., Rung, J., Lyssenko, V., Perola, M., Heid, I. M., Herder, C., Grallert, H., Mueller-Nurasyid, M., Roden, M., Hypponen, E., Isaacs, A., van Leeuwen, E. M., Karssen, L. C., Mihailov, E., Kaprio, J., Eriksson, J. G., Groop, L., Ripatti, S. & Engage Consortium, Jul 2015, In : PLoS Genetics. 11, 7, 24 p., 1005230.

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Discovery and refinement of loci associated with lipid levels

Willer, C. J., Schmidt, E. M., Sengupta, S., Peloso, G. M., Gustafsson, S., Kanoni, S., Ganna, A., Chen, J., Buchkovich, M. L., Mora, S., Beckmann, J. S., Bragg-Gresham, J. L., Chang, H-Y., Demirkan, A., Den Hertog, H. M., Do, R., Donnelly, L. A., Ehret, G. B., Esko, T., Feitosa, M. F. & 240 others, Ferreira, T., Fischer, K., Fontanillas, P., Fraser, R. M., Freitag, D. F., Gurdasani, D., Heikkilä, K. V., Hyppoenen, E., Isaacs, A., Jackson, A. U., Johansson, A., Johnson, T., Kaakinen, M., Kettunen, J., Kleber, M. E., Li, X., Luan, J., Lyytikainen, L-P., Magnusson, P. K. E., Mangino, M., Mihailov, E., Montasser, M. E., Mueller-Nurasyid, M., Nolte, I. M., O'Connell, J. R., Palmer, C. D., Perola, M., Petersen, A-K., Sanna, S., Saxena, R., Service, S. K., Shah, S., Shungin, D., Sidore, C., Song, C., Strawbridge, R. J., Surakka, I., Tanaka, T., Teslovich, T. M., Thorleifsson, G., Van den Herik, E. G., Voight, B. F., Volcik, K. A., Waite, L. L., Wong, A., Wu, Y., Zhang, W., Absher, D., Asiki, G., Barroso, I., Been, L. F., Bolton, J. L., Bonnycastle, L. L., Brambilla, P., Burnett, M. S., Cesana, G., Dimitriou, M., Doney, A. S. F., Doering, A., Elliott, P., Epstein, S. E., Eyjolfsson, G. I., Gigante, B., Goodarzi, M. O., Grallert, H., Gravito, M. L., Groves, C. J., Hallmans, G., Hartikainen, A-L., Hayward, C., Hernandez, D., Hicks, A. A., Holm, H., Hung, Y-J., Illig, T., Jones, M. R., Kaleebu, P., Kastelein, J. J. P., Khaw, K-T., Kim, E., Klopp, N., Komulainen, P., Kumari, M., Langenberg, C., Lehtimaki, T., Lin, S-Y., Lindstrom, J., Loos, R. J. F., Mach, F., McArdle, W. L., Meisinger, C., Mitchell, B. D., Mueller, G., Nagaraja, R., Narisu, N., Nieminen, T. V. M., Nsubuga, R. N., Olafsson, I., Ong, K. K., Palotie, A., Papamarkou, T., Pomilla, C., Pouta, A., Rader, D. J., Reilly, M. P., Ridker, P. M., Rivadeneira, F., Rudan, I., Ruokonen, A., Samani, N., Scharnagl, H., Seeley, J., Silander, K., Stancakova, A., Stirrups, K., Swift, A. J., Tiret, L., Uitterlinden, A. G., van Pelt, L. J., Vedantam, S., Wainwright, N., Wijmenga, C., Wild, S. H., Willemsen, G., Wilsgaard, T., Wilson, J. F., Young, E. H., Zhao, J. H., Adair, L. S., Arveiler, D., Assimes, T. L., Bandinelli, S., Bennett, F., Bochud, M., Boehm, B. O., Boomsma, D. I., Borecki, I. B., Bornstein, S. R., Bovet, P., Burnier, M., Campbell, H., Chakravarti, A., Chambers, J. C., Chen, Y-D. I., Collins, F. S., Cooper, R. S., Danesh, J., Dedoussis, G., de Faire, U., Feranil, A. B., Ferrieres, J., Ferrucci, L., Freimer, N. B., Gieger, C., Groop, L. C., Gudnason, V., Gyllensten, U., Hamsten, A., Harris, T. B., Hingorani, A., Hirschhorn, J. N., Hofman, A., Hovingh, G. K., Hsiung, C. A., Humphries, S. E., Hunt, S. C., Hveem, K., Iribarren, C., Jarvelin, M-R., Jula, A., Kahonen, M., Kaprio, J., Kesaniemi, A., Kivimäki, M., Kooner, J. S., Koudstaal, P. J., Krauss, R. M., Kuh, D., Kuusisto, J., Kyvik, K. O., Laakso, M., Lakka, T. A., Lind, L., Lindgren, C. M., Martin, N. G., Maerz, W., McCarthy, M. I., McKenzie, C. A., Meneton, P., Metspalu, A., Moilanen, L., Morris, A. D., Munroe, P. B., Njolstad, I., Pedersen, N. L., Power, C., Pramstaller, P. P., Price, J. F., Psaty, B. M., Quertermous, T., Rauramaa, R., Saleheen, D., Salomaa, V., Sanghera, D. K., Saramies, J., Schwarz, P. E. H., Sheu, W. H-H., Shuldiner, A. R., Siegbahn, A., Spector, T. D., Stefansson, K., Strachan, D. P., Tayo, B. O., Tremoli, E., Tuomilehto, J., Uusitupa, M., van Duijn, C. M., Vollenweider, P., Wallentin, L., Wareham, N. J., Whitfield, J. B., Wolffenbuttel, B. H. R., Ordovas, J. M., Boerwinkle, E., Palmer, C. N. A., Thorsteinsdottir, U., Chasman, D. I., Rotter, J. I., Franks, P. W., Ripatti, S., Cupples, L. A., Sandhu, M. S., Rich, S. S., Boehnke, M., Deloukas, P., Kathiresan, S., Mohlke, K. L., Ingelsson, E., Abecasis, G. R. & Global Lipids Genetics Consortium, Nov 2013, In : Nature Genetics. 45, 11, p. 1274-+ 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Disentangling the genetics of lean mass

