Publications 1978 2020

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2019

A comprehensive evaluation of predictive performance of 33 species distribution models at species and community levels

Norberg, A., Abrego Antia, N., Blanchet, F. G., Adler, F. R., Anderson, B. J., Anttila, J., Araújo, M. B., Dallas, T. A., Dunson, D., Elith, J., Foster, S., Fox, R., Franklin, J., Godsoe, W., Guisan, A., O'Hara, B., Hill, N. A., Holt, R. D., Hui, F. K. C., Husby, M. & 15 othersKålås, J. A., Lehikoinen, A., Luoto, M., Mod, H. K., Newell, G., Renner, I., Roslin, T. V., Soininen, J., Thuiller, W., Vanhatalo, J. P., Warton, D., White, M., Zimmermann, N. E., Gravel, D. & Ovaskainen, O. T., Aug 2019, In : Ecological Monographs. 89, 3, 24 p., 01370.

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Adaptive responses of animals to climate change are most likely insufficient

Radchuk, V., Reed, T., Teplitsky, C., van de Pol, M., Charmantier, A., Hassall, C., Adamik, P., Adriaensen, F., Ahola, M. P., Arcese, P., Miguel Aviles, J., Balbontin, J., Berg, K. S., Borras, A., Burthe, S., Clobert, J., Dehnhard, N., de Lope, F., Dhondt, A. A., Dingemanse, N. J. & 45 othersDoi, H., Eeva, T., Fickel, J., Filella, I., Fossoy, F., Goodenough, A. E., Hall, S. J. G., Hansson, B., Harris, M., Hasselquist, D., Hickler, T., Joshi, J., Kharouba, H., Gabriel Martinez, J., Mihoub, J-B., Mills, J. A., Molina-Morales, M., Moksnes, A., Ozgul, A., Parejo, D., Pilard, P., Poisbleau, M., Rousset, F., Roedel, M-O., Scott, D., Carlos Senar, J., Stefanescu, C., Stokke, B. G., Kusano, T., Tarka, M., Tarwater, C. E., Thonicke, K., Thorley, J., Wilting, A., Tryjanowski, P., Merilä, J., Sheldon, B. C., Moller, A. P., Matthysen, E., Janzen, F., Dobson, F. S., Visser, M. E., Beissinger, S. R., Courtiol, A. & Kramer-Schadt, S., 23 Jul 2019, In : Nature Communications. 10, 14 p., 3109.

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Additive multivariate Gaussian processes for joint species distribution modeling with heterogeneous data

Vanhatalo, J. P., Hartmann, M. & Veneranta, L., 2019, In : Bayesian analysis.

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A Gaussian process model and Bayesian variable selection for mapping function-valued quantitative traits with incomplete phenotype data

Vanhatalo, J., Li, Z. & Sillanpää, M., 1 Oct 2019, In : Bioinformatics. 35, 19, p. 3684–3692 9 p.

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Alate gyne of the ant Dolichoderus quadripunctatus (L.) (Hymenoptera, Formicidae) follows foraging trail to aphids

Czechowski, W., Trigos-Peral, G., Maak, I. & Vepsäläinen, K., 30 Aug 2019, In : Journal of Hymenoptera Research. 71, p. 241-248 8 p.

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A migration-associated supergene reveals loss of biocomplexity in Atlantic cod

Kess, T., Bentzen, P., Lehnert, S. J., Sylvester, E. V. A., Lien, S., Kent, M. P., Sinclair-Waters, M., Morris, C. J., Regular, P., Fairweather, R. & Bradbury, I. R., 26 Jun 2019, In : Science Advances. 5, 6, 8 p., 2461.

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A miniature world in decline: European Red List of Mosses, Liverworts and Hornworts

Enroth, J., 2019, (Accepted/In press) In : The IUCN Red List of Threatened Species. 68 p.

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Analysis of phenotypic- and Estimated Breeding Values (EBV) to dissect the genetic architecture of complex traits in a Scots pine three-generation pedigree design

Calleja-Rodriguez, A., Li, Z., Hallingbäck, H. R., Sillanpää, M. J., Wu, H. X., Abrahamsson, S. & Garcia-Gil, M. R., 7 Feb 2019, In : Journal of Theoretical Biology. 462, p. 283-292 10 p.

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An annotated checklist of the bryophytes of Taita Hills region, Kenya

Enroth, J., Pocs, T., He, X., Nyqvist, P., Stam, Å. C. S., Malombe, I. & Rikkinen, J. K., 1 Jul 2019, In : Acta Musei Silesiae. Scientiae Naturales. 68, 1-2, p. 53–66 14 p.

