Faculty of Biological and Environmental Sciences

  • Viikinkaari 9

    HELSINKI

    Finland

Publications 1966 2021

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Review Article
2019

Arvio Janne Lahti: Wars For Empire

Andersson, R-H., 2019, (Submitted) In : Historiallinen Aikakauskirja.

Research output: Contribution to journalReview ArticleScientificpeer-review

Forest Tree Microbiomes and Associated Fungal Endophytes: Functional Roles and Impact on Forest Health

Terhonen, E., Blumenstein, K., Kovalchuk, A. & Asiegbu, F. O., 9 Jan 2019, In : Forests. 10, 42, p. 1 33 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Half a century of research on membrane-containing bacteriophages: bringing new concepts to modern virology

Mäntynen, S., Sundberg, L-R., Oksanen, H. M. & Poranen, M. M., 2019, In : Viruses. 11, 1

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
2018

Antibiotic-Resistance Genes in Waste Water

Karkman, A. V., Thuy Do, T., Walsh, F. & Virta, M. P. J., 2018, In : Trends in Microbiology. 26, 3, p. 49-57

Research output: Contribution to journalReview ArticleScientificpeer-review

Antimicrobial resistance and the environment: assessment of advances, gaps and recommendations for agriculture, aquaculture and pharmaceutical manufacturing

Topp, E., Larsson, D. G. J., Miller, D. N., Van den Eede, C. & Virta, M. P. J., Mar 2018, In : FEMS Microbiology Ecology. 94, 3, 5 p., 185.

Research output: Contribution to journalReview ArticleScientificpeer-review

Arctic hydroclimate variability during the last 2000 years: current understanding and research challenges

Linderholm, H. W., Nicolle, M., Francus, P., Gajewski, K., Helama, S., Korhola, A., Solomina, O., Yu, Z., Zhang, P., D'Andrea, W. J., Debret, M., Divine, D. V., Gunnarson, B. E., Loader, N. J., Massei, N., Seftigen, K., Thomas, E. K., Werner, J., Andersson, S., Berntsson, A. & 4 othersLuoto, T. P., Nevalainen, L., Saarni, S. & Valiranta, M., 10 Apr 2018, In : Climate of the Past. 14, 4, p. 473-514 42 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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A review and meta-analysis of the effects of climate change on Holarctic mountain and upland bird populations

Scridel, D., Brambilla, M., Martin, K., Lehikoinen, A., Iemma, A., Matteo, A., Jahnig, S., Caprio, E., Bogliani, G., Pedrini, P., Rolando, A., Arlettaz, R. & Chamberlain, D., Jul 2018, In : Ibis. 160, 3, p. 489-515 27 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Assessing the impacts of seabed mineral extraction in the deep sea and coastal marine environments: Current methods and recommendations for environmental risk assessment

Kaikkonen, L., Venesjärvi, R., Nygård, H. & Kuikka, S., Oct 2018, In : Marine Pollution Bulletin. 135, p. 1183-1197 15 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Associations between glucocorticoids and sociality across a continuum of vertebrate social behavior

Raulo, A. & Dantzer, B., Aug 2018, In : Ecology and Evolution. 8, 15, p. 7697-7716 20 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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A Systems Approach to Study Immuno- and Neuro-Modulatory Properties of Antiviral Agents

Zusinaite, E., Ianevski, A., Niukkanen, D., Poranen, M. M., Bjoras, M., Afset, J. E., Tenson, T., Velagapudi, V., Merits, A. & Kainov, D. E., Aug 2018, In : Viruses. 10, 8, 13 p., 423.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Beavers affect carbon biogeochemistry: both short-term and long-term processes are involved.

Nummi, P. J., Vehkaoja, M. C., Pumpanen, J. S. & Ojala, A. K., Oct 2018, In : Mammal Review. 48, 4, p. 298-311 14 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Bioinspired Designs, Molecular Premise and Tools for Evaluating the Ecological Importance of Antimicrobial Peptides

Ongey, E. L., Pflugmacher, S. & Neubauer, P., 10 Jul 2018, In : Pharmaceuticals. 11, 3, 28 p., 68.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Coastal ecosystems services in the Bay of Bengal and efforts to improve their management

Mozumder, M. M. H. & Shamsuzzaman, M. M., 1 Nov 2018, In : Indian Journal of Marine Sciences. 47, 11, p. 2287 2295 p., http://nopr.niscair.res.in/handle/123456789/45294.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Critical knowledge gaps and research needs related to the environmental dimensions of antibiotic resistance

