Faculty of Biological and Environmental Sciences

  • Viikinkaari 9

    HELSINKI

    Finland

Publications 1966 2020

2018

A Simple Strategy to Determine the Dependence of Membrane-Bound Pyrophosphatases on K+ as a Cofactor

Strauss, J., Wilkinson, C., Vidilaseris, K., Harborne, S. P. D. & Goldman, A., 2018, Phosphatases. Allen, K. N. (ed.). ACADEMIC PRESS INC ELSEVIER SCIENCE, p. 131-156 26 p. (Methods in Enzymology; vol. 607).

Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

A spatial overview of the global importance of Indigenous lands for conservation

Garnett, S. T., Burgess, N. D., Fa, J. E., Fernandez-Llamazares, A., Molnar, Z., Robinson, C. J., Watson, J. E. M., Zander, K. K., Austin, B., Brondizio, E. S., Collier, N. F., Duncan, T., Ellis, E., Geyle, H., Jackson, M. V., Jonas, H., Malmer, P., McGowan, B., Sivongxay, A. & Leiper, I., Jul 2018, In : Nature sustainability. 1, 7, p. 369-374 6 p.

Research output: Contribution to journalArticleScientificpeer-review

Assembly and Analysis of Unmapped Genome Sequence Reads Reveal Novel Sequence and Variation in Dogs

Holden, L. A., Arumilli, M., Hytonen, M. K., Hundi, S., Salojärvi, J., Brown, K. H. & Lohi, H., 18 Jul 2018, In : Scientific Reports. 8, 11 p., 10862.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Assessing scale-wise similarity of curves with a thick pen: As illustrated through comparisons of spectral irradiance

Hartikainen, S. M., Jach, A., Grane, A. & Robson, T. M., Oct 2018, In : Ecology and Evolution. 8, 20, p. 10206-10218 13 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Assessing the dynamics of natural populations by fitting individual-based models with approximate Bayesian computation

Siren, J., Lens, L., Cousseau, L. & Ovaskainen, O., May 2018, In : Methods in Ecology and Evolution. 9, 5, p. 1286-1295 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Assessing the efficiencies and challenges for nutrient uptake by aquatic plants

Angove, C., Norkko, A. & Gustafsson, C., Oct 2018, In : Journal of Experimental Marine Biology and Ecology. 507, p. 23-30 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Assessing the impacts of seabed mineral extraction in the deep sea and coastal marine environments: Current methods and recommendations for environmental risk assessment

Kaikkonen, L., Venesjärvi, R., Nygård, H. & Kuikka, S., Oct 2018, In : Marine Pollution Bulletin. 135, p. 1183-1197 15 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Assessing toxicity of metal contaminated soil from glassworks sites with a battery of biotests

Hagner, M., Romantschuk, M., Penttinen, O. -P., Egfors, A., Marchand, C. & Augustsson, A., 1 Feb 2018, In : Science of the Total Environment. 613, p. 30-38 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Assessment of Black Carbon in Arctic: Current Status and Potential Improvements

Soares, J., Geels, C., Langner, J., Tsyro, S., Kurganskiy, A., Strom, J., Gallet, J-C., Ruppel, M. & Sofiev, M., 2018, AIR POLLUTION MODELING AND ITS APPLICATION XXV. Mensink, C. & Kallos, G. (eds.). Springer-Verlag, p. 83-87 5 p. (Springer Proceedings in Complexity).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Assessment of eutrophication abatement scenarios for the Baltic Sea by multi-model ensemble simulations

Meier, H. E. M., Edman, M. K., Eilola, K. J., Placke, M., Neumann, T., Andersson, H. C., Brunnabend, S-E., Dieterich, C., Frauen, C., Friedland, R., Gröger, M., Gustafsson, B. G., Gustafsson, K. E., Isaev, A., Kniebusch, M., Kuznetsov, I., Muller-Karulis, B., Omstedt, A., Ryabchenko, V., Saraiva, S. & 1 othersSavchuk, O. P., 2018, In : Frontiers in Marine Science. 5, 24 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Association between awareness of environmental consequences, materialism and environmental philanthropic behavior among potential online donors

Lundberg, P., Vainio, A., Ojala, A. & Arponen, A., 27 May 2018. 1 p.

