Department of Biochemistry and Developmental Biology

  • Finland

Publications

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Review Article
Review Article

Amyotrofisen lateraaliskleroosin ja otsalohkodementian patogeneesi avautuu : tumapatologia ja glutamaattiherkkyys

Tienari, P., Kiviharju, A., Valori, M., Lindholm, D. & Laaksovirta, H., 2016, In : Duodecim. 132, 5, p. 423-431 9 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

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c-Abl Inhibitors Enable Insights into the Pathophysiology and Neuroprotection in Parkinson's Disease

Lindholm, D., Pham, D. D., Cascone, A., Eriksson, O., Wennerberg, K. & Saarma, M., 26 Oct 2016, In : Frontiers in aging neuroscience. 8, 6 p., 254.

Research output: Contribution to journalReview ArticleScientificpeer-review

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Cell biology and function of neuronal ceroid lipofuscinosis-related proteins

Kollmann, K., Uusi-Rauva, K., Scifo, E., Tyynelä, J., Jalanko, A. & Braulke, T., 1 Nov 2013, In : Biochimica et Biophysica Acta. Molecular Basis of Disease. 1832, 11, p. 1866-1881 16 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Cell signaling pathways engaged by KSHV: [review]

Järviluoma, A. & Ojala, P., 2006, In : Biochimica et Biophysica Acta. Reviews on Cancer. 1766, p. 140-158 19 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Chromophore chemistry of fluorescent proteins controlled by light

Shcherbakova, D. M. & Verkhusha, V. V., Jun 2014, In : Current Opinion in Chemical Biology. 20, p. 60-68 9 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Current disease modifying approaches to treat Parkinson's disease

Lindholm, D., Mäkelä, J., Di Liberto, V., Mudo, G., Belluardo, N., Eriksson-Rosenberg, O. & Saarma, M., Apr 2016, In : Cellular and Molecular Life Sciences. 73, 7, p. 1365-1379 15 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Faulty Epithelial Polarity Genes and Cancer

Tervonen, T. A., Partanen, J. I., Saarikoski, S. T., Myllynen, M., Marques, E., Paasonen, K., Moilanen, A., Wohlfahrt, G., Kovanen, P. E. & Klefström, J., 2011, In : Advances in Cancer Research. 111, p. 97-161 65 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Gangliosides of brain and of extraneural tissues: structural relationship to protein-linked glycans

Rauvala, H. & Finne, J., 1980, In : Advances in Experimental Medicine and Biology. 125, p. 185-198 14 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Identification and Design of Antimicrobial Peptides for Therapeutic Applications

Ahmad, A., Ahmad, E., Rabbani, G., Haque, S., Arshad, M. & Khan, R. H., 2012, In : Current protein and peptide science. 13, 3, p. 211-223 13 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Immunity to lantibiotics

Saris, P. E. J., Immonen, T., Reis, M. & Sahl, H. S., 1996, In : Antonie van Leeuwenhoek. 69, 2, p. 151-159 9 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

INTERSPECIES CHIMERAS - AN EXPERIMENTAL APPROACH FOR STUDIES ON EMBRYONIC ANGIOGENESIS

SARIOLA, H., 1985, In : Medical Biology. 63, p. 43-65 23 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Is Spontaneous Translocation of Polar Lipids Between Cellular Organelles Negligible?

Somerharju, P. J., 2016, In : Lipid Insight. 2016, suppl. 1, p. 87-93 7 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Märkäisistä haavasiteistä yksilön genomiin

Immonen, T. & Sariola, H., 2003, In : Duodecim. 119, 24, p. 2453-2459 7 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Mechanisms of glycerophospholipid homeostasis in mammalian cells

Hermansson, M., Hokynar, K. & Somerharju, P., 2011, In : Progress in Lipid Research. 50, 3, p. 240-257 17 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Meiotic spindle assembly checkpoint and aneuploidy in males versus females

Lane, S. & Kauppi, L., Mar 2019, In : Cellular and Molecular Life Sciences. 76, 6, p. 1135-1150 16 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Mikro-RNA:t - uusi tapa säädellä proteiinien tuottoa: Roska-DNA:lle töitä?

Immonen, T. & Sariola, H., 2002, In : Duodecim. 118, 7, p. 661-662 2 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Molecular profiling of laryngeal cancer

Mäkitie, A. & Monni, O., 2009, In : Expert Review of Anticancer Therapy. 9, 9, p. 1251-1260 10 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

More than nervous: The emerging roles of plexins

Perälä, N., Sariola, H. & Immonen, T., 2012, In : Differentiation. 83, 1, p. 77-91 15 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Mutual relationships between transcription and pre-mRNA processing in the synthesis of mRNA

Lenasi, T. & Barboric, M., 2013, In : Wiley Interdisciplinary Reviews. RNA. 4, 2, p. 139-154 16 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Natural Photoreceptors as a Source of Fluorescent Proteins, Biosensors, and Optogenetic Tools

Shcherbakova, D. M., Shemetov, A. A., Kaberniuk, A. A. & Verkhusha, V. V., 2015, In : Annual Review of Biochemistry. 84, p. 519-550 32 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

