Department of Bacteriology and Immunology

  • Finland

Publications 1979 2019

2019

A Bifidobacterial pilus-associated protein promotes colonic epithelial proliferation

Motherway, M. OC., Houston, A., O'Callaghan, G., Reunanen, J., O'Brien, F., O'Driscoll, T., Casey, P. G., de Vos, W. M., van Sinderen, D. & Shanahan, F., Jan 2019, In : Molecular Microbiology. 111, 1, p. 287-301 15 p.

Research output: Contribution to journalArticleScientificpeer-review

Akkermansia muciniphila ameliorates the age-related decline in colonic mucus thickness and attenuates immune activation in accelerated aging Ercc1(-/7) mice

van der Lugt, B., van Beek, A. A., Aalvink, S., Meijer, B., Sovran, B., Vermeij, W. P., Brandt, R. M. C., de Vos, W. M., Savelkoul, H. F. J., Steegenga, W. T. & Belzer, C., 8 Mar 2019, In : Immunity & Ageing. 16, 17 p., 6.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Author's response: False-positive results with rapid diagnostic test for dengue in Thailand

Kantele, A., 23 May 2019, In : Eurosurveillance. 24, 21, p. 45-46 2 p., 1900309.

Research output: Contribution to journalLetterScientific

Open Access
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Bacterial biofilm in salivary stones

Perez-Tanoira, R., Aarnisalo, A., Haapaniemi, A., Saarinen, R., Kuusela, P. & Kinnari, T. J., Jun 2019, In : European Archives of Oto-Rhino-Laryngology. 276, 6, p. 1815-1822 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Bowel Biofilms: Tipping Points between a Healthy and Compromised Gut?

Tytgat, H. L. P., Nobrega, F. L., van der Oost, J. & de Vos, W. M., Jan 2019, In : Trends in Microbiology. 27, 1, p. 17-25 9 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Characterization of vB_ApiM_fHyAci03, a novel lytic bacteriophage that infects clinical Acinetobacter strains

Pulkkinen, E., Wicklund, A., Oduor, J. M. O., Skurnik, M. & Kiljunen, S., Aug 2019, In : Archives of Virology. 164, 8, p. 2197-2199 3 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Dampness and mold hypersensitivity syndrome and vaccination as risk factors for chronic fatigue syndrome

Tuuminen, T., Jääskeläinen, T., Vaali, K. & Polo, O., Jan 2019, In : Autoimmunity reviews. 18, 1, p. 107-108 2 p.

Research output: Contribution to journalLetterScientific

Deciphering the Antibacterial Mode of Action of Alpha-Mangostin on Staphylococcus epidermidis RP62A Through an Integrated Transcriptomic and Proteomic Approach

Sivaranjani, M., Leskinen, K., Aravindraja, C., Saavalainen, P., Pandian, S. K., Skurnik, M. & Ravi, A. V., 6 Feb 2019, In : Frontiers in Microbiology. 10, 16 p., 150.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Differences and overlap in plasma protein expression during colorectal cancer progression

Holm, M., Joenväärä, S., Saraswat, M., Tohmola, T., Ristimäki, A., Renkonen, R. & Haglund, C., 5 Aug 2019, In : Translational Medicine Communications. 4, 1

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Genomic characterization of four novel Staphylococcus myoviruses

Oduor, J. M. O., Kiljunen, S., Kadija, E., Mureithi, M. W., Nyachieo, A. & Skurnik, M., 2019, In : Archives of Virology.

Research output: Contribution to journalArticleScientificpeer-review

Influenza A Virus Infection Induces Hyperresponsiveness in Human Lung Tissue-Resident and Peripheral Blood NK Cells

Scharenberg, M., Vangeti, S., Kekäläinen, E., Bergman, P., Al-Ameri, M., Johansson, N., Sonden, K., Falck-Jones, S., Färnert, A., Ljunggren, H-G., Michaelsson, J., Smed-Sörensen, A. & Marquardt, N., 17 May 2019, In : Frontiers in Immunology. 10, 10 p., 1116.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Kansallinen sisäilma ja terveys -ohjelma 2018 - 2028 tukee terveydenhuoltoa

Haahtela, T. & Renkonen, R., 2019, In : Duodecim. 135, 8, p. 704-706 3 p.

Research output: Contribution to journalEditorialProfessional

Lääketieteellinen farmakologia ja toksikologia

Ruskoaho, H. (ed.), Hakkola, J. (ed.), Huupponen, R. (ed.), Kantele, A. (ed.), Korpi, E. (ed.), Moilanen, E. (ed.), Piepponen, P. (ed.), Savontaus, E., Tenhunen, O. (ed.), Vähäkangas, K. & Anttila, V-J., 2019, 5. uud. p. ed. Helsinki: Duodecim. 1288 p.

