Publications 1978 2020

2017

Description and phylogenetic investigation of Pogonatum shevockii N.E.Bell & Hyvönen (Polytrichaceae), a new East Asian species with a unique leaf morphology

Bell, N. E., Hyvonen, J., Yao, K-Y. & Ma, W-Z., 2017, In : Journal of Bryology. 39, 3, p. 235-246 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Detecting early signs of heat and drought stress in Phoenix dactylifera (date palm)

Safronov, O., Kreuzwieser, J., Haberer, G., Alyousif, M. S., Schulze, W., Al-Harbi, N., Arab, L., Ache, P., Stempfl, T., Kruse, J., Mayer, K. X., Hedrich, R., Rennenberg, H., Salojarvi, J. & Kangasjarvi, J., 1 Jun 2017, In : PLoS One. 12, 6, 17 p., 0177883.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Early-career experts essential for planetary sustainability

Lim, M., Lynch, A. J., Fernandez-Llamazares, A., Balint, L., Basher, Z., Chan, I., Jaureguiberry, P., Mohamed, A. A. A., Mwampamba, T. H., Palomo, I., Pliscoff, P., Salimov, R. A., Samakov, A., Selomane, O., Shrestha, U. B. & Sidorovich, A. A., Dec 2017, In : Current Opinion in Environmental Sustainability. 29, p. 151-157 7 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

Early development of the threespine stickleback in relation to water pH

Glippa, O., Brutemark, A., Johnson, J., Spilling, K., Candolin, U. & Engström-Öst, J., 22 Dec 2017, In : Frontiers in Marine Science. 4, 427.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Ecological and genetic basis of metapopulation persistence of the Glanville fritillary butterfly in fragmented landscapes

Hanski, I., Schulz, T., Wong, S. C., Ahola, V., Ruokolainen, A. & Ojanen, S. P., 17 Feb 2017, In : Nature Communications. 8, 11 p., 14504.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Effects of temperature, salinity and composition of the dinoflagellate assemblage on the growth of Gambierdiscus carpenteri isolated from the Great Barrier Reef

Sparrow, L., Momigliano, P., Russ, G. R. & Heimann, K., May 2017, In : Harmful algae. 65, p. 52-60 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Emerging Roles and Landscape of Translating mRNAs in Plants

Sablok, G., Powell, J. J. & Kazan, K., 1 Sep 2017, In : Frontiers in plant science. 8, 9 p., 1443.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Environmental Causation of Turtle Scute Anomalies in ovo and in silico

Zimm, R., Bentley, B. P., Wyneken, J. & Moustakas-Verho, J. E., Dec 2017, In : Integrative and Comparative Biology. 57, 6, p. 1303-1311 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Environmental enrichment, sexual dimorphism, and brain size in sticklebacks

Toli, E. A., Noreikiene, K., De Faveri, J. & Merila, J., Mar 2017, In : Ecology and Evolution. 7, 6, p. 1691-1698 8 p.

Research output: Contribution to journalArticleScientificpeer-review

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Evidence of the migratory bat, Pipistrellus nathusii, aggregating to the coastlines in the Northern Baltic Sea

Ijas, A., Kahilainen, A., Vasko, V. V. & Lilley, T. M., Jun 2017, In : Acta Chiropterologica. 19, 1, p. 127-139 13 p.

Research output: Contribution to journalArticleScientificpeer-review

Evolutionary constraints shape caste-specific gene expression across 15 ant species

Morandin, C., Mikheyev, A. S., Pedersen, J. S. & Helanterä, H., May 2017, In : Evolution. 71, 5, p. 1273-1284 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Evolutionary contribution to coexistence of competitors in microbial food webs

Hiltunen, T., Kaitala, V., Laakso, J. & Becks, L., 2017, In : Proceedings of the Royal Society B. Biological Sciences. 284, 1864, 8 p., 20170415.

Research output: Contribution to journalArticleScientificpeer-review

Exploring Ultraviolet Photography by David Prutchi

Aphalo, P. J., 9 Oct 2017, In : UV4Plants Bulletin. 2017, 1, p. 71-73

Research output: Contribution to journalBook/Film/Article reviewScientific

Open Access
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Extraction and Curation of Gene Models for Plant Receptor Kinases for Phylogenetic Analysis

Vaattovaara, A. F. M., Salojärvi, J. T. & Wrzaczek, M. A., 2017, Plant Receptor Kinases : Methods and Protocols. Aalen, R. (ed.). New York: Springer, p. 79-91 79 p. (Methods in Molecular Biology; no. 1621).

Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

Extraordinarily rapid speciation in a marine fish

Momigliano, P., Jokinen, H., Fraimout, A., Florin, A-B., Norkko, A. & Merilä, J., 6 Jun 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 23, p. 6074-6079 6 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access

Feeding, survival, and reproduction of two populations of Eurytemora (Copepoda) exposed to local toxic cyanobacteria

Engström-Öst, J., Barrett, N., Brutemark, A., Vehmaa, A., Dwyer, A., Almén, A-K. & De Stasio, B. T., Dec 2017, In : Journal of Great Lakes Research. 43, 6, p. 1091-1100 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Fight or flight? – Flight increases immune gene expression but does not help to fight an infection

Woestmann, L., Kvist, J. A. & Saastamoinen, M. A. K., Mar 2017, In : Journal of Evolutionary Biology. 30, 3, p. 501-511 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Gaussian processs framework for temporal dependence and discrepancy functions in Ricker-type population growth models

Hartmann, M., Hosack, G. R., Hillary, R. M. & Vanhatalo, J. P., Sep 2017, In : Annals of Applied Statistics. 11, 3, p. 1375-1402 28 p.

Research output: Contribution to journalArticleScientificpeer-review

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Genetic structure and signatures of selection in grey reef sharks (Carcharhinus amblyrhynchos)

Momigliano, P., Harcourt, R., Robbins, W. D., Jaiteh, V., Mahardika, G. N., Sembiring, A. & Stow, A., Sep 2017, In : Heredity. 119, 3, p. 142-153 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access

Genome sequence of the model plant pathogen Pectobacterium carotovorum SCC1

Niemi, O., Laine, P., Koskinen, P., Pasanen, M., Pennanen, V., Harjunpaa, H., Nykyri, J., Holm, L., Paulin, L., Auvinen, P., Palva, E. T. & Pirhonen, M., 20 Dec 2017, In : Standards in Genomic Sciences. 12, 8 p., 87.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Genome sequencing and population genomic analyses provide insights into the adaptive landscape of silver birch

Salojärvi, J., Smolander, O-P., Nieminen, K., Rajaraman, S., Safronov, O., Safdari, P., Lamminmäki, A., Immanen, J., Lan, T., Tanskanen, J., Rastas, P., Amiryousefi, A., Jayaprakash, B., Kammonen, J. I., Hagqvist, R., Eswaran, G., Ahonen, V. H., Serra, J. A., Asiegbu, F. O., Barajas-Lopez, J. D. D. & 65 othersBlande, D., Blokhina, O., Blomster, T., Broholm, S., Brosche, M., Cui, F., Dardick, C., Ehonen, S. E., Elomaa, P., Escamez, S., Fagerstedt, K. V., Fujii, H., Gauthier, A., Gollan, P. J., Halimaa, P., Heino, P. I., Himanen, K., Hollender, C., Kangasjarvi, S., Kauppinen, L., Kelleher, C. T., Kontunen-Soppela, S., Koskinen, J. P., Kovalchuk, A., Karenlampi, S. O., Kärkönen, A. K., Lim, K-J., Leppälä, J., Macpherson, L., Mikola, J., Mouhu, K., Mähönen, A. P., Niinemets, U., Oksanen, E., Overmyer, K., Palva, E. T., Pazouki, L., Pennanen, V., Puhakainen, T., Poczai, P., Possen, B. J. H. M., Punkkinen, M., Rahikainen, M. M., Rousi, M., Ruonala, R., van der Schoot, C., Shapiguzov, A., Sierla, M., Sipilä, T. P., Sutela, S., Teeri, T. H., Tervahauta, A. I., Vaattovaara, A., Vahala, J., Vetchinnikova, L., Welling, A., Wrzaczek, M., Xu, E., Paulin, L. G., Schulman, A. H., Lascoux, M., Albert, V. A., Auvinen, P., Helariutta, Y. & Kangasjarvi, J., 8 May 2017, In : Nature Genetics. 49, 6, p. 904-912 12 p.

Research output: Contribution to journalArticleScientificpeer-review

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Genomic and phenomic screens for flower related RING type ubiquitin E3 ligases in Arabidopsis

Pavicic, M., Mouhu, K., Wang, F., Bilicka, M. M., Chovanček, E. & Himanen, K. I. H., 28 Mar 2017, In : Frontiers in plant science. 8, 17 p., 416.