Karasik, D., Zillikens, M. C., Hsu, Y-H., Aghdassi, A., Akesson, K., Amin, N., Barroso, I., Bennett, D. A., Bertram, L., Bochud, M., Borecki, I. B., Broer, L., Buchman, A. S., Byberg, L., Campbell, H., Campos-Obando, N., Cauley, J. A., Cawthon, P. M., Chambers, J. C., Chen, Z. & 137 others, Cho, N. H., Choi, H. J., Chou, W-C., Cummings, S. R., de Groot, L. C. P. G. M., De Jager, P. L., Demuth, I., Diatchenko, L., Econs, M. J., Eiriksdottir, G., Enneman, A. W., Eriksson, J., Eriksson, J. G., Estrada, K., Evans, D. S., Feitosa, M. F., Fu, M., Gieger, C., Grallert, H., Gudnason, V., Lenore, L. J., Hayward, C., Hofman, A., Homuth, G., Huffman, K. M., Husted, L. B., Illig, T., Ingelsson, E., Ittermann, T., Jansson, J-O., Johnson, T., Biffar, R., Jordan, J. M., Jula, A., Karlsson, M., Khaw, K-T., Kilpelainen, T. O., Klopp, N., Kloth, J. S. L., Koller, D. L., Kooner, J. S., Kraus, W. E., Kritchevsky, S., Kutalik, Z., Kuulasmaa, T., Kuusisto, J., Laakso, M., Lahti, J., Lang, T., Langdahl, B. L., Lerch, M. M., Lewis, J. R., Lill, C., Lind, L., Lindgren, C., Liu, Y., Livshits, G., Ljunggren, O., Loos, R. J. F., Lorentzon, M., Luan, J., Luben, R. N., Malkin, I., McGuigan, F. E., Medina-Gomez, C., Meitinger, T., Melhus, H., Mellstrom, D., Michaelsson, K., Mitchell, B. D., Morris, A. P., Mosekilde, L., Nethander, M., Newman, A. B., O'Connell, J. R., Oostra, B. A., Orwoll, E. S., Palotie, A., Peacock, M., Perola, M., Peters, A., Prince, R. L., Psaty, B. M., Räikkönen, K., Ralston, S. H., Ripatti, S., Rivadeneira, F., Robbins, J. A., Rotter, J. I., Rudan, I., Salomaa, V., Satterfield, S., Schipf, S., Shin, C. S., Smith, A. V., Smith, S. B., Soranzo, N., Spector, T. D., Stancakova, A., Stefansson, K., Steinhagen-Thiessen, E., Stolk, L., Streeten, E. A., Styrkarsdottir, U., Swart, K. M. A., Thompson, P., Thomson, C. A., Thorleifsson, G., Thorsteinsdottir, U., Tikkanen, E., Tranah, G. J., Uitterlinden, A. G., van Duijn, C. M., van Schoor, N. M., Vandenput, L., Vollenweider, P., Volzke, H., Wactawski-Wende, J., Walker, M., Wareham, N. J., Waterworth, D., Weedon, M. N., Wichmann, H-E., Widen, E., Williams, F. M. K., Wilson, J. F., Wright, N. C., Yerges-Armstrong, L. M., Yu, L., Zhang, W., Zhao, J. H., Zhou, Y., Nielson, C. M., Harris, T. B., Demissie, S., Kiel, D. P. & Ohlsson, C., Feb 2019, In : American Journal of Clinical Nutrition. 109, 2, p. 276-287 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Distinct Variants at LIN28B Influence Growth in Height from Birth to Adulthood