Research output: Book/ReportBookProfessional

Label-Free Proteomics Approach Characterizes Plasma Protein Signature of Donor Brain Death

Lukac, J., Saraswata, M., Joenvääräa, S., Holmström, E., Dhaygude, K., Krebs, R., Nykänen, A., Renkonen, R. & Lemström, K., Apr 2019, In : Journal of Heart and Lung Transplantation. 38, 4, Supplement, p. S159

Research output: Contribution to journalConference articleScientificpeer-review

Long-term impact of oral vancomycin, ciprofloxacin and metronidazole on the gut microbiota in healthy humans

Haak, B. W., Lankelma, J. M., Hugenholtz, F., Belzer, C., de Vos, W. M. & Wiersinga, W. J., Mar 2019, In : Journal of Antimicrobial Chemotherapy. 74, 3, p. 782-786 5 p.

Research output: Contribution to journalArticleScientificpeer-review

Low Temperature and Low UV Indexes Correlated with Peaks of Influenza Virus Activity in Northern Europe during 2010-2018

Ianevski, A., Zusinaite, E., Shtaida, N., Kallio-Kokko, H., Valkonen, M., Kantele, A., Telling, K., Lutsar, I., Letjuka, P., Metelitsa, N., Oksenych, V., Dumpis, U., Vitkauskiene, A., Stasaitis, K., Öhrmalm, C., Bondeson, K., Bergqvist, A., Cox, R. J., Tenson, T., Merits, A. & 1 othersKainov, D. E., 1 Mar 2019, In : Viruses. 11, 3, 10 p., 207.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Polymyxin Derivatives that Sensitize Gram-Negative Bacteria to Other Antibiotics

Vaara, M., 2 Jan 2019, In : Molecules. 24, 2, 15 p., 249.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Pulmonary effects of nanofibrillated celluloses in mice suggest that carboxylation lowers the inflammatory and acute phase responses

Hadrup, N., Knudsen, K. B., Berthing, T., Wolff, H., Bengtson, S., Kofoed, C., Espersen, R., Hojgaard, C., Winther, J. R., Willemoes, M., Wedin, I., Nuopponen, M., Alenius, H., Norppa, H., Wallin, H. & Vogel, U., Feb 2019, In : Environmental Toxicology and Pharmacology. 66, p. 116-125 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Regulation of the Complement System by Pentraxins

Haapasalo, K. & Meri, S., 2 Aug 2019, In : Frontiers in Immunology. 10

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Open Access

Role of Pneumococcal NanA Neuraminidase Activity in Peripheral Blood

Syed, S., Hakala, P., Singh, A. K., Lapatto, H. A. K., King, S. J., Meri, S., Jokiranta, T. S. & Haapasalo, K., 26 Jun 2019, In : Frontiers in Cellular and Infection Microbiology. 9, 11 p., 218.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Seasonal influenza vaccines induced high levels of neutralizing cross-reactive antibody responses against different genetic group influenza A(H1N1)pdm09 viruses

Haveri, A., Ikonen, N., Kantele, A., Anttila, V-J., Ruotsalainen, E., Savolainen-Kopra, C. & Julkunen, I., 6 May 2019, In : Vaccine. 37, 20, p. 2731-2740 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Selective BMP-9 Inhibition Partially Protects Against Experimental Pulmonary Hypertension

Tu, L., Desroches-Castan, A., Mallet, C., Guyon, L., Cumont, A., Phan, C., Robert, F., Thuillet, R., Bordenave, J., Sekine, A., Huertas, A., Ritvos, O., Savale, L., Feige, J-J., Humbert, M., Bailly, S. & Guignabert, C., 15 Mar 2019, In : Circulation Research. 124, 6, p. 846-855 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Sisäsynnytintulehdus

Rantsi, T., Tuominen, M., Virtanen, S., Molander, P. & Paavonen, J., 2019, In : Duodecim. 135, 8, p. 719-726 8 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Soil exposure modifies the gut microbiota and supports immune tolerance in a mouse model

Ottman, N., Ruokolainen, L., Suomalainen, A., Sinkko, H., Karisola, P., Lehtimaki, J., Lehto, M., Hanski, I., Alenius, H. & Fyhrquist, N., Mar 2019, In : Journal of Allergy and Clinical Immunology. 143, 3, p. 1198-1206.e12 21 p.

