Department of Agricultural Sciences

  • Finland

Publications 1978 2020

2020

Re-designing organic grain legume cropping systems using systems agronomy

Reckling, M., Bergkvist, G., Watson, C. A., Stoddard, F. L. & Bachinger, J., 3 Oct 2020, In : European Journal of Agronomy. 112

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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2019

A comprehensive evaluation of predictive performance of 33 species distribution models at species and community levels

Norberg, A., Abrego Antia, N., Blanchet, F. G., Adler, F. R., Anderson, B. J., Anttila, J., Araújo, M. B., Dallas, T. A., Dunson, D., Elith, J., Foster, S., Fox, R., Franklin, J., Godsoe, W., Guisan, A., O'Hara, B., Hill, N. A., Holt, R. D., Hui, F. K. C., Husby, M. & 15 othersKålås, J. A., Lehikoinen, A., Luoto, M., Mod, H. K., Newell, G., Renner, I., Roslin, T. V., Soininen, J., Thuiller, W., Vanhatalo, J. P., Warton, D., White, M., Zimmermann, N. E., Gravel, D. & Ovaskainen, O. T., Aug 2019, In : Ecological Monographs. 89, 3, 24 p., 01370.

Research output: Contribution to journalArticleScientificpeer-review

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Agroecology

Helenius, J. P., Francis, C. A. & Wezel, A., Feb 2019, Oxford Research Encyclopedias: Environmental Science. Oxford University Press, 20 p.

Research output: Chapter in Book/Report/Conference proceedingEntry for encyclopedia / dictionaryProfessional

Open Access

Agroekologisilla symbiooseilla energiaomavaraiseen ja ravinteet kierrättävään ruokasektoriin?

Translated title of the contribution: Energy self-sufficient and recycling food sector through agroecological symbiosesHelenius, J., Jun 2019, In : Ruralia. 2019, 1, p. 8-9 2 p.

Research output: Contribution to journalArticleProfessional

Open Access
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Allelic Diversity of Acetyl Coenzyme A Carboxylase accD/bccp Genes Implicated in Nuclear-Cytoplasmic Conflict in the Wild and Domesticated Pea (Pisum sp.)

Nováková, E., Zablatzká, L., Brus, J., Nesrstová, V., Hanáček, P., Kalendar, R., Cvrčková, F., Majeský, Ľ. & Smýkal, P., 10 Apr 2019, In : International Journal of Molecular Sciences. 20, 7, 19 p., 1773.

Research output: Contribution to journalArticleScientificpeer-review

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Artificial, In-vitro or Cultured? A Conceptual Analysis of Meat from Cell-Cultures

Räty, N. S., Tuomisto, H. & Ryynänen, T., 9 May 2019. 1 p.

Research output: Conference materialsAbstractResearch

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Assessing changes in arthropod predator-prey interactions through DNA-based gut content analysis-variable environment, stable diet

Eitzinger, B., Abrego, N., Gravel, D., Huotari, T., Vesterinen, E. J. & Roslin, T., Jan 2019, In : Molecular Ecology. 28, 2, p. 266-280 15 p.

Research output: Contribution to journalArticleScientificpeer-review

Association of Shoot and Root Responses to Water Deficit in Young Faba Bean (Vicia faba L.) Plants

Belachew, K. Y., Nagel, K. A., Poorter, H. & Stoddard, F. L., 4 Sep 2019, In : Frontiers in plant science. 10, 10 p., 1063.

Research output: Contribution to journalArticleScientificpeer-review

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Asymmetric pruning reveals how organ connectivity alters the functional balance between leaves and roots of Chinese fir

Dong, T., Duan, B., Korpelainen, H., Niinemets, U. & Li, C., 1 Mar 2019, In : Journal of Experimental Botany. 70, 6, p. 1941-1953 13 p.

Research output: Contribution to journalArticleScientificpeer-review

Biological control of potato soft rot caused by Dickeya solani and the survival of bacterial antagonists under cold storage conditions

Hadizadeh, I., Peivastegan, B., Hannukkala, A., van der Wolf, J. M., Nissinen, R. & Pirhonen, M., Feb 2019, In : Plant Pathology. 68, 2, p. 297-311 15 p.

Research output: Contribution to journalArticleScientificpeer-review

Body and milk traits as indicators of dairy cow energy status in early lactation

Mantysaari, P., Mantysaari, E. A., Kokkonen, T., Mehtio, T., Kajava, S., Grelet, C., Lidauer, P. & Lidauer, M. H., Sep 2019, In : Journal of Dairy Science. 102, 9, p. 7904-7916 13 p.