Widen, E., Ripatti, S., Cousminer, D. L., Surakka, I., Lappalainen, T., Jaervelin, M-R., Eriksson, J. G., Raitakari, O., Salomaa, V., Sovio, U., Hartikainen, A-L., Pouta, A., McCarthy, M. I., Osmond, C., Kajantie, E., Lehtimaki, T., Viikari, J., Kahonen, M., Tyler-Smith, C., Freimer, N. & 3 others, Hirschhorn, J. N., Peltonen, L. & Palotie, A., 2010, In : American Journal of Human Genetics. 86, 5, p. 773-782 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Distribution and Medical Impact of Loss-of-Function Variants in the Finnish Founder Population

Sequencing Initiative Suomi, 1 Jul 2014, In : PLoS Genetics. 10, 7, 12 p., 1004494.

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Diversification of Colonization Factors in a Multidrug-Resistant Escherichia coli Lineage Evolving under Negative Frequency-Dependent Selection

McNally, A., Kallonen, T., Connor, C., Abudahab, K., Aanensen, D. M., Horner, C., Peacock, S. J., Parkhill, J., Croucher, N. J. & Corander, J., 30 Apr 2019, In : mBio. 10, 2, p. e00644-19

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Does expecting more pain make it more intense? Factors associated with the first week pain trajectories after breast cancer surgery

Sipila, R. M., Haasio, L., Meretoja, T. J., Ripatti, S., Estlander, A-M. & Kalso, E. A., May 2017, In : Pain. 158, 5, p. 922-930 9 p.

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Doubly Stochastic Neighbor Embedding on Spheres

Lu, Y., Corander, J. & Yang, Z., 1 Dec 2019, In : Pattern Recognition Letters. 128, p. 100-106 7 p.

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Downscaling and extrapolating dynamic seasonal marine forecasts for coastal ocean users

Vanhatalo, J. P., Hobday, A. J., Little, L. R. & Spillman, C. M., Apr 2016, In : Ocean Modelling. 100, p. 20-30 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Ecological Overlap and Horizontal Gene Transfer in Staphylococcus aureus and Staphylococcus epidermidis

Meric, G., Miragaia, M., de Been, M., Yahara, K., Pascoe, B., Mageiros, L., Mikhail, J., Harris, L. G., Wilkinson, T. S., Rolo, J., Lamble, S., Bray, J. E., Jolley, K. A., Hanage, W. P., Bowden, R., Maiden, M. C. J., Mack, D., de Lencastre, H., Feil, E. J., Corander, J. & 1 others, Sheppard, S. K., May 2015, In : Genome Biology and Evolution. 7, 5, p. 1313-1328 16 p.

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Educational differences in lung cancer mortality in male smokers

Martikainen, P., Lahelma, E., Ripatti, S., Albanes, D. & Virtamo, J., 2001, In : International Journal of Epidemiology. 30, p. 264-267 4 p.

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Effect of Catechol-o-methyltransferase-gene (COMT) Variants on Experimental and Acute Postoperative Pain in 1,000 Women undergoing Surgery for Breast Cancer

Kambur, O., Kaunisto, M., Tikkanen, E., Leal, S., Ripatti, S. O. & Kalso, E., Dec 2013, In : Anesthesiology. 119, 6, p. 1422-1433 12 p.