Larsson, D. G. J., Andremont, A., Bengtsson-Palme, J., Brandt, K. K., Husman, A. M. D. R., Fagerstedt, P., Fick, J., Flach, C-F., Gaze, W. H., Kuroda, M., Kvint, K., Laxminarayan, R., Manaia, C. M., Nielsen, K. M., Plant, L., Ploy, M-C., Segovia, C., Simonet, P., Smalla, K., Snape, J. & 6 othersTopp, E., van Hengel, A. J., Verner-Jeffreys, D. W., Virta, M. P. J., Wellington, E. M. & Wernersson, A-S., Aug 2018, In : Environment International. 117, p. 132-138 7 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Diversification of the forest industries: role of new wood-based products

Hurmekoski, E., Jonsson, R., Korhonen, J., Jänis, J., Mäkinen, M., Leskinen, P. & Hetemäki, L., Dec 2018, In : Canadian Journal of Forest Research. 48, 12, p. 1417-1432 16 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Hermosolujen synapsien muovautumismekanismit oppimisen, muistin ja aivojen rappeumasairauksien taustalla

Saarikangas, J. & Hotulainen, P., 2018, In : Duodecim. 134, 12, p. 1226-1234 9 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

ICOS eddy covariance flux-station site setup: a review

Rebmann, C., Aubinet, M., Schmid, H., Arriga, N., Aurela, M., Burba, G., Clement, R., De Ligne, A., Fratini, G., Gielen, B., Grace, J., Graf, A., Gross, P., Haapanala, S., Herbst, M., Hortnagl, L., Ibrom, A., Joly, L., Kljun, N., Kolle, O. & 20 othersKowalski, A., Lindroth, A., Loustau, D., Mammarella, I., Mauder, M., Merbold, L., Metzger, S., Molder, M., Montagnani, L., Papale, D., Pavelka, M., Peichl, M., Roland, M., Serrano-Ortiz, P., Siebicke, L., Steinbrecher, R., Tuovinen, J-P., Vesala, T., Wohlfahrt, G. & Franz, D., Dec 2018, In : International Agrophysics. 32, 4, p. 471-494 28 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Image processing for cryogenic transmission electron microscopy of symmetry-mismatched complexes

Huiskonen, J. T., 27 Apr 2018, In : Bioscience Reports. 38, 2, 13 p., 20170203.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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In search of Wakȟáŋ

Andersson, R-H., 2018, In : Great Plains Quarterly. 38, 2, p. 227-235 9 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Laminopatiat - harvinaisten sairauksien kasvava joukko

Virtanen, L., Gullmets, J., Heliö, T. & Taimen, P., 2018, In : Duodecim. 134, 16, p. 1567-1575 9 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Microalgal community structure and primary production in Arctic and Antarctic sea ice: A synthesis

van Leeuwe, M. A., Tedesco, L., Arrigo, K. R., Assmy, P., Campbell, K., Meiners, K. M., Rintala, J-M., Selz, V., Thomas, D. N. & Stefels, J., 11 Jan 2018, In : Elementa: Science of the Anthropocene. 6, 25 p., 4.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Multimodal Aposematic Signals and Their Emerging Role in Mate Attraction

Rojas, B., Burdfield-Steel, E., De Pasqual, C., Gordon, S., Hernandez, L., Mappes, J., Nokelainen, O., Ronka, K. & Lindstedt, C., 3 Jul 2018, In : Frontiers in ecology and evolution . 6, 24 p., 93.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Neurobiologiset ilmiöt nopean masennuslääkevasteen taustalla

Kohtala, S., Järventausta, K. & Rantamäki, T., 2018, In : Duodecim. 134, 19, p. 1905-1912 8 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Nordic research infrastructures for plant phenotyping

Alexandersson, E., Keinanen, M., Chawade, A. & Himanen, K., 2018, In : Agricultural and Food Science. 27, 1, p. 7-16 10 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Opportunities and challenges in metabarcoding approaches for helminth community identification in wild mammals

Aivelo, T. & Medlar, A., Apr 2018, In : Parasitology. 145, 5, p. 608-621 14 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Paikannimien kerrostumat maaseudulla ja kaupungissa nimistöntutkijan kohteina

Ainiala, T., 2018, In : Elore. 25, 1, 11 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access

Phloem differentiation: an integrative model for cell specification

Blob, B., Heo, J. & Helariutta, Y., Jan 2018, In : Journal of Plant Research. 131, 1, p. 31-36 6 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Plant vascular tissues – connecting tissue comes in all shapes

Hellmann, E., Ko, D., Ruonala, R. H. & Helariutta, Y. E., 7 Dec 2018, (Accepted/In press) In : Plants.

