Fungal Co-life, Omics and Ecophysiology Research Group

  • Viikinkaari 9, PO Box 56, Viikki Biocenter 1, Department of Microbiology

    FI-00014 University of Helsinki

    Finland

Publications 1989 2019

  • 21 Article
  • 9 Conference contribution
  • 1 Conference article
  • 1 Doctoral Thesis
2019

Genome description of Phlebia radiata 79 with comparative genomics analysis on lignocellulose decomposition machinery of phlebioid fungi

Mäkinen, M., Kuuskeri, J., Laine, P., Smolander, O-P., Kovalchuk, A., Zeng, Z., Asiegbu, F., Paulin, L., Auvinen, P. & Lundell, T., 28 May 2019, In : BMC Genomics. 20, 22 p., 430.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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2018

Lignocellulose bioconversion to ethanol by a fungal single-step consolidated method tested with waste substrates and co-culture experiments

Mattila, H. K., Kačar, D., Mali, T. L. E. & Lundell, T. K., 18 Oct 2018, In : AIMS Energy. 6, 5, p. 866-879 14 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Polyporales brown rot species Fomitopsis pinicola: enzyme activity profiles, oxalic acid production, and Fe3+-reducing metabolite secretion

Shah, F. H., Mali, T. L. E. & Lundell, T. K., Apr 2018, In : Applied and Environmental Microbiology. 84, 8, 14 p., UNSP e02662-17.

Research output: Contribution to journalArticleScientificpeer-review

Transcription of lignocellulose-decomposition associated genes, enzyme activities and production of ethanol upon bioconversion of waste substrate by Phlebia radiata

Mäkinen, M. A., Risulainen, N., Mattila, H. K. & Lundell, T. K., Jul 2018, In : Applied Microbiology and Biotechnology. 102, 13, p. 5657-5672 16 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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2017

Engineering towards catalytic use of fungal class-II peroxidases for dye-decolorizing and conversion of lignin model compounds

Lundell, T. K., Bentley, E., Hilden, S. K., Rytioja, J. T., Kuuskeri, J. T., Ufot, U. F., Nousiainen, P. A., Hofrichter, M., Wahlsten, M. P-V., Doyle, W. & Smith, A. T., 2017, In : Current Biotechnology. 6, 2, p. 116-117 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Interactions affect hyphal growth and enzyme profiles in combinations of coniferous wood-decaying fungi of Agaricomycetes

Mali, T., Kuuskeri, J., Shah, F. & Lundell, T. K., 27 Sep 2017, In : PLoS One. 12, 9, 21 p., e0185171.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Kokeellisen evoluution laboratoriokurssi Viikissä

Cairns, J., Hiltunen, T. J. & Virolainen, T. L. E., Mar 2017, In : Inocula : mikrobiologikillan julkaisu.. 2017, 1, p. 6-7 2 p.

Research output: Contribution to journalArticleProfessional

Time-scale dynamics of proteome and transcriptome of the white-rot fungus Phlebia radiata: growth on spruce wood and decay effect on lignocellulose

Kuuskeri, J., Häkkinen, M., Laine, P., Smolander, O-P., Tamene, F., Miettinen, S., Nousiainen, P., Kemell, M., Auvinen, P. & Lundell, T., 5 Sep 2016, In : Biotechnology for Biofuels. 9, 22 p., 192.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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2015
Open Access
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Respiration rate determinations suggest Heterobasidion parviporum subpopulations have potential to adapt to global warming

Müller, M., Hamberg, L., Kuuskeri, J. T., LaPorta, N., Pavlov, I. & Korhonen, K., 2015, In : Forest Pathology. 45, 6, p. 515-524 10 p.

Research output: Contribution to journalArticleScientificpeer-review

2014

Phenolic mediators boost manganese and versatile peroxidase catalyzed oxidation of lignocellulosic materials

Nousiainen, P. A., Kontro, J. H. S., Manner, M. H., Rytioja, J. T., Mäkelä, M. R., Maijala, P. M., Lundell, T. K., Hatakka, A. I. & Sipilä, A. J., 2014, Unknown host publication.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

2012

Phenolic mediators enhance the manganese peroxidase catalyzed oxidation of recalcitrant lignin model compounds

Nousiainen, P. A., Kontro, J. H. S., Manner, M. H., Mäkelä, M. R., Hilden, S. K., Maijala, P. M., Lundell, T. K., Hatakka, A. I. & Sipilä, A. J., 2012, OxiZymes 16.-19.9. 2012, proceedings book p. 123. Poster. Marseille, p. 123-123 1 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

2010

Laccases from the white rot fungi Physisporinus rivulosus and Phlebia radiata: molecular characterization of thermotolerant oxidoreductases and reactions with mediator compounds

Hilden, K., Lundell, T., Mäkelä, M., Rytioja, J., Nousiainen, P. A., Sipilä, J., Chernykh, A., Golovleva, L., Archer, D. & Hatakka, A., 2010, 1st Symposium on Biotechnology Applied to Lignocelluloses, Lignobiotech One. p. 77 1 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

Molecular characterisation of thermotolerant laccases from the biopulping fungus Physisporinus rivulosus

Hilden, K., Lundell, T., Mäkelä, M., Rytioja, J., Nousiainen, P. A., Sipilä, J., Archer, D., Chernykh, A., Golovleva, L. & Hatakka, A., 2010, Oxidative enzymes as sustainable industrial biocatalysts (OESIB). p. 127 1 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

