Doctoral school in biological, environmental and food sciences

  • Finland

  • Finland

Publications 1998 2019

2019

A case study on the re-establishment of the cyanolichen symbiosis: where do the compatible photobionts come from?

Cardós, J. L. H., Prieto, M., Jylhä, M. J., Aragón, G., Molina, M. C., Martínez, I. & Rikkinen, J., 22 Apr 2019, In : Annals of Botany. 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access

ANALYSIS OF THE LONG-TERM POPULATION DYNAMICS OF SMALL MAMMALS IN FOREST ECOSYSTEMS OF EURASIA (ON THE EXAMPLE OF MYODES spp.))

Kurhinen, J., Ovaskainen, O., Ivanter, E., Levykh, A., Khlijap, L., Kuznetsova, I. & Saburova, L., Apr 2019, International Scientific Symposium:Ecology and evolution: New challenges. Ekaterinburg, Russia, April 1–5, 2019.p. 65-68.. p. 65-68 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

An annotated checklist of the bryophytes of Taita Hills region, Kenya

Enroth, J., Pocs, T., He, X., Nyqvist, P., Stam, Å. C. S., Malombe, I. & Rikkinen, J. K., 1 Jul 2019, In : Acta Musei Silesiae. Scientiae Naturales. 68, 1-2, p. 53–66 14 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Antibacterial polymer fibres by rosin compounding and melt-spinning

Kanerva, M., Puolakka, A., Takala, T. M., Elert, A. M., Mylläri, V., Jönkkäri, I., Sarlin, E., Seitsonen, J., Ruokolainen, J., Saris, P. & Vuorinen, J., 8 May 2019, In : Materials Today Communications.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Antibacterial potential of the Rubiaceae species Xeromphis nilotica (Stapf) and Gardenia lutea Fresen

Salih, E., Luukkanen, O., Kanninen, M. & Fyhrquist, P. J., 1 Jul 2019, p. 1-1. 1 p.

Research output: Conference materialsPosterResearchpeer-review

Open Access

Antibiotic resistance in European wastewater treatment plants mirrors the pattern of clinical antibiotic resistance prevalence

Parnanen, K. M. M., Narciso-da-Rocha, C., Kneis, D., Berendonk, T. U., Cacace, D., Thi Thuy Do, Elpers, C., Fatta-Kassinos, D., Henriques, I., Jaeger, T., Karkman, A., Luis Martinez, J., Michael, S. G., Michael-Kordatou, I., O'Sullivan, K., Rodriguez-Mozaz, S., Schwartz, T., Sheng, H., Sorum, H., Stedtfeld, R. D. & 6 othersTiedje, J. M., Varela Della Giustina, S., Walsh, F., Vaz-Moreira, I., Virta, M. & Manaia, C. M., Mar 2019, In : Science Advances. 5, 3, 10 p., 9124.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Berries as a potential transmission vehicle for taeniid eggs

Malkamäki, S., Näreaho, A. S., Oksanen, A. & Sukura, A. K. K., 2019, In : Parasitology International. 70, p. 58-63

Research output: Contribution to journalArticleScientificpeer-review

Open Access

Bike sharing as part of urban mobility in Helsinki – a user perspective

Willberg, E., 2019, Helsinki. 94 p.

Research output: ThesisMaster's thesisTheses

Can we really predict a catastrophic worldwide decline of entomofauna and its drivers?

Cardoso, P., Branco, V. V., Chichorro, F., Fukushima, C. S. & Macías-Hernández, N., 9 Apr 2019, In : Global Ecology and Conservation. 20, 2 p., e00621.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Carbon sink and CarbonSink+: from observations to global potential

Kalliokoski, T., Aalto, T., Bäck, J., Ezhova, E., Franz, D., Haapanala, S., Juurola, E., Kerminen, V-M., Kolari, P., Kulmala, L., Liski, J., Mammarella, I., Matkala, L., Petäjä, T., Rantala, P., Vesala, T. & Kulmala, M., 2019, 77 p. University of Helsinki.

Research output: Other contributionResearch

Open Access
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Characterization of the interaction of the antifungal and cytotoxic cyclic glycolipopeptide hassallidin with sterol-containing lipid membranes.