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An AP2/ERF transcription factor ERF139 coordinates xylem cell expansion and secondary cell wall deposition

Wessels, B., Seyfferth, C., Escamez, S., Vain, T., Antos, K., Vahala, J., Delhomme, N., Kangasjärvi, J., Eder, M., Felten, J. & Tuominen, H., 24 May 2019, In : New Phytologist. 15 p.

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An ecosystem-wide reproductive failure with more snow in the Arctic

Schmidt, N. M., Reneerkens, J., Christensen, J. H., Olesen, M. & Roslin, T., 15 Oct 2019, In : PLoS Biology. 17, 10, e3000392.

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A phylogenomic perspective on diversity, hybridization and evolutionary affinities in the stickleback genus Pungitius

Guo, B., Fang, B., Shikano, T., Momigliano, P., Wang, C., Kravchenko, A. & Merilä, J., 2 Sep 2019, In : Molecular Ecology. 28, 17, p. 4046-4064 19 p.

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Arabidopsis mutant dnd2 exhibits increased auxin and abscisic acid content and reduced stomatal conductance

Kale, L., Nakurte, I., Jalakas, P., Kunga-Jegere, L., Brosche, M. & Rostoks, N., Jul 2019, In : Plant Physiology and Biochemistry. 140, p. 18-26 9 p.

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Arabidopsis RCD1 coordinates chloroplast and mitochondrial functions through interaction with ANAC transcription factors

Shapiguzov, A., Vainonen, J., Hunter, K. A., Tossavainen, H. P. M., Tiwari, A., Järvi, S., Hellman, M. H., Aarabi, F., Alseekh, S., Wybouw, B., Van Der Kelen, K., Nikkanen, L., Krasensky-Wrzaczek, J., Sipari, N. H., Keinänen, M., Tyystjaervi, E., Rintamäki, E., De Rybel, B., Salojärvi, J. T., Van Breusegem, F. & 6 othersFernie, A. R., Brosche, M. J., Permi, P. E. I., Aro, E-M., Wrzaczek, M. A. & Kangasjärvi, J. S., 15 Feb 2019, In : eLife. 8, 35 p., e43284.

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Assessing changes in arthropod predator-prey interactions through DNA-based gut content analysis-variable environment, stable diet

Eitzinger, B., Abrego, N., Gravel, D., Huotari, T., Vesterinen, E. J. & Roslin, T., Jan 2019, In : Molecular Ecology. 28, 2, p. 266-280 15 p.

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Avian ecological epigenetics: pitfalls and promises

Sepers, B., van den Heuvel, K., Lindner, M., Viitaniemi, H., Husby, A. & van Oers, K., 10 Jul 2019, In : Journal of Ornithology.

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Bats as potential suppressors of multiple agricultural pests: A case study from Madagascar

Kemp, J., López-Baucells, A., Rocha, R., Wangensteen, O. S., Andriatafika, Z. E., Nair, A. & Cabeza, M., 2019, In : Agriculture, Ecosystems & Environment.

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Bayesian model based spatio-temporal sampling designs and partially observed log Gaussian Cox process

Liu, J. & Vanhatalo, J., 9 Oct 2019, (Accepted/In press) In : Spatial statistics.

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Beyond rest and quiescence (endo‐ and ecodormancy): a novel model for quantifying plant‐environment interaction in bud dormancy release

Lundell, R., Hänninen, H., Saarinen, T., Åström, H. & Zhang, R., 31 Aug 2019, (Accepted/In press) In : Plant, Cell and Environment.

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Bioregions in marine environments: Combining Biological and Environmental Data for Management and Scientific Understanding

Woolley, S., Bax, N., Currie, J., Dunn, D., Hansen, C., Hill, N., O'Hara, T., Ovaskainen, O., Sayre, R., Vanhatalo, J. & Dunstan, P., 3 Oct 2019, (Accepted/In press) In : BioScience.

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Calibrating expert assessments using hierarchical Gaussian process models

Perälä, T., Vanhatalo, J. & Chrysafi, A., 2019, (Accepted/In press) In : Bayesian analysis.

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Caspary’s fungi from Baltic amber: historic specimens and new evidence

Kettunen, E. J., Sadowski, E-M., Seyfullah, L., Dörfelt, H., Rikkinen, J. & Schmidt, A., Aug 2019, In : Papers in Palaeontology. 5, 3, p. 365-389 25 p.