Natural mediators in oxidoreductase-catalysed degradation of lignocellulosic materials: A study on lignin model compounds

Nousiainen, P. A., Rainio, A., Rytioja, J., Kontro, J., Hilden, K., Hatakka, A., Lundell, T. & Sipilä, J., 2010, 1st Symposium on Biotechnology Applied to Lignocelluloses, Lignobiotech One. p. 85 1 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

On the role of natural mediators in oxidoreductase catalysed degradation of lignocellulosic materials: A Study on lignin model compounds

Nousiainen, P. A., Rainio, A., Kontro, J., Rytioja, J., Rytioja, J., Uzan, E., Hatakka, A., Lundell, T., Lomascolo, A. & Sipilä, J., 2010, The 11th European Workshop on Lignosellulosics and Pulp 2010. p. 89-92 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

2003

Detection of acetylcholinesterase inhibitors in natural products by a TLC bioautographical method

Järvinen, P. P., Sundquist, V., Lundell, T. K., Mettälä, A. H., Galkin, S., Hatakka, A. I. & Vuorela, P. M., Jun 2003, In : European Journal of Pharmaceutical Sciences. 19, Supplement 1, p. S30-S30 1 p.

Research output: Contribution to journalConference articleScientific

2002

Manganese peroxidase - The key enzyme in lignin biodegradation and biopulping by white-rot fungi?

Hakala, T., Lundell, T., Hofrichter, M. & Maijala, P., 2002, In : Abstracts of papers of the American Chemical Society . 223, p. U123-U123 1 p.

Research output: Contribution to journalArticleScientific

Preface

Hatakka, A. I., Lundell, T. K. & Jeffries, T., 16 Apr 2002, Recent Advances in Lignin Biodegradation: Enzyme and Microbial Technology. Elsevier Academic Press, Vol. 30. p. 423-424 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

2001

Conversion of milled pine wood by manganese peroxidase from Phlebia radiata

Hofrichter, M., Lundell, T. & Hatakka, A., 2001, In : Applied and Environmental Microbiology. 67, p. 4588-4593 6 p.

Research output: Contribution to journalArticleScientificpeer-review

1996

Fungal pretreatment of non-woody plants for chemical pulping and papermaking

Hatakka, A. I., Mettälä, A. H., Vares, T., Kalsi, M., Lundell, T. K. & Paavilainen, L., 24 Mar 1996, ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY. Washington: American Chemical Society, Vol. 211. p. 203-CELL 2 p. (ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY; vol. 211, no. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

1995

The Manganese Binding Site of Manganese Peroxidase: Characterization of an Asp179Asn Site-Directed Mutant Protein

Kusters-van Someren, M., Kishi, K., Lundell, T. K. & Gold, M., Aug 1995, In : Biochemistry. 34, 33, p. 10620-10627 8 p.

Research output: Contribution to journalArticleScientificpeer-review

1994

The oxidation of veratryl alcohol, dimeric lignin models and lignin by lignin peroxidase - The redox cycle revisited.

Schoemaker, H. E., Lundell, T. K., Hatakka, A. I. & Piontek, K., 1994, In : FEMS Microbiology Reviews. 13, p. 321-332 12 p.

Research output: Contribution to journalArticleScientificpeer-review

1993

Production of multiple lignin peroxidases by the white-rot fungus Phlebia ochraceofulva

Vares, T., Lundell, T. K. & Hatakka, A. I., 1993, In : Enzyme and microbial technology. 15, 8, p. 664-669 6 p.

Research output: Contribution to journalArticleScientificpeer-review

1992

INFLUENCE OF LIGNIN-RELATED AROMATIC-COMPOUNDS ON THE PRODUCTION OF LIGNINOLYTIC ENZYMES BY PHLEBIA-RADIATA

ROGALSKI, J., LUNDELL, T., LEONOWICZ, A. & HATAKKA, A., 1992, Lignocellulosics: Science, Technology, Development and Use. Kennedy, J. F., Phillips, G. O. & Williams, P. A. (eds.). Chichester: Ellis Horwood, p. 55-60 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Novel heme-containing enzyme possibly involved in lignin degradation by the white-rot fungus Junghuhnia separabilima

Vares, T., Lundell, T. K. & Hatakka, A. I., 1992, In : FEMS Microbiology Letters. 99, 1, p. 53-58 6 p.

Research output: Contribution to journalArticleScientificpeer-review

1991

Demethylation and reduction of veratric acid by selected white-rot fungi

Leonowicz, A., Lundell, T. K., Rogalski, J. & Hatakka, A. I., 1991, In : Acta Microbiologica Polonica. 40, 3-4, p. 205-220 16 p.

Research output: Contribution to journalArticleScientificpeer-review

Influence of aromatic compounds on the production of ligninolytic enzymes in Phlebia radiata

Rogalski, J., Lundell, T. K., Leonowicz, A. & Hatakka, A. I., 1991, In : Phytochemistry. 30, 9, p. 2869-2872 4 p.

Research output: Contribution to journalArticleScientificpeer-review

1989

The potential of white-rot fungi and their enzymes in the treatment of lignocellulosic feed

Hatakka, A. I., Mohammadi, O. K. & Lundell, T. K., 1989, In : Food Biotechnology. 3, 1, p. 45-58 14 p.

Research output: Contribution to journalArticleScientificpeer-review