Research output: Contribution to journalArticleScientificpeer-review

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Global biogeographic patterns in bipolar moss species

Biersma, E. M., Jackson, J. A., Hyvonen, J., Koskinen, S., Linse, K., Griffiths, H. & Convey, P., Jul 2017, In : Royal Society Open Science. 4, 7, 13 p., 170147.

Research output: Contribution to journalArticleScientificpeer-review

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H-1, C-13 and N-15 NMR chemical shift assignments of A-thaliana RCD1 RST

Tossavainen, H., Hellman, M., Vainonen, J. P., Kangasjarvi, J. & Permi, P., Oct 2017, In : Biomolecular NMR assignments. 11, 2, p. 207-210 4 p.

Research output: Contribution to journalArticleScientificpeer-review

HaploForge: a comprehensive pedigree drawing and haplotype visualization web application

Tekman, M., Medlar, A., Mozere, M., Kleta, R. & Stanescu, H., 15 Dec 2017, In : Bioinformatics. 33, 24, p. 3871-3877 7 p.

Research output: Contribution to journalArticleScientificpeer-review

Harnessing the Power of Genomics to Secure the Future of Seafood

Bernatchez, L., Wellenreuther, M., Araneda, C., Ashton, D. T., Barth, J. M. I., Beacham, T. D., Maes, G. E., Martinsohn, J. T., Miller, K. M., Naish, K. A., Ovenden, J. R., Primmer, C. R., Suk, H. Y., Therkildsen, N. O. & Withler, R. E., Sep 2017, In : Trends in Ecology & Evolution. 32, 9, p. 665-680 16 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

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Hemocyte-mediated phagocytosis differs between honey bee (Apis mellifera) worker castes

Hystad, E. M., Salmela, H., Amdam, G. V. & Münch, D., 6 Sep 2017, In : PLoS One. 12, 9, e0184108.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Heredity and Evolutionary Theory

Uller, T. & Helanterä, H. O., 1 Jan 2017, Challenging the Modern Synthesis: Adaptation, Development, and Inheritance. Huneman, P. & Walsh, D. (eds.). New York: Oxford University Press, p. 280-316 37 p.

Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

High rate of adaptive evolution in two widespread European pines

Grivet, D., Avia, K., Vaattovaara, A., Eckert, A. J., Neale, D. B., Savolainen, O. & Gonzalez-Martinez, S. C., Dec 2017, In : Molecular Ecology. 26, 24, p. 6857-6870 14 p.

Research output: Contribution to journalArticleScientificpeer-review

High-throughput sequencing of transposable element insertions suggests adaptive evolution of the invasive Asian tiger mosquito towards temperate environments

Goubert, C., Henri, H., Minard, G., Moro, C. V., Mavingui, P., Vieira, C. & Boulesteix, M., Aug 2017, In : Molecular Ecology. 26, 15, p. 3968-3981 14 p.

Research output: Contribution to journalArticleScientificpeer-review

Human ROBO1 regulates white matter structure in corpus callosum

Darki, F., Massinen, S., Salmela, E., Matsson, H., Peyrard-Janvid, M., Klingberg, T. & Kere, J., Mar 2017, In : Brain structure & function. 222, 2, p. 707-716 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Identification and analysis of mtDNA genomes attributed to Finns reveal long-stagnant demographic trends obscured in the total diversity

Oversti, S., Onkamo, P., Stoljarova, M., Budowle, B., Sajantila, A. & Palo, J. U., 21 Jul 2017, In : Scientific Reports. 7, 10 p., 6193.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Identification of sympatric cryptic species of Aedes albopictus subgroup in Vietnam: new perspectives in phylosymbiosis of insect vector

Minard, G., Van Tran Van, Tran, F. H., Melaun, C., Klimpel, S., Koch, L. K., Khanh Ly Huynh Kim, Trang Huynh Thi Thuy, Huu Tran Ngoc, Potier, P., Mavingui, P. & Moro, C. V., 2 Jun 2017, In : Parasites & vectors. 10, 14 p., 276.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Impacts of eutrophication and oil spills on the Gulf of Finland herring stock

Rahikainen, M. K., Hoviniemi, K-M., Mäntyniemi, S. H. P., Vanhatalo, J. P., Helle, S. I., Lehtiniemi, M., Pönni, J. & Kuikka, O. S., 2017, In : Canadian Journal of Fisheries and Aquatic Sciences. 74, 8, p. 1218-1232 15 p.