Research output: Contribution to journalArticleScientificpeer-review

Breed differences of heritable behaviour traits in cats

Salonen, M., Vapalahti, K., Tiira, K., Maki-Tanila, A. & Lohi, H., 28 May 2019, In : Scientific Reports. 9, 10 p., 7949.

Research output: Contribution to journalArticleScientificpeer-review

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Broadleaf trees mediate chemically the growth of Chinese fir through root exudates

Xia, Z., Yu, L., He, Y., Korpelainen, H. & Li, C., Oct 2019, In : Biology and Fertility of Soils. 55, 7, p. 737-749 13 p.

Research output: Contribution to journalArticleScientificpeer-review

Cattle Production for Exports in Water-Abundant Areas: The Case of Finland

Elina, L., Parviainen, T. O., Helenius, J. P., Jalava, M., Salonen, A. O. & Kummu, M., 2 Feb 2019, In : Sustainability. 11, 4, 20 p., 1075.

Research output: Contribution to journalArticleScientificpeer-review

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Chlorophyll fluorescence imaging for monitoring effects of Heterobasidion parviporum small secreted protein induced cell death and in planta defense gene expression.

Wen, Z., Raffaello, T., Zeng, Z., Pavicic Venegas, M. V. & Asiegbu, F. O., 22 May 2019, In : Fungal Genetics and Biology. 126, p. 37-49 13 p.

Research output: Contribution to journalArticleScientificpeer-review

Coincidence of High Nature Value farmlands with bird and butterfly diversity

Mäkeläinen, S., Harlio, A., Heikkinen, R. K., Herzon, I., Kuussaari, M., Lepikkö, K., Maier, A., Seimola, T., Tiainen, J. & Arponen, A., 1 Jan 2019, In : Agriculture, Ecosystems & Environment. 269, 1, p. 224-233 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Comparing RADseq and microsatellites for estimating genetic diversity and relatedness - Implications for brown trout conservation

Lemopoulos, A., Prokkola, J. M., Uusi-Heikkilä, S., Vasemägi, A., Huusko, A., Hyvarinen, P., Koljonen, M-L., Koskiniemi, J. & Vainikka, A., Feb 2019, In : Ecology and Evolution. 9, 4, p. 2106-2120 15 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Computationally efficient model for energy demand prediction of electric city bus in varying operating conditions

Vepsäläinen, J., Otto, K., Lajunen, A. & Tammi, K., 15 Feb 2019, In : Energy. 169, p. 433-443 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Congruent patterns of functional diversity in saproxylic beetles and fungi across European beech forests

Hagge, J., Abrego, N., Baessler, C., Bouget, C., Brin, A., Brustel, H., Christensen, M., Gossner, M. M., Heilmann-Clausen, J., Horak, A., Gruppe, A., Isacsson, G., Koehler, F., Lachat, T., Larrieu, L., Schlaghamersky, J., Thorn, S., Zapponi, L. & Mueller, J., May 2019, In : Journal of Biogeography. 46, 5, p. 1054-1065 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Counting with DNA in metabarcoding studies: How should we convert sequence reads to dietary data?

Deagle, B. E., Thomas, A. C., McInnes, J. C., Clarke, L. J., Vesterinen, E. J., Clare, E. L., Kartzinel, T. R. & Eveson, J. P., Jan 2019, In : Molecular Ecology. 28, 2, p. 391-406 16 p.

Research output: Contribution to journalArticleScientificpeer-review

Cultured Meat in the Social Science Research: A Tentative Classification of the Challenges

Ryynänen, T., Räty, N. S. & Tuomisto, H., Oct 2019, p. 38. 1 p.

Research output: Conference materialsAbstractResearch

Open Access
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Distinct co-occurrence patterns and driving forces of rare and abundant bacterial subcommunities following a glacial retreat in the eastern Tibetan Plateau

Jiang, Y., Song, H., Lei, Y., Korpelainen, H. & Li, C., May 2019, In : Biology and Fertility of Soils. 55, 4, p. 351-364 14 p.