Research output: Conference materialsAbstractResearchpeer-review

Open Access

Association mapping reveals candidate loci for resistance and anaemic response to an emerging temperature-driven parasitic disease in a wild salmonid fish

Ahmad, F., Debes, P. V., Palomar, G. & Vasemagi, A., Mar 2018, In : Molecular Ecology. 27, 6, p. 1385-1401 17 p.

Research output: Contribution to journalArticleScientificpeer-review

Associations between glucocorticoids and sociality across a continuum of vertebrate social behavior

Raulo, A. & Dantzer, B., Aug 2018, In : Ecology and Evolution. 8, 15, p. 7697-7716 20 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Asymmetrical flow field-flow fractionation in purification of an enveloped bacteriophage φ 6

Lampi, M., Oksanen, H. M., Meier, F., Moldenhauer, E., Poranen, M. M., Bamford, D. H. & Eskelin, K., 15 Sep 2018, In : Journal of Chromatography. B. 1095, p. 251-257 7 p.

Research output: Contribution to journalArticleScientificpeer-review

A Systems Approach to Study Immuno- and Neuro-Modulatory Properties of Antiviral Agents

Zusinaite, E., Ianevski, A., Niukkanen, D., Poranen, M. M., Bjoras, M., Afset, J. E., Tenson, T., Velagapudi, V., Merits, A. & Kainov, D. E., Aug 2018, In : Viruses. 10, 8, 13 p., 423.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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A Theory of Predictive Dissonance: Predictive Processing Presents a New Take on Cognitive Dissonance

Kaaronen, R. O., 19 Nov 2018, In : Frontiers in Psychology. 9, 15 p., 2218.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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A transnational and holistic breeding approach is needed for sustainable wheat production in the Baltic Sea region

Chawade, A., Armoniene, R., Berg, G., Brazauskas, G., Frostgard, G., Geleta, M., Gorash, A., Henriksson, T., Himanen, K., Ingver, A., Johansson, E., Jorgensen, L. N., Koppel, M., Koppel, R., Makela, P., Ortiz, R., Podyma, W., Roitsch, T., Ronis, A., Svensson, J. T. & 2 othersVallenback, P. & Weih, M., Dec 2018, In : Physiologia Plantarum. 164, 4, p. 442-451 10 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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At which spatial and temporal scales can fungi indicate habitat connectivity?

Nordén, J., Åström, J., Josefsson, T., Blumentrath, S., Ovaskainen, O., Sverdrup-Thygeson, A. & Nordén, B., Aug 2018, In : Ecological Indicators. 91, p. 138-148 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Bacterial community changes in response to oil contamination and perennial crop cultivation

Yan, L., Penttinen, P., Mikkonen, A. & Lindstrom, K., May 2018, In : Environmental Science and Pollution Research. 25, 15, p. 14575-14584 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Baltic herring for food: Shades of grey in how backcasting recommendations work across exploratory scenarios

Sarkki, S. & Pihlajamäki, M-E., 2018, In : Technological Forecasting and Social Change. 139, p. 200-209 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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BARCOSEL: a tool for selecting an optimal barcode set for high-throughput sequencing

Somervuo, P., Koskinen, P., Mei, P., Holm, L., Auvinen, P. & Paulin, L., 5 Jul 2018, In : BMC Bioinformatics. 19, 257, 6 p., 257.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Bayesian latent factor approaches for modeling ecological species communities

Tikhonov, G., 2018, Helsinki: Helsingin yliopisto.

Research output: ThesisDoctoral ThesisCollection of Articles

Open Access

Beavers affect carbon biogeochemistry: both short-term and long-term processes are involved.