Research output: Contribution to journalReview ArticleScientificpeer-review

Reactive Oxygen Species, Photosynthesis, and Environment in the Regulation of Stomata

Ehonen, S., Yarmolinsky, D., Kollist, H. & Kangasjarvi, J., 24 Jan 2018, In : Antioxidants & Redox Signaling. 18 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Reactive Oxygen Species in Plant Signaling

Waszczak, C., Carmody, M. & Kangasjarvi, J., Apr 2018, In : Annual Review of Plant Biology. 69, p. 209-236 28 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Reactive oxygen species signaling and stomatal movement in plant responses to drought stress and pathogen attack

Qi, J., Song, C-P., Wang, B., Zhou, J., Kangasjarvi, J., Zhu, J-K. & Gong, Z., Sep 2018, In : Journal of Integrative Plant Biology. 60, 9, p. 805-826 22 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Reviews and syntheses: Carbonyl sulfide as a multi-scale tracer for carbon and water cycles

Whelan, M. E., Lennartz, S. T., Gimeno, T. E., Wehr, R., Wohlfahrt, G., Wang, Y., Kooijmans, L. M. J., Hilton, T. W., Belviso, S., Peylin, P., Commane, R., Sun, W., Chen, H., Kuai, L., Mammarella, I., Maseyk, K., Berkelhammer, M., Li, K-F., Yakir, D., Zumkehr, A. & 22 othersKatayama, Y., Ogee, J., Spielmann, F. M., Kitz, F., Rastogi, B., Kesselmeier, J., Marshall, J., Erkkilä, K-M., Wingate, L., Meredith, L. K., He, W., Bunk, R., Launois, T., Vesala, T., Schmidt, J. A., Fichot, C. G., Seibt, U., Saleska, S., Saltzman, E. S., Montzka, S. A., Berry, J. A. & Campbell, J. E., 18 Jun 2018, In : Biogeosciences. 15, 12, p. 3625-3657 33 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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RNA Interference as a Prospective Tool for the Control of Human Viral Infections

Levanova, A. & Poranen, M. M., 11 Sep 2018, In : Frontiers in Microbiology. 9, 9 p., 2151.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Roles for RAB24 in autophagy and disease

Ylä-Anttila, P. & Eskelinen, E-L., 4 Mar 2018, In : Small GTPases. 9, 1-2, p. 1-9

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Rust resistance in faba bean (Vicia faba L.): status and strategies for improvement

Ijaz, U., Adhikari, K. N., Stoddard, F. L. & Trethowan, R. M., Jan 2018, In : Australasian Plant Pathology. 47, 1, p. 71-81 11 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Safety considerations of plant polysaccharides for food use: a case study on phenolic-rich softwood galactoglucomannan extract

Pitkänen, L. M., Heinonen, M. & Mikkonen, K. S., 2018, In : Food & Function. 9, p. 1931-1943 13 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Spatiaalinen analytiikka pelinkehityksessä

Ijäs, T. & Muukkonen, P., Dec 2018, In : Terra. 130, 4, p. 189-196

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access

Sugar sensing by ChREBP/Mondo-Mlx - new insight into downstream regulatory networks and integration of nutrient-derived signals

Havula, E. & Hietakangas, V., Apr 2018, In : Current Opinion in Cell Biology. 51, p. 89-96 8 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Taidefestivaali ekologisella otteella

Toivanen, T. T., 1 Nov 2018, In : Tiede & edistys. 43, 4, p. 346-349 4 p.

Research output: Contribution to journalReview ArticleScientific

Taxonomy of prokaryotic viruses: 2017 update from the ICTV Bacterial and Archaeal Viruses Subcommittee

Adriaenssens, E. M., Wittmann, J., Kuhn, J. H., Turner, D., Sullivan, M. B., Dutilh, B. E., Jang, H. B., van Zyl, L. J., Klumpp, J., Lobocka, M., Moreno Switt, A. I., Rumnieks, J., Edwards, R. A., Uchiyama, J., Alfenas-Zerbini, P., Petty, N. K., Kropinski, A. M., Barylski, J., Gillis, A., Clokie, M. R. C. & 11 othersPrangishvili, D., Lavigne, R., Aziz, R. K., Duffy, S., Krupovic, M., Poranen, M. M., Knezevic, P., Enault, F., Tong, Y., Oksanen, H. M. & Brister, J. R., Apr 2018, In : Archives of Virology. 163, 4, p. 1125-1129 5 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

The Baltic Sea as a time machine for the future coastal ocean

Reusch, T. B. H., Dierking, J., Andersson, H. C., Bonsdorff, E., Carstensen, J., Casini, M., Czajkowski, M., Hasler, B., Hinsby, K., Hyytiainen, K., Johannesson, K., Jomaa, S., Jormalainen, V., Kuosa, H., Kurland, S., Laikre, L., MacKenzie, B. R., Margonski, P., Melzner, F., Oesterwind, D. & 7 othersOjaveer, H., Refsgaard, J. C., Sandstrom, A., Schwarz, G., Tonderski, K., Winder, M. & Zandersen, M., May 2018, In : Science Advances. 4, 5, 16 p., 8195.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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The current state of CO2 flux chamber studies in the Arctic tundra: A review