Research output: Contribution to journalArticleScientificpeer-review

Early growth of Scots pine seedlings is affected by seed origin and light quality

Alakärppä, E., Taulavuori, E., Valledor, L., Marttila, T., Jokipii-Lukkari, S., Karppinen, K., Nguyen, N., Taulavuori, K. & Häggman, H., Jun 2019, In : Journal of Plant Physiology. 237, p. 120-128 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Earthworm Lumbricus terrestris mediated redistribution of C and N into large macroaggregate-occluded soil fractions in fine-textured no-till soils

Sheehy, J., Nuutinen, V., Six, J., Palojarvi, A., Knuutila, O., Kaseva, J. & Regina, K., Aug 2019, In : Applied Soil Ecology. 140, p. 26-34 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Ecological intensification by integrating biogas production into nutrient cycling: Modeling the case of Agroecological Symbiosis

Koppelmäki, K. V., Parviainen, T. O., Virkkunen, E., Winquist, E., Schulte, R. & Helenius, J. P., 1 Mar 2019, In : Agricultural Systems. 170, p. 39-48 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Effect of wet storage conditions on potato tuber transcriptome, phytohormones and growth

Peivastegan, B., Hadizadeh, I., Nykyri, J., Nielsen, K. L., Somervuo, P., Sipari, N., Tran, C. & Pirhonen, M., 17 Jun 2019, In : BMC Plant Biology. 19, 18 p., 262.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Effects of competition and phosphorus fertilization on leaf and root traits of late-successional conifers Abies fabri and Picea brachytyla

Yu, L., Song, M., Lei, Y., Korpelainen, H., Niinemets, U. & Li, C., Jun 2019, In : Environmental and Experimental Botany. 162, p. 14-24 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Eliminating vicine and convicine, the main anti-nutritional factors restricting faba bean usage

Khazaei, H., Purves, R. W., Hughes, J., Link, W., O'Sullivan, D. M., Schulman, A. H., Björnsdotter, E., Geu-Flores, F., Nadzieja, M., Andersen, S. U., Stougaard, J., Vandenberg, A. & Stoddard, F. L., 2 Aug 2019, In : Trends in Food Science & Technology. 91, p. 549-556 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Elintarvikesektori maakunnan kestävän biotalouden veturiksi

Translated title of the contribution: Food sector as an engine for sustainable bioeconomy of the regionHelenius, J., Ryynänen, T. & Hyyryläinen, T., 16 Sep 2019, 1 p. Kouvola : Kaakon Viestintä Oy.

Research output: Other contributionResearch

Erosion-transported OC and DOC loads from agricultural soil

Manninen, N., Kanerva, S., Lemola, R., Turtola, E. & Soinne, H., 2019, p. 40. 1 p.

Research output: Conference materialsAbstractResearch

Establishing arthropod community composition using metabarcoding: Surprising inconsistencies between soil samples and preservative ethanol and homogenate from Malaise trap catches

Marquina, D., Esparza-Salas, R., Roslin, T. & Ronquist, F., 2019, In : Molecular Ecology Resources. 15 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access

European Court of Justice delivers no justice to Europe on genome-edited crops

Schulman, A. H., Oksman-Caldentey, K-M. & Teeri, T. H., Jul 2019, In : Plant biotechnology journal. 3 p.

Research output: Contribution to journalLetterScientificpeer-review

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Exploring cultural acceptability of a hypothetical results-based agri-environment payment for grassland biodiversity

Birge, T. L. & Herzon, I., Apr 2019, In : Journal of Rural Studies. 67, p. 1-11 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Finding flies in the mushroom soup: Host specificity of fungus-associated communities revisited with a novel molecular method

Koskinen, J., Roslin, T., Nyman, T., Abrego, N., Michell, C. & Vesterinen, E. J., Jan 2019, In : Molecular Ecology. 28, 2, p. 190-202 13 p.

Research output: Contribution to journalArticleScientificpeer-review

Flower-visitor communities of an arcto-alpine plant-Global patterns in species richness, phylogenetic diversity and ecological functioning

Tiusanen, M., Huotari, T., Hebert, P. D. N., Andersson, T., Asmus, A., Bety, J., Davis, E., Gale, J., Hardwick, B., Hik, D., Körner, C., Lanctot, R. B., Loonen, M. J. J. E., Partanen, R., Reischke, K., Saalfeld, S. T., Senez-Gagnon, F., Smith, P. A., Sulavik, J., Syvanpera, I. & 5 othersUrbanowicz, C., Williams, S., Woodard, P., Zaika, Y. & Roslin, T., Jan 2019, In : Molecular Ecology. 28, 2, p. 318-335 18 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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From feces to data: A metabarcoding method for analyzing consumed and available prey in a bird-insect food web