Nummi, P. J., Vehkaoja, M. C., Pumpanen, J. S. & Ojala, A. K., Oct 2018, In : Mammal Review. 48, 4, p. 298-311 14 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Belowground hydraulic conductance in a mature boreal Scots pine tree

Lintunen, A., Paljakka, T., Salmon, Y. & Hölttä, T., 2018, In : Acta Horticulturae. 2018, 1222, p. 103-108 6 p.

Research output: Contribution to journalArticleScientificpeer-review

Benthic fluxes of oxygen and inorganic nutrients in the archipelago of Gulf of Finland, Baltic Sea – Effects of sediment resuspension measured in situ

Niemistö, J., Kononets, M., Ekeroth, N., Tallberg, P., Tengberg, A. & Hall, P. O. J., 2018, In : Journal of Sea Research. 135, p. 95-106 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Between science and industry-applied yeast research

Korhola, M., Mar 2018, In : FEMS Yeast Research. 18, 2, 10 p., 008.

Research output: Contribution to journalEditorialScientificpeer-review

Between-year changes in community composition shape species' roles in an Arctic plant-pollinator network

Cirtwill, A. R., Roslin, T., Rasmussen, C., Olesen, J. M. & Stouffer, D. B., Aug 2018, In : Oikos. 127, 8, p. 1163-1176 14 p.

Research output: Contribution to journalArticleScientificpeer-review

Beyond structures of highly symmetric purified viral capsids by cryo-EM

Stass, R., Ilca, S. L. & Huiskonen, J. T., Oct 2018, In : Current Opinion in Structural Biology. 52, p. 25-31 7 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Binding of EphrinA5 to RET receptor tyrosine kinase: An in vitro study

Liu, Y., Kaljunen, H., Pavic, A., Saarenpää, T., Himanen, J. P., Nikolov, D. B. & Goldman, A., 11 Jun 2018, In : PLoS One. 13, 6, 15 p., 0198291.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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BIO-103 Eliöiden monimuotoisuus - kasvit, levät ja sienet: Omatoimista opiskelua tukeva Open Access -verkkomateriaali

Rikkinen, J. K., Apr 2018, Helsinki: Suomen Lajitietokeskus. (Pinkka - lajintuntemuksen oppimisympäristö)

Research output: Book/ReportBookScientific

BIO-503 Suomen kasvisto ja kasvillisuus: Omatoimista opiskelua tukeva Open Access -verkkomateriaali

Rikkinen, J. K., Apr 2018, Helsinki: Suomen Lajitietokeskus. (Pinkka - lajintuntemuksen oppimisympäristö)

Research output: Book/ReportBookScientific

Biocontrol Potential of Forest Tree Endophytes

Terhonen, E., Kovalchuk, A., Zarsav, A. & Asiegbu, F. O., 2018, Endophytes of Forest Trees . Pirttilä, A. M. & Frank, C. (eds.). Second Edition ed. Springer, Vol. 2. p. 283 – 318 35 p.

Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

Biodiversity trends are stronger in marine than terrestrial assemblages

Blowes, S., Supp, S., Antao, L. I. H., Bates, A. E., Bruelheide, H., Chase, J. M., Moyes, F., Magurran, A. E., McGill, B., Myers-Smith, I. H., Winter, M., Bjorkman, A., Bowler, D., Byrnes, J., Gonzalez, A., Hines, J., Isbell, F., Jones, H. P., Navarro, L., Thompson, P. & 3 othersVellend, M., Waldock, C. & Dornelas, M., 30 Oct 2018, In : bioRxiv : the preprint server for biology . 457424

Research output: Contribution to journalArticleScientific

Bioinformatics analysis of intron retention events associated with the minor spliceosome

Oghabian, A., 2018, Helsinki: Helsingin yliopisto.