Humisto, A., Jokela, J., Teigen, K., Wahlsten, M., Permi, P., Sivonen, K. & Herfindal, L., 1 Aug 2019, In : Biochimica et Biophysica Acta. Biomembranes. 1861, p. 1510-1521 11 p.

Research output: Contribution to journalArticleScientificpeer-review

CLADOCERA AS SENTINELS OF AQUATIC MINE POLLUTION

Leppänen, J. J., 5 Apr 2019

Research output: ThesisDoctoral ThesisCollection of Articles

Open Access
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Collaboration and shared logic for creating value-added in three Finnish wooden multi-storey building projects

Toppinen, A., Miilumäki, N., Vihemäki, H., Toivonen, R. & Lähtinen, K., 5 Aug 2019, (Accepted/In press) In : Wood Material Science and Engineering. 31 p.

Research output: Contribution to journalArticleScientificpeer-review

Combined Effects of Environmental Drivers on Marine Trophic Groups – A Systematic Model Comparison

Ehrnsten, E., Bauer, B. & Gustafsson, B. G., 2 Aug 2019, In : Frontiers in Marine Science. 6

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Comparing economic and biological management objectives in the commercial Baltic salmon fisheries

Holma, M., Lindroos, M., Romakkaniemi, A. & Oinonen, S., Feb 2019, In : Marine Policy. 100, p. 207-214 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Comparison of population-based algorithms for optimizing thinnings and rotation using a process-based growth model

Xue, H., Mäkelä-Carter, A. A., Vanclay, J., Valsta, L. T. & Cao, T., 26 Feb 2019, In : Scandinavian Journal of Forest Research. 34, 6, p. 458-468 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access

Consumers’ perceptions on the properties of wood affecting their willingness to live in and prejudices against houses made of timber

Lähtinen, K., Harju, C. & Toppinen, A., 31 May 2019, In : Wood Material Science and Engineering. 6 p.

Research output: Contribution to journalArticleScientificpeer-review

Detection of the dispersion and residence of volcanic SO2⁠ and sulfate aerosol from Nabro in 2011

Liu, Y., Pellikka, P., Li, H. & Fang, X., 15 Jan 2019, In : Atmospheric Environment. 197, p. 36-44 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access

Differential abundance analyses of human microbiota in Parkinson’s disease

Aho, V. T. E., 29 Mar 2019, Helsinki: University of Helsinki. 72 p.

Research output: ThesisDoctoral ThesisCollection of Articles

Diverse Environmental Microbiota as a Tool to Augment Biodiversity in Urban Landscaping Materials

Hui, N., Grönroos, M., Roslund, M. I., Parajuli, A., Vari, H. K., Soininen, L., Laitinen, O. H., Sinkkonen, A. & The ADELE Research Group, 22 Mar 2019, In : Frontiers in Microbiology. 10, 10 p., 536.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Draft genome sequences of three monokaryotic isolates of the white-rot basidiomycete fungus Dichomitus squalens

Casado López, S., Peng, M., Daly, P., Andreopoulos, B., Pangilinan, J., Lipzen, A., Riley, R., Ahrendt, S., Ng, V., Barry, K., Daum, C., Grigoriev, I. V., Hilden, S. K., Mäkelä, M. R. & de Vries, R. P., 2019, (Accepted/In press) In : Microbiology Resource Announcements.

Research output: Contribution to journalArticleScientificpeer-review

Dual RNA-seq analysis provides new insights into interactions between Norway spruce and necrotrophic pathogen Heterobasidion annosum s.l.

Kovalchuk, A., Zeng, Z., Ghimire, R. P., Kivimäenpää, M., Raffaello, T., Liu, M., Mukrimin, M., Kasanen, R. A. O., Sun, H., Julkunen-Tiitto, R., Holopainen, J. K. & Asiegbu, F. O., 3 Jan 2019, In : BMC Plant Biology. 19, 2, 17 p., 2.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Economic Insights in Ecological Compensations: Market Analysis With an Empirical Application to the Finnish Economy

Kangas, J. & Ollikainen, M., May 2019, In : Ecological Economics. 159, p. 54-67 14 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Ecosystem responses to increased organic carbon concentration: comparing results based on longterm monitoring and whole-lake experimentation

Kankaala, P., Arvola, L., Hiltunen, M., Huotari, J., Jones, R. I., Hannu, N., Ojala, A., Olin, M., Peltomaa, E., Peura, S., Rask, M., Tulonen, T. & Vesala, S., 30 Jul 2019, In : Inland waters.