Research output: Contribution to journalArticleScientificpeer-review

Stand-by antibiotics encourage unwarranted use of antibiotics for travelers' diarrhea: A prospective study

Vilkman, K., Lääveri, T., Pakkanen, S. H. & Kantele, A., 2019, In : Travel medicine and infectious disease. 27, p. 64-71 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Staphylococcus aureus toxin LukSF dissociates from its membrane receptor target to enable renewed ligand sequestration

Haapasalo, K., Wollman, A. J. M., de Haas, C. J. C., van Kessel, K. P. M., van Strijp, J. A. G. & Leake, M. C., Mar 2019, In : FASEB Journal. 33, 3, p. 3807-3824 18 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Systemic Blockade of ACVR2B Ligands Protects Myocardium from Acute Ischemia-Reperfusion Injury

Magga, J., Vainio, L., Kilpio, T., Hulmi, J. J., Taponen, S., Lin, R., Räsänen, M., Szabo, Z., Gao, E., Rahtu-Korpela, L., Alakoski, T., Ulvila, J., Laitinen, M., Pasternack, A., Koch, W. J., Alitalo, K., Kivela, R., Ritvos, O. & Kerkelä, R., 6 Mar 2019, In : Molecular therapy. 27, 3, p. 600-610 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Tape-stripping alters the microbe-host correlations in mouse skin

Karisola, P., Suomalainen, A., Fortino, V., Ottman, N., Vendelin, J., Wolff, H. J., Ruokolainen, L., Greco, D., Fyhrquist, N. & Alenius, H., Mar 2019, In : Allergy : European journal of allergy and clinical immunology. 74, 3, p. 617-621 5 p.

Research output: Contribution to journalLetterScientific

Taxonomy of the order Bunyavirales: second update 2018

Maes, P., Adkins, S., Alkhovsky, S. V., Avsic-Zupanc, T., Ballinger, M. J., Bente, D. A., Beer, M., Bergeron, E., Blair, C. D., Briese, T., Buchmeier, M. J., Burt, F. J., Calisher, C. H., Charrel, R. N., Choi, I. R., Clegg, J. C. S., de la Torre, J. C., de Lamballerie, X., DeRisi, J. L., Digiaro, M. & 58 othersDrebot, M., Ebihara, H., Elbeaino, T., Ergunay, K., Fulhorst, C. F., Garrison, A. R., Gao, G. F., Gonzalez, J-P. J., Groschup, M. H., Guenther, S., Haenni, A-L., Hall, R. A., Hewson, R., Hughes, H. R., Jain, R. K., Jonson, M. G., Junglen, S., Klempa, B., Klingstrom, J., Kormelink, R., Lambert, A. J., Langevin, S. A., Lukashevich, I. S., Marklewitz, M., Martelli, G. P., Mielke-Ehret, N., Mirazimi, A., Muehlbach, H-P., Naidu, R., Teixeira Nunes, M. R., Palacios, G., Papa, A., Paweska, J. T., Peters, C. J., Plyusnin, A., Radoshitzky, S. R., Resende, R. O., Romanowski, V., Sall, A. A., Salvato, M. S., Sasaya, T., Schmaljohn, C., Shi, X., Shirako, Y., Simmonds, P., Sironi, M., Song, J-W., Spengler, J. R., Stenglein, M. D., Tesh, R. B., Turina, M., Wei, T., Whitfield, A. E., Yeh, S-D., Murilo Zerbini, F., Zhang, Y-Z., Zhou, X. & Kuhn, J. H., Mar 2019, In : Archives of Virology. 164, 3, p. 927-941 15 p.

Research output: Contribution to journalComment/debateScientificpeer-review

Open Access
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The Removal of Endo- and Enterotoxins From Bacteriophage Preparations

Hietala, V., Horsma-Heikkinen, J., Carron, A., Skurnik, M. & Kiljunen, S., 23 Jul 2019, In : Frontiers in Microbiology. 10

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Tumour-cell-derived complement components C1r and C1s promote growth of cutaneous squamous cell carcinoma

Riihilä, P., Viiklepp, K., Nissinen, L., Farshchian, M., Kallajoki, M., Kivisaari, A., Meri, S., Peltonen, J., Peltonen, S. & Kähäri, V-M., 3 May 2019, In : British Journal of Dermatology. 13 p.

Research output: Contribution to journalArticleScientificpeer-review

Tutkijalääkäriohjelma tarjoaa nopean alun tutkijanuralle

Vihma, K., Uusikangas, S., Bergman, P. H., Renkonen, R., Sariola, H., Lehtisalo, M., Niemi, M., Rice, D. P., Heikinheimo, M., Rahkonen, O. & Mäkitie, A., Feb 2019, In : Duodecim. 135, 3, p. 275-282 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access

Ultraviolet B radiation modifies circadian time in epidermal skin and in subcutaneous adipose tissue

Nikkola, V., Miettinen, M. E., Karisola, P., Grönroos, M., Ylianttila, L., Alenius, H., Snellman, E. & Partonen, T., May 2019, In : Photodermatology, Photoimmunology & Photomedicine. 35, 3, p. 157-163 7 p.