Virkkala, A-M., Virtanen, T., Lehtonen, A., Rinne, J. & Luoto, M., Apr 2018, In : Progress in Physical Geography. 42, 2, p. 162-184 23 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

The role of reactive oxygen species in the integration of temperature and light signals

Krasensky-Wrzaczek, J. & Kangasjärvi, J. S., 2018, In : Journal of Experimental Botany. 69, 14, p. 3347–3358

Research output: Contribution to journalReview ArticleScientificpeer-review

Tick-Borne Encephalitis Virus: A Structural View

Pulkkinen, L. I. A., Butcher, S. J. & Anastasina, M., 28 Jun 2018, In : Viruses. 10, 7, 20 p., 350.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Towards long-term standardised carbon and greenhouse gas observations for monitoring Europe's terrestrial ecosystems: a review

Franz, D., Acosta, M., Altimir, N., Arriga, N., Arrouays, D., Aubinet, M., Aurela, M., Ayres, E., Lopez-Ballesteros, A., Barbaste, M., Berveiller, D., Biraud, S., Boukir, H., Brown, T., Bruemmer, C., Buchmann, N., Burba, G., Carrara, A., Cescatti, A., Ceschia, E. & 103 othersClement, R., Cremonese, E., Crill, P., Darenova, E., Dengel, S., D'Odorico, P., Filippa, G., Fleck, S., Fratini, G., Fuss, R., Gielen, B., Gogo, S., Grace, J., Graf, A., Grelle, A., Gross, P., Gruenwald, T., Haapanala, S., Hehn, M., Heinesch, B., Heiskanen, J., Herbst, M., Herschlein, C., Hortnagl, L., Hufkens, K., Ibrom, A., Jolivet, C., Joly, L., Jones, M., Kiese, R., Klemedtsson, L., Kljun, N., Klumpp, K., Kolari, P., Kolle, O., Kowalski, A., Kutsch, W., Laurila, T., de Ligne, A., Linder, S., Lindroth, A., Lohila, A., Longdoz, B., Mammarella, I., Manise, T., Maranon Jimenez, S., Matteucci, G., Mauder, M., Meier, P., Merbold, L., Mereu, S., Metzger, S., Migliavacca, M., Molder, M., Montagnani, L., Moureaux, C., Nelson, D., Nemitz, E., Nicolini, G., Nilsson, M. B., Op de Beeck, M., Osborne, B., Lofvenius, M. O., Pavelka, M., Peichl, M., Peltola, O., Pihlatie, M., Pitacco, A., Pokorny, R., Pumpanen, J., Ratie, C., Rebmann, C., Roland, M., Sabbatini, S., Saby, N. P. A., Saunders, M., Schmid, H. P., Schrumpf, M., Sedlak, P., Serrano Ortiz, P., Siebicke, L., Sigut, L., Silvennoinen, H., Simioni, G., Skiba, U., Sonnentag, O., Soudani, K., Soule, P., Steinbrecher, R., Tallec, T., Thimonier, A., Tuittila, E-S., Tuovinen, J-P., Vestin, P., Vincent, G., Vincke, C., Vitale, D., Waldner, P., Weslien, P., Wingate, L., Wohlfahrt, G., Zahniser, M. & Vesala, T., Dec 2018, In : International Agrophysics. 32, 4, p. 439-455 22 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Transfer RNA modification and infection – implications for pathogenicity and host responses

Koh, C. S. & Sarin, L. P., Apr 2018, In : Biochimica et Biophysica Acta. Gene Regulatory Mechanisms. 1861, 4, p. 419-432

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Uncovering the hidden players in Lepidoptera biology: the heritable microbial endosymbionts

Duplouy, A. & Hornett, E. A., 24 Mar 2018, In : PeerJ Preprints. 6, e26768v1

Research output: Contribution to journalReview ArticleScientific

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Uncovering the hidden players in Lepidoptera biology: the heritable microbial endosymbionts

Duplouy, A. & Hornett, E. A., 8 May 2018, In : PeerJ. 6, e4629

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Unnatural hypoxic regimes

Jager, H. I., Novello, R., Dale, V., Villnäs, A. & Rose, K., 10 Sep 2018, In : Ecosphere. 9, 9, p. 1-19 19 p., 10.1002/ecs2.2408.

Research output: Contribution to journalReview ArticleScientificpeer-review

Open Access
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Vikara ko vinimaya: Exchange of Ideas

Moisala, P., 2018, In : Yearbook for Traditional Music. 50, p. 242-243 2 p.

Research output: Contribution to journalReview ArticleScientificpeer-review