Doctoral school in biological, environmental and food sciences

  • Finland

  • Finland

Publications 1998 2019

2019

Skenaarioanalyysi metsien kehitystä kuvaavien mallien ennusteiden yhtäläisyyksistä ja eroista

Kalliokoski, T., Heinonen, T., Holder, J., Lehtonen, A., Mäkelä, A., Minunno, F., Ollikainen, M., Packalen, T., Peltoniemi, M., Pukkala, T., Salminen, O., Schelhaas, M-J., Seppälä, J., Vauhkonen, J. & Kanninen, M., 2019, Suomen ilmastopaneeli. 88 p.

Research output: Book/ReportCommissioned reportProfessional

Open Access

Specifying the design for customer learning in the mixed reality experience

Holopainen, J., Vehviläinen, R., Mattila, O., Pöyry, E. & Parvinen, P., 2019, (Accepted/In press) Communications in Computer and Information Science. Fourth International Conference, DTGS 2019, St. Petersburg, Russia, 19 – 21 June, 2019. Cham: Springer International Publishing AG

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

STABILITYSOFT: a new online program to calculate parametric and non-parametric stability statistics for crop traits

Pour-Aboughadareh, A., Yousefian, M., Moradkhani, H., Poczai, P. & Siddique, K. HM., 15 Jan 2019, In : Applications in Plant Sciences. 7, 1, 6 p., 1211.

Research output: Contribution to journalEditorialScientificpeer-review

Open Access
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Stages of User Engagement on Social Commerce Platforms: Analysis with the Navigational Clickstream Data

Kumar, A., Salo, J. & Li, H., 3 Apr 2019, In : International journal of electronic commerce. 23, 2, p. 179-211 33 p.

Research output: Contribution to journalArticleScientificpeer-review

Stand type affects fluxes of volatile organic compounds from the forest floor in hemiboreal and boreal climates

Mäki, M., Krasnov, D., Hellén, H., Noe, S. M. & Bäck, J., 24 May 2019, In : Plant and Soil. 441, 1, p. 363-381 19 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Temporal variation in indoor transfer of dirt-associated environmental bacteria in agricultural and urban areas

Parajuli, A., Hui, N., Puhakka, R., Grönroos, M., Selonen, V. A. O., Roslund, M., Vari, H., Siter, N., Nurminen, N., Oikarinen, S., Laitinen, O., Rajaniemi, J., Hyöty, H. & Sinkkonen, A., 2019, In : Environment International. 132, 105069

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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The beaver facilitates species richness and abundance of terrestrial and semi-aquatic mammals

Nummi, P., Liao, W., Huet, O., Scarpulla, E. & Sundell, J., 2019, In : Global Ecology and Conservation. 20, 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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The Biosynthesis of Rare Homo-Amino Acid Containing Variants of Microcystin by a Benthic Cyanobacterium

Shishido, T. K., Jokela, J., Humisto, A., Suurnäkki, S., Wahlsten, M., Oliveria de Alvarenga, D., Sivonen, K. & Fewer, D., 7 May 2019, In : Marine Drugs. 17, 5, p. 1 16 p., 271.

Research output: Contribution to journalArticleScientificpeer-review

Open Access

The contribution of preschool meals to the diet of Finnish preschoolers

Korkalo, L., Nissinen, K. M., Skaffari, E., Vepsäläinen, H., Lehto, R., Kaukonen, R. E., Koivusilta, L., Sajaniemi, N., Roos, E. & Erkkola, M., Jul 2019, In : Nutrients.

Research output: Contribution to journalArticleScientificpeer-review

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The effect of knowledge, species aesthetic appeal, familiarity and conservation need on willingness to donate

Lundberg, P. K., Vainio, S. A., MacMillan, D. C., Smith, B., Verissimo, D. & Arponen, A. K. I., 4 Jan 2019, In : Animal Conservation.

Research output: Contribution to journalArticleScientificpeer-review

The emergence of genetics from Festetics’ sheep through Mendel’s peas to Bateson’s chickens

T. Szabó, A. & Poczai, P., Jun 2019, In : Journal of Genetics. 98, 2, 7 p., 63.

Research output: Contribution to journalArticleScientificpeer-review

The emergence of private land conservation in scientific literature: a review

Cortes Capano, G., Toivonen, T., Soutullo, A. & Di Minin, E., 2019, In : Biological Conservation. 237, p. 191-199

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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The genome of cowpea (Vigna unguiculata [L.] Walp.)

Lonardi, S., Muñoz-Amatriaín, M., Liang, Q., Shu, S., Wanamaker, S. I., Lo, S., Tanskanen, J., Schulman, A. H., Zhu, T., Luo, M-C., Alhakami, H., Ounit, R., Hasan, A. M., Verdier, J., Roberts, P. A., Santos, J. R. P., Ndeve, A., Doležel, J., Vrána, J., Hokin, S. A. & 3 othersFarmer, A. D., Cannon, S. B. & Close, T. J., Jun 2019, In : Plant Journal. 98, 5, p. 767-782 16 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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The Good, the Coachman and the Sheep Breeders’ Society of Moravia: How Political Repression Stifled the Nascent Foundations of Heredity Research Prior to Mendel

Poczai, P., Sekerák, J., Bariska, I. & T. Szabó, A., 2019, (Submitted) In : Journal of the History of Biology.