Research output: Contribution to journalArticleScientificpeer-review

Individual stress-resistance in the ant Formica exsecta

Stucki, D., 2017, University of Helsinki. 38 p.

Research output: ThesisDoctoral ThesisCollection of Articles

Open Access

Intrinsic incompatibilities evolving as a by-product of divergent ecological selection: Considering them in empirical studies on divergence with gene flow

Kulmuni, J. & Westram, A. M., Jun 2017, In : Molecular Ecology. 26, 12, p. 3093-3103 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Isolation of Guard-cell Enriched Tissue for RNA Extraction

Jalakas, P., Yarmolinsky, D., Kollist, H. & Brosche, M. J., 2017, In : Bio-Protocol. 7, 15

Research output: Contribution to journalArticleScientificpeer-review

Kasvien talvi -verkkosivusto

Saarinen, T. P. & Åström, H. M., 15 Nov 2017

Research output: Non-textual formWeb publication/siteProfessional

Kulkeutuuko kalkki maassa?

Fagerstedt, K. V., 2017, In : Viherpiha. 2017, 4, p. 86 1 p.

Research output: Contribution to journalArticleGeneral public

LarsOlof Björn: UV4Plants Association’s first honorary member

Aphalo, P. J., 4 Mar 2017, In : UV4Plants Bulletin. 2016, 2, p. 17-28

Research output: Contribution to journalArticleScientific

Open Access
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Laser capture microdissection protocol for xylem tissues of woody plants

Blokhina, O. B., Valerio, C., Sokolowska, K., Zhao, L., Kärkönen, A. K., Niittylä, T. & Fagerstedt, K. V., 4 Jan 2017, In : Frontiers in plant science. 2017, 27 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Learn R ...as you learnt your mother tongue

Aphalo, P. J., 2017, Leanpub. 350 p.

Research output: Book/ReportBookProfessional

Maternal effects in vulnerability to eye-parasites and correlations between behavior and parasitism in juvenile Arctic charr

Kortet, R., Lautala, T., Kekalainen, J., Taskinen, J. & Hirvonen, H., Nov 2017, In : Ecology and Evolution. 7, 21, p. 8780-8787 8 p.

Research output: Contribution to journalArticleScientificpeer-review

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Mating signals and habitat deterioration

Candolin, U., 4 Mar 2017, Reference Module in Life Sciences. Osmanaj, B. & Escalante Santos, L. (eds.). Oxford: Elsevier Scientific Publ. Co

Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

Miksi keltakukkaisissa kasveissa on vain vähän värivariaatioita?

Fagerstedt, K. V., 2017, In : Viherpiha. 2017, 3, p. 86 1 p.

Research output: Contribution to journalArticleGeneral public

Mitä geenit kertovat suomalaisten alkuperästä?

Onkamo, P. A., 10 Jan 2017, Kaikki vapaudesta. Enqvist, K., Hetemäki, I. & Tiilikainen, T. (eds.). Helsinki: Gaudeamus, p. 197-211 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapterScientific

Miten korkeaksi sademetsän puut kasvavat? Lasten tiedekysymykset

Fagerstedt, K. V., 13 Jan 2017, In : Helsingin Sanomat. p. B11 1 p.

Research output: Contribution to journalArticleGeneral public

Modeling the spatial distribution of larval fish abundance provides essential information for management

Kallasvuo, M., Vanhatalo, J. & Veneranta, L., May 2017, In : Canadian Journal of Fisheries and Aquatic Sciences. 74, 5, p. 636-649 14 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Non-invasive genetic monitoring involving citizen science enables reconstruction of current pack dynamics in a re-establishing wolf population

Granroth-Wilding, H., Primmer, C., Lindqvist, M., Poutanen, J., Thalmann, O., Aspi, J., Harmoinen, J., Kojola, I. & Laaksonen, T., 19 Dec 2017, In : BMC Ecology. 17, 44, 15 p., 44.

Research output: Contribution to journalArticleScientificpeer-review

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Nonsense variant in COL7A1 causes recessive dystrophic epidermolysis bullosa in Central Asian Shepherd dogs

Niskanen, J., Dillard, K., Arumilli, M., Salmela, E., Anttila, M., Lohi, H. & Hytonen, M. K., 11 May 2017, In : PLoS One. 12, 5, 10 p., 0177527.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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