Research output: Contribution to journalArticleScientificpeer-review

Effect of Donor Simvastatin Treatment on Gene Expression Profiles in Human Cardiac Allografts during Ischemia-Reperfusion Injury

Krebs, R., Kankainen, M., Holmström, E., Dhaygude, K., Lukac, J., Ojala, T., Mattila, P., Nykänen, A. & Lemström, K., Apr 2019, In : Journal of Heart and Lung Transplantation. 38, 4, Supplement, p. S75-S76

Research output: Contribution to journalConference articleScientificpeer-review

Effect of water deficit stress on seedling biomass and physio-chemical characteristics in different species of wheat possessing the D genome.

Pour-Aboughadareh, A., Omidi, M., NAGHAVI, M., Etminan, A., MEHRABI, AA., Poczai, P. & BIAT, H., 2019, (Submitted) In : Agronomy.

Research output: Contribution to journalArticleScientificpeer-review

Effects of allochthonous DOM input on microbial composition and nitrogen cycling genes at two contrasting estuarine sites

Happel, E. M., Trine, M., Teikari, J., Huchaiah, V., Alneberg, J., Andersson, A. F., Sivonen, K., Middelboe, M., Kisand, V. & Riemann, L., 2019, (Accepted/In press) In : FEMS Microbiology Ecology.

Research output: Contribution to journalArticleScientificpeer-review

ELIMÄKI locus is required for mechanosensing and proprioception in birch trees

Helariutta, Y., 2019, (Submitted) In : Nature plants.

Research output: Contribution to journalArticleScientificpeer-review

Eliminating vicine and convicine, the main anti-nutritional factors restricting faba bean usage

Khazaei, H., Purves, R. W., Hughes, J., Link, W., O'Sullivan, D. M., Schulman, A. H., Björnsdotter, E., Geu-Flores, F., Nadzieja, M., Andersen, S. U., Stougaard, J., Vandenberg, A. & Stoddard, F. L., 2 Aug 2019, In : Trends in Food Science & Technology. 91, p. 549-556 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Elintarvikkeiden Oiva-valvontaa pitää kehittää

Kaskela, J. A., Ollila, S. A., Vainio, S. A. & Lunden, J. M., 2019, In : Kehittyvä Elintarvike. 30, 1, p. 30-31 2 p.

Research output: Contribution to journalArticleProfessional

Enantiospecific pharmacogenomics of fluvastatin

Hirvensalo, P., Tornio, A., Neuvonen, M., Kiander, W., Kidron, H., Paile-Hyvärinen, M., Tapaninen, T., Backman, J. T. & Niemi, M., 16 Apr 2019, In : Clinical Pharmacology and Therapeutics.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Engineering hemicellulose-lignin complexes? extraction for obtaining emulsion stabilizing hydrocolloids

Grenman, H., Rissanen, J., Lagerquist, L., Eklund, P., Lius, E., Lahtinen, M. & Mikkonen, K. S., 2019.

Research output: Conference materialsAbstractResearchpeer-review

Enrichment of intracellular sulphur cycle –associated bacteria in intertidal benthic foraminifera revealed by 16S and aprA gene analysis

Salonen, I., Chronopoulou, M., Bird, C., Reichart, G-J. & Koho, K., 12 Aug 2019, In : Scientific Reports. 9, 11692.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Environmentally-compatible alkyd paints stabilized by wood hemicelluloses

Mikkonen, K. S., Kirjoranta, S., Xu, C., Hemming, J., Pranovich, A., Bhattarai, M., Peltonen, L., Kilpeläinen, P., Maina, N., Tenkanen, M., Lehtonen, M. & Willför, S., 16 Mar 2019, In : Industrial Crops and Products. 133, p. 212-220

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Fecal pollution can explain antibiotic resistance gene abundances in anthropogenically impacted environments

Karkman, A., Parnanen, K. & Larsson, D. G. J., 8 Jan 2019, In : Nature Communications. 10, 8 p., 80.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Fermentation Biotechnology Applied to Cereal Industry By-Products: Nutritional and Functional Insights

Verni, M., Rizzello, C. G. & Coda, R., 12 Apr 2019, In : Frontiers in nutrition. 6

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Festetics’ ‘Genetic laws of Nature’ considered in relation to the prevailing concept of blood inheritance.