Research output: Contribution to journalArticleScientificpeer-review

The private sector: Can zero deforestation commitments save tropical forests?

Pacheco, P., Bakhtary, H., Camargo, M. C., Donofrio, S., Drigo, I. & Mithöfer, D., Dec 2019, Transforming REDD+: Lessons and new directions. Angelsen, A., Martius, C., De Sy, V., Duchelle, AE., Larson, AM. & Pham, TT. (eds.). 1 ed. Bogor, Indonesia: CIFOR, Vol. 1. p. 161-173 13 p.

Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

The role of temporal focus and self-congruence on consumer preference and willingness to pay A new scrutiny in branding strategy

Tan, T. M., Salo, J., Juntunen, J. & Kumar, A., 7 Jan 2019, In : European Journal of Marketing. 53, 1, p. 37-62 26 p.

Research output: Contribution to journalArticleScientificpeer-review

Towards risk-based meat inspection: Prerequisites of risk-based meat inspection of pigs in Finland

Felin, E., Jun 2019

Research output: ThesisDoctoral ThesisCollection of Articles

Open Access

Transcriptional regulatory framework for vascular cambium development in Arabidopsis roots.

Helariutta, Y., 19 Aug 2019, (Accepted/In press) In : Nature plants.

Research output: Contribution to journalArticleScientificpeer-review

Under-ice metabolism in a shallow lake in a cold and arid climate zone

Song, S., Li, C., Shi, X., Zhao, S., Tian, W., Li, Z., Bai, Y., Cao, X., Wang, Q., Huotari, J., Tulonen, T., Uusheimo, S., Leppäranta, M., Loehr, J. & Arvola, L., 2019, In : Freshwater Biology.

Research output: Contribution to journalArticleScientificpeer-review

Unraveling salinity stress responses in ancestral and neglected wheat species: a baseline for conservation and utilization in future wheat improvement programs

Ahmadi, J., Pour-Aboughadareh, A., Fabriki-Ourang, S., Khalili, P. & Poczai, P., 2019, (Submitted) In : Physiology and Molecular Biology of Plants.

Research output: Contribution to journalArticleScientificpeer-review

Viherpihalta hyvinvointia ja terveyttä

Puhakka, R., Roslund, M., Tahvonen, O. & Sinkkonen, A., 17 May 2019, In : Puutarha & kauppa. 2019, 9, p. 33 1 p.

Research output: Contribution to journalArticleProfessional

Open Access

Virtual reality as a recovering environment - Implications for design principles

Lähtevänoja, A. J., Holopainen, J., Mattila, O., Södervik, I., Parvinen, P. & Pöyry, E., 2019, (Accepted/In press) Communications in Computer and Information Science. Fourth International Conference, DTGS 2019, St. Petersburg, Russia, 19 – 21 June, 2019. Cham: Springer International Publishing AG

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Open Access

Why study intraspecific variation: a comment on Harding et al.

Candolin, U., 14 Aug 2019, (Accepted/In press) In : Behavioral Ecology.

Research output: Contribution to journalComment/debateScientificpeer-review

2018

«ЛЕТОПИСЬ ПРИРОДЫ ЕВРАЗИИ» КАК ОСНОВА КРУПНОМАСШТАБНЫХ ИССЛЕДОВАНИЙ БИОЛОГИЧЕСКОГО РАЗНООБРАЗИЯ БИОМА ТАЕЖНЫХ ЛЕСОВ

Kurhinen, J., Ovaskainen, O., Meyke, E., Bolshakov, V., Prokhorov, I., Levykh, A. & Delgado, M., 26 Dec 2018, «Экологический мониторинг и биоразнообразие» : материалы Всероссийской (с международным участием) научно-практической конференции. Ишим : Изд-во ИПИ им. П.П. Ершова (филиала) ТюмГУ: Tjumen University, Vol. 2018. p. 175-176 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

A comparative study of creation of self-brand connection amongst well-liked, new, and unfavorable brands

Tan, T. M., Salo, J., Juntunen, J. & Kumar, A., Nov 2018, In : Journal of Business Research. 92, p. 71-80 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Akkermansia muciniphila induces gut microbiota remodelling and controls islet autoimmunity in NOD mice

Hänninen, A., Toivonen, R., Pöysti, S., Belzer, C., Plovier, H., Ouwerkerk, J. P., Emani, R., Cani, P. D. & De Vos, W. M., Aug 2018, In : Gut. 67, 8, p. 1445-1453 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Akkermansia muciniphila in the Human Gastrointestinal Tract: When, Where, and How?