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Effect of Five Genetic Variants Associated with Lung Function on the Risk of Chronic Obstructive Lung Disease, and Their Joint Effects on Lung Function

Artigas, M. S., Wain, L. V., Repapi, E., Obeidat, M., Sayers, I., Burton, P. R., Johnson, T., Zhao, J. H., Albrecht, E., Dominiczak, A. F., Kerr, S. M., Smith, B. H., Cadby, G., Hui, J., Palmer, L. J., Hingorani, A. D., Wannamethee, S. G., Whincup, P. H., Ebrahim, S., Smith, G. D. & 31 others, Barroso, I., Loos, R. J. F., Wareham, N. J., Cooper, C., Dennison, E., Shaheen, S. O., Liu, J. Z., Marchini, J., Dahgam, S., Naluai, A. T., Olin, A-C., Karrasch, S., Heinrich, J., Schulz, H., McKeever, T. M., Pavord, I. D., Heliovaara, M., Ripatti, S., Surakka, I., Blakey, J. D., Kahonen, M., Britton, J. R., Nyberg, F., Holloway, J. W., Lawlor, D. A., Morris, R. W., James, A. L., Jackson, C. M., Hall, I. P., Tobin, M. D. & SpiroMeta Consortium, Med Res Council Natl Survey Hlth D, 2011, In : American Journal of Respiratory and Critical Care Medicine. 184, 7, p. 786-795 10 p.

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Effect of Insulin Resistance on Monounsaturated Fatty Acid Levels: A Multi-cohort Non-targeted Metabolomics and Mendelian Randomization Study

Nowak, C., Salihovic, S., Ganna, A., Brandmaier, S., Tukiainen, T., Broeckling, C. D., Magnusson, P. K., Prenni, J. E., Wang-Sattler, R., Peters, A., Strauch, K., Meitinger, T., Giedraitis, V., Arnlov, J., Berne, C., Gieger, C., Ripatti, S., Lind, L., Pedersen, N. L., Sundstrom, J. & 2 others, Ingelsson, E. & Fall, T., Oct 2016, In : PLoS Genetics. 12, 10, 19 p., 1006379.

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Effect of predicted protein-truncating genetic variants on the human transcriptome

Rivas, M. A., Pirinen, M., Conrad, D. F., Lek, M., Tsang, E. K., Karczewski, K. J., Maller, J. B., Kukurba, K. R., DeLuca, D. S., Fromer, M., Ferreira, P. G., Smith, K. S., Zhang, R., Zhao, F., Banks, E., Poplin, R., Ruderfer, D. M., Purcell, S. M., Tukiainen, T., Minikel, E. V. & 19 others, Stenson, P. D., Cooper, D. N., Huang, K. H., Sullivan, T. J., Nedzel, J., Bustamante, C. D., Li, J. B., Daly, M. J., Guigo, R., Donnelly, P., Ardlie, K., Sammeth, M., Dermitzakis, E. T., McCarthy, M. I., Montgomery, S. B., Lappalainen, T., MacArthur, D. G., GTEx Consortium & Geuvadis Consortium, 8 May 2015, In : Science. 348, 6235, p. 666-669 4 p.

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Efficient Bayesian approach for multilocus association mapping including gene-gene interactions

Marttinen, P. & Corander, J., 2010, In : BMC Bioinformatics. 11, p. 443 20 p.

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EFFICIENT COMPUTATION WITH A LINEAR MIXED MODEL ON LARGE-SCALE DATA SETS WITH APPLICATIONS TO GENETIC STUDIES

Pirinen, M., Donnelly, P. & Spencer, C. C. A., Mar 2013, In : Annals of Applied Statistics. 7, 1, p. 369-390 22 p.

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Emergence of Epidemic Multidrug-Resistant Enterococcus faecium from Animal and Commensal Strains

Lebreton, F., van Schaik, W., McGuire, A. M., Godfrey, P., Griggs, A., Mazumdar, V., Corander, J., Cheng, L., Saif, S., Young, S., Zeng, Q., Wortman, J., Birren, B., Willems, R. J. L., Earl, A. M. & Gilmore, M. S., 2013, In : mBio. 4, 4, 10 p., ARTN e00534-13.

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