Rytkönen, S., Vesterinen, E. J., Westerduin, C., Leviäkangas, T., Vatka, E., Mutanen, M., Välimäki, P., Hukkanen, M., Suokas, M. & Orell, M., Jan 2019, In : Ecology and Evolution. 9, 1, p. 631-639 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Genetic analysis of the grapevine genotypes of the Russian Vitis ampelographic collection using iPBS markers

Milovanov, A., Zvyagin, A., Daniyarov, A., Kalendar, R. & Troshin, L., Feb 2019, In : Genetica. 147, 1, p. 91-101 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Genetic parameters for cow-specific digestibility predicted by near infrared reflectance spectroscopy

Mehtiö, T., Mäntysaari, P., Kokkonen, T., Kajava, S., Prestløkken, E., Kidane, A., Wallén, S., Nyholm, L., Negussie, E., Mäntysaari, E. A. & Lidauer, M. H., Aug 2019, In : Livestock Science. 226, p. 1-6 6 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Genetic parameters for endocrine and traditional fertility traits, hyperketonemia and milk yield in dairy cattle

Haggman, J., Christensen, J. M., Mantysaari, E. A. & Juga, J., Feb 2019, In : Animal. 13, 2, p. 248-255 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Genome-wide association studies targeting the yield of extraembryonic fluid and production traits in Russian White chickens

Kudinov, A. A., Dementieva, N. V., Mitrofanova, O. V., Stanishevskaya, O. I., Fedorova, E. S., Larkina, T. A., Mishina, A. I., Plemyashov, K. V., Griffin, D. K. & Romanov, M. N., 4 Apr 2019, In : BMC Genomics. 20, 1, 12 p., 270.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Genotypic variation in leaf epicuticular wax quantity in a large faba bean (Vicia faba L.) germplasm collection

Khazaei, H., Santanen, A., Street, K. & Stoddard, F. L., Jun 2019, In : Plant Genetic Resources. 17, 3, p. 298-300 3 p., 1479262118000461.

Research output: Contribution to journalArticleScientificpeer-review

Havaintoja vivianiittia sisältävästä maaprofiilista Vaalassa

Translated title of the contribution: Observations of a soil profile containing vivianiteYli-Halla, M. J. & Suomela, R., 25 Mar 2019, In : ePooki : Oulun seudun ammattikorkeakoulun tutkimus- ja kehitystyön julkaisut. 2019, 14, 8 p.

Research output: Contribution to journalArticleProfessional

Open Access
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High tick abundance and diversity of tick-borne pathogens in a Finnish city

Klemola, T., Mojzer, J., Sormunen, J. J., Mäkelä, S. & Vesterinen, E. J., Oct 2019, In : Urban Ecosystems. 22, 5, p. 817–826 10 p.

Research output: Contribution to journalArticleScientificpeer-review

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HowULearn and Oodikone as tools for enhancing learning and progress in academic studies

Kymäläinen, H-R., Luukkainen, M. & Södervik, I., 2019, EDULEARN19 Proceedings. Gómez Chova, L., López Martínez, A. & Candel Torres, I. (eds.). IATED Academy, p. 1033-1037 5 p. (EDULEARN Proceedings ).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

Open Access
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Impact of hexamine addition to a nitrite-based additive on fermentation quality, Clostridia and Saccharomyces cerevisiae in a white lupin-wheat silage

König, W., Konig, E., Weiss, K., Tuomivirta, T. T., Fritze, H., Elo, K., Vanhatalo, A. & Jaakkola, S., 15 Mar 2019, In : Journal of the Science of Food and Agriculture. 99, 4, p. 1492-1500 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Impacts of urbanization on insect herbivory and plant defences in oak trees

Moreira, X., Abdala-Roberts, L., Mier y Teran, J. C. B., Covelo, F., de la Mata, R., Francisco, M., Hardwick, B., Pires, R. M., Roslin, T., Schigel, D. S., ten Hoopen, J. P. J. G., Timmermans, B. G. H., van Dijk, L. J. A., Castagneyrol, B. & Tack, A. J. M., Jan 2019, In : Oikos. 128, 1, p. 113-123 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Improving Group Work Practices in Teaching Life Sciences: Trialogical Learning

Tammeorg, P., Mykkänen, A., Rantamäki, T., Lakkala, M. & Muukkonen, H., Jun 2019, In : Research in Science Education. 49, 3, p. 809-828 20 p.

Research output: Contribution to journalArticleScientificpeer-review

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