Geerlings, S. Y., Kostopoulos, I., de Vos, W. M. & Belzer, C., 23 Jul 2018, In : Microorganisms. 6, 3, 26 p., 75.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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A low FODMAP diet is associated with changes in the microbiota and reduction in breath hydrogen but not colonic volume in healthy subjects

Sloan, T. J., Jalanka, J., Major, G. A. D., Krishnasamy, S., Pritchard, S., Abdelrazig, S., Korpela, K., Singh, G., Mulvenna, C., Hoad, C. L., Marciani, L., Barrett, D. A., Lomer, M. C. E., de Vos, W. M., Gowland, P. A. & Spiller, R. C., 26 Jul 2018, In : PLoS One. 13, 7, 18 p., 0201410.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Älykäs valtio tunnistaa kaupunkien potentiaalin

Vaattovaara, M. K., 2018, In : Kehittyvät kaupungit-sivusto.

Research output: Contribution to journalArticleProfessional

Open Access

Anaerobic Microbial Dechlorination of Polychlorinated Dibenzo-p-dioxins and Dibenzofurans in Contaminated Kymijoki River Sediments

Mäntynen, S., 2018, Helsinki: Helsingin yliopisto.

Research output: ThesisDoctoral ThesisCollection of Articles

Open Access

Analysing Ecological Communities with Joint Species Distribution Models

Norberg, A., 2018, Helsinki: Helsingin yliopisto.

Research output: ThesisDoctoral ThesisCollection of Articles

Open Access

A novel acetyl xylan esterase enabling complete deacetylation of substituted xylans

Razeq, F. M., Jurak, E., Stogios, P. J., Yan, R., Tenkanen, M., Kabel, M. A., Wang, W. & Master, E. R., 22 Mar 2018, In : Biotechnology for Biofuels. 11, 12 p., 74.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Antifungal and Antileukemic Compounds from Cyanobacteria: Bioactivity, Biosynthesis, and Mechanism of Action

Humisto, A. K., 23 Nov 2018, Helsinki: University of Helsinki. 72 p.

Research output: ThesisDoctoral ThesisCollection of Articles

Open Access

Aquatic Invertebrates in Särkkäniemi

Liao, W., 2018, 5 p.

Research output: Book/ReportCommissioned reportProfessional

File

Arabidopsis downy mildew effector HaRxL106 suppresses plant immunity by binding to RADICAL-INDUCED CELL DEATH1

Wirthmueller, L., Asai, S., Rallapalli, G., Sklenar, J., Fabro, G., Kim, D. S., Lintermann, R., Jaspers, P., Wrzaczek, M., Kangasjärvi, J., MacLean, D., Menke, F. L. H., Banfield, M. J. & Jones, J. D. G., Oct 2018, In : New Phytologist. 220, 1, p. 232-248 17 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Arabidopsis MLO2 is a negative regulator of sensitivity to extracellular reactive oxygen species

Cui, F., Wu, H., Safronov, O., Zhang, P., Kumar, R., Kollist, H., Salojärvi, J. T., Panstruga, R. & Overmyer, K. L., Apr 2018, In : Plant, Cell and Environment. 41, 4, p. 782-796 15 p.

Research output: Contribution to journalArticleScientificpeer-review

Assembly and Analysis of Unmapped Genome Sequence Reads Reveal Novel Sequence and Variation in Dogs

Holden, L. A., Arumilli, M., Hytonen, M. K., Hundi, S., Salojärvi, J., Brown, K. H. & Lohi, H., 18 Jul 2018, In : Scientific Reports. 8, 11 p., 10862.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Assessing scale-wise similarity of curves with a thick pen: As illustrated through comparisons of spectral irradiance

Hartikainen, S. M., Jach, A., Grane, A. & Robson, T. M., Oct 2018, In : Ecology and Evolution. 8, 20, p. 10206-10218 13 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Assessing the genetic differentiation of Holstein cattle herds in the Leningrad region using Fst statistics

Smaragdov, M. G., Kudinov, A. A. & Uimari, P., 2018, In : Agricultural and Food Science. 27, 2, p. 96-101 6 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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A Systems Approach to Study Immuno- and Neuro-Modulatory Properties of Antiviral Agents

Zusinaite, E., Ianevski, A., Niukkanen, D., Poranen, M. M., Bjoras, M., Afset, J. E., Tenson, T., Velagapudi, V., Merits, A. & Kainov, D. E., Aug 2018, In : Viruses. 10, 8, 13 p., 423.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Automated social media content analysis from urban green areas – Case Helsinki

Heikinheimo, V. V., Tenkanen, H. T. O., Hiippala, T., Järv, O. & Toivonen, T. K., 2018, Spatial Big Data and Machine Learning in GIScience: Workshop at GIScience 2018. Raubal, M., Wang, S., Guo, M., Jonietz, D. & Kiefer, P. (eds.). p. 40-43 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionProfessional

Open Access

Bacterial community changes in response to oil contamination and perennial crop cultivation

Yan, L., Penttinen, P., Mikkonen, A. & Lindstrom, K., May 2018, In : Environmental Science and Pollution Research. 25, 15, p. 14575-14584 10 p.

Research output: Contribution to journalArticleScientificpeer-review