• Viikinkaari 9 (PL 56), Biocenter 1

    00790 Helsinki

    Finland

Publications

2020

Beyond large-effect loci: large-scale GWAS reveals a mixed large-effect and polygenic architecture for age at maturity of Atlantic salmon

Sinclair-Waters, M., Odegard, J., Korsvoll, S. A., Moen, T., Lien, S., Primmer, C. R. & Barson, N. J., 12 Feb 2020, In : Genetics Selection Evolution. 52, 1, 11 p., 9.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Conservation and Management of Salmon in the Age of Genomics

Waples, R. S., Naish, K. A. & Primmer, C. R., 2020, ANNUAL REVIEW OF ANIMAL BIOSCIENCES. Lewin, HA. & Roberts, RM. (eds.). Annual Reviews, Vol. 8. p. 117-143 27 p. (Annual Review of Animal Biosciences; vol. 8).

Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

Modular chromosome rearrangements reveal parallel and nonparallel adaptation in a marine fish

Kess, T., Bentzen, P., Lehnert, S. J., Sylvester, E. V. A., Lien, S., Kent, M. P., Sinclair-Waters, M., Morris, C. J., Wringe, B., Fairweather, R. & Bradbury, I. R., 11 Jan 2020, In : Ecology and Evolution. 10, 2, p. 638–653 16 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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mRNA Extraction from Gill Tissue for RNA-sequencing

Verta, J-P. & Jones, F., 1 Mar 2020, In : Bio-Protocol. 10, 5, e3539.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Time spent in distinct life-history stages has sex-specific effects on reproductive fitness in wild Atlantic salmon

Mobley, K. B., Granroth-Wilding, H., Ellmen, M., Orell, P., Erkinaro, J. & Primmer, C. R., Mar 2020, In : Molecular Ecology. 29, 6, p. 1173-1184 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Open Access
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2019

Alternative respiratory chain enzymes: Therapeutic potential and possible pitfalls

Saari, S., Garcia, G. S., Bremer, K., Chioda, M. M., Andjelković, A., Debes, P. V., Nikinmaa, M., Szibor, M., Dufour, E., Rustin, P., Oliveira, M. T. & Jacobs, H. T., 1 Apr 2019, In : Biochimica et Biophysica Acta. Molecular Basis of Disease. 1865, 4, p. 854-866 13 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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A migration-associated supergene reveals loss of biocomplexity in Atlantic cod

Kess, T., Bentzen, P., Lehnert, S. J., Sylvester, E. V. A., Lien, S., Kent, M. P., Sinclair-Waters, M., Morris, C. J., Regular, P., Fairweather, R. & Bradbury, I. R., 26 Jun 2019, In : Science Advances. 5, 6, 8 p., 2461.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Co-inheritance of sea age at maturity and iteroparity in the Atlantic salmon vgll3 genomic region

Aykanat, T., Ozerov, M., Vähä, J-P., Orell, P., Niemelä, E., Erkinaro, J. & Primmer, C. R., Apr 2019, In : Journal of Evolutionary Biology. 32, 4, p. 343-355 13 p.

Research output: Contribution to journalArticleScientificpeer-review

Evolutionary stasis of a heritable morphological trait in a wild fish population despite apparent directional selection

O'Sullivan, R. J., Aykanat, T., Johnston, S. E., Kane, A., Poole, R., Rogan, G., Prodöhl, P. A., Primmer, C. R., McGinnity, P. & Reed, T. E., Jun 2019, In : Ecology and Evolution. 9, 12, p. 7096-7111 16 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Heritability estimation via molecular pedigree reconstruction in a wild fish population reveals substantial evolutionary potential for sea age at maturity, but not size within age classes

Reed, T. E., Prodohl, P., Bradley, C., Gilbey, J., McGinnity, P., Primmer, C. R. & Bacon, P. J., May 2019, In : Canadian Journal of Fisheries and Aquatic Sciences. 76, 5, p. 790-805 16 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Home ground advantage: Local Atlantic salmon have higher reproductive fitness than dispersers in the wild

Mobley, K. B., Granroth-Wilding, H., Ellmen, M., Vaha, J-P., Aykanat, T., Johnston, S. E., Orell, P., Erkinaro, J. & Primmer, C. R., Feb 2019, In : Science Advances. 5, 2, 8 p., 1112.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Life history variation across four decades in a diverse population complex of Atlantic salmon in a large subarctic river

Erkinaro, J., Czorlich, Y., Orell, P., Kuusela, J., Falkegård, M., Länsman, M., Pulkkinen, H., Primmer, C. & Niemelä, E., Jan 2019, In : Canadian Journal of Fisheries and Aquatic Sciences. 76, 1, p. 42-55 14 p.