Research output: Contribution to journalArticleScientificpeer-review

Yersinia pestis Interacts With SIGNR1 (CD209b) for Promoting Host Dissemination and Infection

Yang, K., He, Y., Park, C. G., Kang, Y. S., Zhang, P., Han, Y., Cui, Y., Bulgheresi, S., Anisimov, A. P., Dentovskaya, S., Ying, X., Jiang, L., Ding, H., Njiri, O. A., Zhang, S., Zheng, G., Xia, L., Kan, B., Wang, X., Jing, H. & 12 othersYang, M., Li, W., Wang, Y., Xiamu, X., Chen, G., Ma, D., Bartra, S. S., Plano, G., Klena, J. D., Yang, R., Skurnik, M. & Chen, T., 12 Mar 2019, In : Frontiers in Immunology. 10, 15 p., 96.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Yersinia pseudotuberculosis Exploits CD209 Receptors for Promoting Host Dissemination and Infection

He, Y-X., Ye, C-L., Zhang, P., Li, Q., Park, C. G., Yang, K., Jiang, L-Y., Lv, Y., Ying, X-L., Ding, H-H., Huang, H-P., Tembo, J. M., Li, A-Y., Cheng, B., Zhang, S-S., Zheng, G-X., Chen, S-Y., Li, W., Xia, L-X., Kan, B. & 8 othersWang, X., Jing, H-Q., Yang, R-F., Peng, H., Fu, Y-X., Klena, J. D., Skurnik, M. & Chen, T., Jan 2019, In : Infection and Immunity. 87, 1, 16 p., ARTN e00654-18.

Research output: Contribution to journalArticleScientificpeer-review

2018

A Co-culture Model of PBMC and Stem Cell Derived Human Nasal Epithelium Reveals Rapid Activation of NK and Innate T Cells Upon Influenza A Virus Infection of the Nasal Epithelium

Luukkainen, A., Puan, K. J., Yusof, N., Lee, B., Tan, K. S., Liu, J., Yan, Y., Toppila-Salmi, S., Renkonen, R., Chow, V. T., Rotzschke, O. & Wang, D. Y., 8 Nov 2018, In : Frontiers in Immunology. 9, 10 p., 2514.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Activity of rheumatoid arthritis correlates with oral inflammatory burden

Äyräväinen, L., Heikkinen, A. M., Kuuliala, A., Ahola, K., Koivuniemi, R., Peltola, J., Suomalainen, A., Moilanen, E., Hämäläinen, M., Laasonen, L., Meurman, J. H. & Leirisalo-Repo, M., Sep 2018, In : Rheumatology International. 38, 9, p. 1661-1669 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access

Advanced tools for the safety assessment of nanomaterials

Fadeel, B., Farcal, L., Hardy, B., Vazquez-Campos, S., Hristozov, D., Marcomini, A., Lynch, I., Valsami-Jones, E., Alenius, H. & Savolainen, K., Jul 2018, In : Nature Nanotechnology. 13, 7, p. 537-543 7 p.

Research output: Contribution to journalArticleScientificpeer-review

Akkermansia muciniphila induces gut microbiota remodelling and controls islet autoimmunity in NOD mice

Hänninen, A., Toivonen, R., Pöysti, S., Belzer, C., Plovier, H., Ouwerkerk, J. P., Emani, R., Cani, P. D. & De Vos, W. M., Aug 2018, In : Gut. 67, 8, p. 1445-1453 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Akkermansia muciniphila in the Human Gastrointestinal Tract: When, Where, and How?

Geerlings, S. Y., Kostopoulos, I., de Vos, W. M. & Belzer, C., 23 Jul 2018, In : Microorganisms. 6, 3, 26 p., 75.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Albin Koponen ja alvejuuri - Suomen lääketeollisuus sai alkunsa matolääkkeestä

Lavikainen, A., 2018, In : Duodecim. 134, 13-14, p. 1328-1333 6 p.

Research output: Contribution to journalArticleProfessional

Anti-rheumatic medication and salivary MMP-8, a biomarker for periodontal disease

Äyräväinen, L., Heikkinen, A. M., Kuuliala, A., Ahola, K., Koivuniemi, R., Moilanen, E., Hämäläinen, M., Tervahartiala, T., Meurman, J. H., Leirisalo-Repo, M. & Sorsa, T., Nov 2018, In : Oral Diseases. 24, 8, p. 1562-1571 10 p.

Research output: Contribution to journalArticleScientificpeer-review