Wood, R. J., T. Szabó, A. & Poczai, P., 2019, (Submitted) In : Journal of the History of Biology.

Research output: Contribution to journalArticleScientificpeer-review

Forage Fish as Food: Consumer Perceptions on Baltic Herring

Pihlajamäki, M-E., Asikainen, A., Ignatius, S., Haapasaari, P. & Tuomisto, J., 2019, In : Sustainability. 11, p. 1-17 17 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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FORESAIL-1 cubesat mission to measure radiation belt losses and demonstrate de-orbiting

Palmroth, M., Praks, J., Vainio, R., Janhunen, P., Kilpua, E. K. J., Ganushkina, N. Y., Afanasiev, A., Ala-Lahti, M., Alho, A., Asikainen, T., Asvestari, E., Battarbee, M., Binios, A., Bosser, A., Brito, T., Envall, J., Ganse, U., George, H., Gieseler, J., Good, S. & 39 othersGrandin, M., Haslam, S., Hedman, H-P., Hietala, H., Jovanovic, N., Kakakhel, S., Kalliokoski, M., Kettunen, V. V., Koskela, T., Lumme, E., Meskanen, M., Morosan, D., Mughal, M. R., Niemelä, P., Nyman, S., Oleynik, P., Osmane, A., Palmerio, E., Pfau-Kempf, Y., Peltonen, J., Plosila, J., Polkko, J., Poluianov, S., Pomoell, J., Price, D., Punkkinen, A., Punkkinen, R., Riwanto, B., Salomaa, L., Slavinskis, A., Säntti, T., Tammi, J., Tenhunen, H., Toivanen, P., Tuominen, J., Turc, L., Valtonen, E., Virtanen, P. & Westerlund, T., 21 May 2019, (Accepted/In press) In : Journal of geophysical research. Space physics. 0, ja

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Frequency of virus-resistant hosts determines experimental community dynamics.

Coloma, S. E., Gaedge, U., Sivonen, A. K. & Hiltunen, T. J., Jan 2019, In : Ecology. p. 1-9 9 p., ECY2554.

Research output: Contribution to journalArticleScientificpeer-review

Fruit, Vegetable, and Fibre Intake among Finnish Preschoolers in Relation to Preschool-Level Facilitators and Barriers to Healthy Nutrition

Lehto, R., Ray, C., Korkalo, L., Vepsäläinen, H., Nissinen, K. M., Koivusilta, L., Roos, E. & Erkkola, M., 2019, In : Nutrients.

Research output: Contribution to journalArticleScientificpeer-review

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Gametophytic transcriptomics of an early embryophyte (Blasia pusilla) and comparative landscape of gametophyte evolution

Sablok, G., He, X., Miranto, M., Peltomaa, E., Flores, J., Sleith, R., Karol, K., Delwiche, C., Bell, N., Paulin, L., Poczai, P. & Hyvönen, J., 26 Jun 2019.

Research output: Conference materialsPosterResearchpeer-review

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Genome-wide association studies targeting the yield of extraembryonic fluid and production traits in Russian White chickens

Kudinov, A. A., Dementieva, N. V., Mitrofanova, O. V., Stanishevskaya, O. I., Fedorova, E. S., Larkina, T. A., Mishina, A. I., Plemyashov, K. V., Griffin, D. K. & Romanov, M. N., 4 Apr 2019, In : BMC Genomics. 20, 1, 12 p., 270.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Open Access
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Grand Challenges in Fungal Biotechnology: Progress and research needs of plant biomass degradation by basidiomycete fungi

Mäkelä, M., Hilden, K., Kowalczyk, J. & Hatakka, A., 2019, Grand Challenges in Fungal Biotechnology.

Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

Heavy metal content and health risk assessment of commonly patronized herbal medicinal preparations from the Kumasi metropolis of Ghana

Adusei-Mensah, F., Essumang, D. K., Agjei, R. O., Kauhanen, J., Tikkanen-Kaukanen, C. & Ekor, M., 2019, In : Journal of environmental health science & engineering.

Research output: Contribution to journalArticleScientificpeer-review