Research output: Contribution to journalArticleScientificpeer-review

Predominance of cis-regulatory changes in parallel expression divergence of sticklebacks

Verta, J-P. & Jones, F., 15 May 2019, In : eLife. 8, e43785, 30 p., 43785.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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The Chromosome-Level Genome Assembly of European Grayling Reveals Aspects of a Unique Genome Evolution Process Within Salmonids

Sävilammi, T., Primmer, C. R., Varadharajan, S., Guyomard, R., Guiguen, Y., Sandve, S. R., Vollestad, L. A., Papakostas, S. & Lien, S., May 2019, In : G3 - Genes genomes genetics. 9, 5, p. 1283-1294 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Understanding local adaptation in a freshwater salmonid fish: evolution of a research programme

Vollestad, L. A. & Primmer, C. R., 2019, In : ICES Journal of Marine Science. 76, 6, p. 1404-1414 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Utilization of Tissue Ploidy Level Variation in de Novo Transcriptome Assembly of Pinus sylvestris

Ojeda, D. I., Mattila, T. M., Ruttink, T., Kujala, S. T., Kärkkäinen, K., Verta, J-P. & Pyhäjärvi, T., Oct 2019, In : G3 - Genes genomes genetics. 9, 10, p. 3409-3421 13 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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2018

Association mapping reveals candidate loci for resistance and anaemic response to an emerging temperature-driven parasitic disease in a wild salmonid fish

Ahmad, F., Debes, P. V., Palomar, G. & Vasemagi, A., Mar 2018, In : Molecular Ecology. 27, 6, p. 1385-1401 17 p.

Research output: Contribution to journalArticleScientificpeer-review

Differential tissue growth and cell adhesion alone drive early tooth morphogenesis: an ex vivo and in silico study

Marin Riera, M., Moustakas-Verho, J., Savriama, Y., Jernvall, J. T. & Salazar Ciudad, I., Feb 2018, In : PLoS Computational Biology. 14, 2, 26 p., 1005981.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Genomic signatures of fine-scale local selection in Atlantic salmon suggest involvement of sexual maturation, energy homeostasis and immune defence-related genes

Pritchard, V. L., Makinen, H., Vähä, J-P., Erkinaro, J., Orell, P. & Primmer, C. R., Jun 2018, In : Molecular Ecology. 27, 11, p. 2560-2575 16 p.

Research output: Contribution to journalArticleScientificpeer-review

Genomic signatures of parasite-driven natural selection in north European Atlantic salmon (Salmo salar)

Zueva, K. J., Lumme, J., Veselov, A. E., Kent, M. P. & Primmer, C. R., Jun 2018, In : Marine Genomics. 39, p. 26-38 13 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Modularity Facilitates Flexible Tuning of Plastic and Evolutionary Gene Expression Responses during Early Divergence

Mäkinen, H., Sävilammi, T., Papakostas, S., Leder, E., Vøllestad, L. & Primmer, C. R., Jan 2018, In : Genome Biology and Evolution. 10, 1, p. 77-93 17 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Rapid sex-specific evolution of age at maturity is shaped by genetic architecture in Atlantic salmon

Czorlich, Y., Aykanat, T., Erkinaro, J., Orell, P. & Primmer, C. R., Nov 2018, In : Nature Ecology & Evolution. 2, 11, p. 1800-1807 8 p.

Research output: Contribution to journalArticleScientificpeer-review

2017

Environmental Causation of Turtle Scute Anomalies in ovo and in silico

Zimm, R., Bentley, B. P., Wyneken, J. & Moustakas-Verho, J. E., Dec 2017, In : Integrative and Comparative Biology. 57, 6, p. 1303-1311 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Harnessing the Power of Genomics to Secure the Future of Seafood

Bernatchez, L., Wellenreuther, M., Araneda, C., Ashton, D. T., Barth, J. M. I., Beacham, T. D., Maes, G. E., Martinsohn, J. T., Miller, K. M., Naish, K. A., Ovenden, J. R., Primmer, C. R., Suk, H. Y., Therkildsen, N. O. & Withler, R. E., Sep 2017, In : Trends in Ecology & Evolution. 32, 9, p. 665-680 16 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Non-invasive genetic monitoring involving citizen science enables reconstruction of current pack dynamics in a re-establishing wolf population

Granroth-Wilding, H., Primmer, C., Lindqvist, M., Poutanen, J., Thalmann, O., Aspi, J., Harmoinen, J., Kojola, I. & Laaksonen, T., 19 Dec 2017, In : BMC Ecology. 17, 44, 15 p., 44.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Patterning of the turtle shell

Moustakas-Verho, J., Cebra-Thomas, J. & Gilbert, S., 2017, In : Current Opinion in Genetics & Development. 45, p. 124-131 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Quantitative Genetic Variation in, and Environmental Effects on, Pathogen Resistance and Temperature-Dependent Disease Severity in a Wild Trout

Debes, P. V., Gross, R. & Vasemägi, A., Aug 2017, In : American Naturalist. 190, 2, p. 244-265 22 p.

Research output: Contribution to journalArticleScientificpeer-review

Rapid, broad-scale gene expression evolution in experimentally harvested fish populations

Uusi-Heikkilä, S., Sävilammi, T., Leder, E., Arlinghaus, R. & Primmer, C. R., Aug 2017, In : Molecular Ecology. 26, 15, p. 3954-3967 14 p.

Research output: Contribution to journalArticleScientificpeer-review