Research output: ThesisDoctoral ThesisCollection of Articles

Open Access

Bioinspired Designs, Molecular Premise and Tools for Evaluating the Ecological Importance of Antimicrobial Peptides

Ongey, E. L., Pflugmacher, S. & Neubauer, P., 10 Jul 2018, In : Pharmaceuticals. 11, 3, 28 p., 68.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Biologian ja maantieteen aineenopettajakoulutus uudistuu Helsingin yliopistossa

Mutanen, J., Dec 2018, In : Natura. 55, 4, p. 10-12 3 p.

Research output: Contribution to journalArticleProfessional

BioTIME: A database of biodiversity time series for the Anthropocene

Dornelas, M., Antao, L. I. H., Moyes, F., Bates, A. E., Magurran, A. E. & Consortium, BIME., 2018, In : Global Ecology and Biogeography. 27, 7, p. 760-786 27 p.

Research output: Contribution to journalArticleScientificpeer-review

Black Queen Evolution and Trophic Interactions Determine Plasmid Survival after the Disruption of the Conjugation Network

Cairns, J., Koskinen, K., Penttinen, R., Patinen, T., Hartikainen, A., Jokela, R., Ruusulehto, L., Viitamäki, S., Mattila, S., Hiltunen, T. & Jalasvuori, M., 2 Oct 2018, In : mSystems. 3, 5, 14 p., e00104-18.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Blood concentrations of p,p′-DDE and PCBs in harriers breeding in Spain and Kazakhstan

Espín, S., Terraube, J., Arroyo, B., Camarero, P. R., Mateo, R., Limiñana, R., Vázquez-Pumariño, X., Pinilla, A., García, J. T. & Mougeot, F., May 2018, In : Science of the Total Environment. 624, p. 1287-1297

Research output: Contribution to journalArticleScientificpeer-review

Blue light advances bud burst in branches of three deciduous tree species under short-day conditions

Brelsford, C. & Robson, T. M., Aug 2018, In : Trees : Structure and Function. 32, 4, p. 1157–1164 8 p.

Research output: Contribution to journalArticleScientificpeer-review

BMP/Dpp signaling and epithelial morphogenesis in Drosophila development

Gui, J., 2018, Helsinki: Helsingin yliopisto.

Research output: ThesisDoctoral ThesisCollection of Articles

Open Access

Body mass index is negatively associated with telomere length: a collaborative cross-sectional meta-analysis of 87 observational studies

TELOMAAS Group, Sep 2018, In : American Journal of Clinical Nutrition. 108, 3, p. 453-475 23 p.

Research output: Contribution to journalArticleScientificpeer-review

Boreal bog plant communities along a water table gradient differ in their standing biomass but not their biomass production

Korrensalo, A., Kettunen, L., Laiho, R., Alekseychik, P., Vesala, T., Mammarella, I. & Tuittila, E-S., Mar 2018, In : Journal of Vegetation Science. 29, 2, p. 136-146 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access

Bracketing phenogenotypic limits of mammalian hybridization

Savriama, Y., Valtonen, M., Kammonen, J. I., Rastas, P., Smolander, O-P., Lyyski, A., Häkkinen, T. J., Corfe, I. J., Gerber, S., Salazar-Ciudad, I., Paulin, L., Holm, L., Löytynoja, A., Auvinen, P. & Jernvall, J., 28 Nov 2018, In : Royal Society Open Science. 5, 11, 12 p., 180903.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Breeding bird species diversity across gradients of land use from forest to agriculture in Europe

Koivula, M. J., Chamberlain, D. E., Fuller, R. J., Palmer, S. C. F., Bankovics, A., Bracken, F., Bolger, T., de Juana, E., Montadert, M., Neves, R., Rufino, R., Sallent, A., da Silva, L. L., Leitao, P. J., Steffen, M. & Watt, A. D., Aug 2018, In : Ecopgraphy. 41, 8, p. 1331-1344 14 p.

Research output: Contribution to journalArticleScientificpeer-review