NCL disease mechanisms

Palmer, D. N., Barry, L. A., Tyynelä, J. & Cooper, J. D., 1 Nov 2013, In : Biochimica et Biophysica Acta. Molecular Basis of Disease. 1832, 11, p. 1882-1893 12 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Near-Infrared Fluorescent Proteins: Multiplexing and Optogenetics across Scales

Shcherbakova, D. M., Stepanenko, O. V., Turoverov, K. K. & Verkhusha, V. V., Dec 2018, In : Trends in Biotechnology. 36, 12, p. 1230-1243 14 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Near-Infrared Fluorescent Proteins, Biosensors, and Optogenetic Tools Engineered from Phytochromes

Chernov, K. G., Redchuk, T., Omelina, E. & Verkhusha, V., 10 May 2017, In : Chemical Reviews. 117, 9, p. 6423-6446 24 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Near-infrared fluorescent proteins engineered from bacterial phytochromes

Shcherbakova, D. M., Baloban, M. & Verkhusha, V. V., Aug 2015, In : Current Opinion in Chemical Biology. 27, p. 52-63 12 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

NEUROTROPHIN RECEPTORS IN KIDNEY DEVELOPMENT

SAARMA, M., SAINIO, K., MOSHNYAKOV, M., SAXEN, L. & SARIOLA, H., 1993, In : Journal of Neurochemistry. 61, p. S179-S179 1 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

NEUROTROPHINS AND CILIARY NEUROTROPHIC FACTOR - THEIR BIOLOGY AND PATHOLOGY

SARIOLA, H., SAINIO, K., ARUMAE, U. & SAARMA, M., 1994, In : Annals of Internal Medicine. 26, p. 355-363 9 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Optogenetically controlled protein kinases for regulation of cellular signaling

Leopold, A. V., Chernov, K. G. & Verkhusha, V. V., 7 Apr 2018, In : Chemical Society Reviews. 47, 7, p. 2454-2484 31 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

p53 reactivation kills KSHV lymphomas efficiently in vitro and in vivo: new hope for treating aggressive viral lymphomas

Sarek, G. & Ojala, P., 2007, In : Cell Cycle. 6, 18, p. 2205-2209 5 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Par6 family proteins in cancer

De Oliveira Marques, E. & Klefström, J. T., 2015, In : Oncoscience. 2, 11, p. 894-895 2 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Persistence of human parvovirus B19 in human tissues

Söderlund-Venermo, M., Hokynar, K. C., Nieminen, J., Rautakorpi, H. & Hedman, K., 2002, In : Pathologie et Biologie. 50, p. 307-316 19 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Protein misfolding in neurodegenerative diseases: implications and strategies

Sweeney, P., Park, H., Baumann, M., Dunlop, J., Frydman, J., Kopito, R., McCampbell, A., Leblanc, G., Venkateswaran, A., Nurmi, A. & Hodgson, R., 13 Mar 2017, In : Translational neurodegeneration. 6, 13 p., 6.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Proteomics: posttranslational modifications, immune responses and current analytical tools

Meri, S. & Baumann, M., 2001, In : Biomolecular engineering. 18, p. 213-220 8 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Recent advances in applying mass spectrometry and systems biology to determine brain dynamics

Scifo, E., Calza, G., Fuhrmann, M., Soliymani, R., Baumann, M. & Lalowski, M., 1 Jun 2017, In : Expert review of proteomics.. 14, 6, p. 545-559 15 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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RET tyrosine kinase signaling in development and cancer

Arighi, E., Borrello, M. G. & Sariola, H., 2005, In : Cytokine. 16, p. 441-467 27 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Synthesis and Biosynthetic Trafficking of Membrane Lipids

Blom, J. T., Somerharju, P. & Ikonen, E. M., 2011, In : Cold Spring Harbor Perspectives in Biology. 3, 8, p. 9057-9067

Research output: Contribution to journalReview ArticleScientificpeer-review

Systeemibiologia syöpätutkimuksessa: [katsaus]

Hautaniemi, S., Vallenius, T. & Mäkelä, T., 2006, In : Duodecim. 122, p. 2484-2490 7 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

The E3 ubiquitin ligase inducible degrader of the LDL receptor/myosin light chain interacting protein in health and disease

van Loon, N. M., Lindholm, D. & Zelcer, N., Jun 2019, In : Current Opinion in Lipidology. 30, 3, p. 192-197 6 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

The life of proteins

Meri, S. & Baumann, M., 2001, In : Biomolecular engineering. 18, p. 193-194 2 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

The role of lipid-protein interactions in amyloid-type protein fibril formation: review

Gorbenko, G. & Kinnunen, P., 2006, In : Chemistry and Physics of Lipids. 141, p. 72-82 11 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Three-dimensional models of cancer for pharmacology and cancer cell biology: Capturing tumor complexity in vitro/ex vivo

Hickman, J. A., Graeser, R., de Hoogt, R., Vidic, S., Brito, C., Gutekunst, M., van der Kuip, H., IMI PREDECT Consortium, Kallioniemi, O., Klefström, J. & Monni, O. M., Sep 2014, In : Biotechnology Journal. 9, 9, p. 1115-1128 14 p.

Research output: Contribution to journalReview ArticleScientificpeer-review