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Changes in gene DNA methylation and expression networks accompany caste specialization and age-related physiological changes in a social insect

Morandin, C., Brendel, V. P., Sundstrom, L., Helantera, H. & Mikheyev, A. S., Apr 2019, In : Molecular Ecology. 28, 8, p. 1975-1993 19 p.

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Changes in leaf functional traits of rainforest canopy trees associated with an El Nino event in Borneo

Nunes, M. H., Both, S., Bongalov, B., Brelsford, C., Khoury, S., Burslem, D. F. R. P., Philipson, C., Majalap, N., Riutta, T., Coomes, D. A. & Cutler, M. E. J., Aug 2019, In : Environmental Research Letters. 14, 8, 13 p., 085005.

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Chemical profiles of birch and alder bark by ambient mass spectrometry

Räsänen, R-M., Hieta, J-P., Immanen, J., Nieminen, K., Haavikko, R., Yli-Kauhaluoma, J. & Kauppila, T. J., 24 Sep 2019, (Accepted/In press) In : Analytical and Bioanalytical Chemistry.

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Chlorophyll fluorescence imaging for monitoring effects of Heterobasidion parviporum small secreted protein induced cell death and in planta defense gene expression.

Wen, Z., Raffaello, T., Zeng, Z., Pavicic Venegas, M. V. & Asiegbu, F. O., 22 May 2019, In : Fungal Genetics and Biology. 126, p. 37-49 13 p.

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Co-inheritance of sea age at maturity and iteroparity in the Atlantic salmon vgll3 genomic region

Aykanat, T., Ozerov, M., Vähä, J-P., Orell, P., Niemelä, E., Erkinaro, J. & Primmer, C. R., Apr 2019, In : Journal of Evolutionary Biology. 32, 4, p. 343-355 13 p.

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Comparing future shifts in tree species distributions across Europe projected by statistical and dynamic process-based models

Takolander, A., Hickler, T., Meller, L. & Cabeza, M., Jan 2019, In : Regional Environmental Change. 19, 1, p. 251-266 16 p.

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Complete mitochondrial genome sequence of the Himalayan Griffon, Gyps himalayensis (Accipitriformes: Accipitridae): Sequence, structure, and phylogenetic analyses

Jiang, L., Peng, L., Tang, M., You, Z., Zhang, M., West, A., Ruan, Q., Chen, W. & Merilä, J., 9 Jul 2019, In : Ecology and Evolution. 9, 15, p. 8813-8828 16 p.

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Congruent patterns of functional diversity in saproxylic beetles and fungi across European beech forests

Hagge, J., Abrego, N., Baessler, C., Bouget, C., Brin, A., Brustel, H., Christensen, M., Gossner, M. M., Heilmann-Clausen, J., Horak, A., Gruppe, A., Isacsson, G., Koehler, F., Lachat, T., Larrieu, L., Schlaghamersky, J., Thorn, S., Zapponi, L. & Mueller, J., May 2019, In : Journal of Biogeography. 46, 5, p. 1054-1065 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Contrasting latitudinal gradients of body size in helminth parasites and their hosts

Dallas, T., Gehman, A-L. M., Aguirre, A. A., Budischak, S. A., Drake, J. M., Farrell, M. J., Ghai, R., Huang, S. & Morales-Castilla, I., Jun 2019, In : Global Ecology and Biogeography. 28, 6, p. 804-813 10 p.

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CRK2 Enhances Salt Tolerance by Regulating Callose Deposition in Connection with PLDα1

Hunter, K., Kimura, S., Rokka, A., Huy Cuong Tran, Toyota, M., Kukkonen, J. P. & Wrzaczek, M., Aug 2019, In : Plant Physiology. 180, 4, p. 2004-2021 18 p.

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Cryptic temporal changes in stock composition explain the decline of a flounder (Platichthys spp.) assemblage

Momigliano, P., Jokinen, H., Calboli, F., Aro, E. & Merilä, J., Mar 2019, In : Evolutionary Applications. 12, 3, p. 549-559 11 p.

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Defences against brood parasites from a social immunity perspective

Cotter, S. C., Pincheira-Donoso, D. & Thorogood, R., Feb 2019, In : Philosophical Transactions of the Royal Society. Biological Sciences. 374, 1769, 12 p., 20180207.

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Dehydroabietylamine-Based Cellulose Nanofibril Films: A New Class of Sustainable Biomaterials for Highly Efficient, Broad-Spectrum Antimicrobial Effects

Hassan, G. A. M. S., Forsman, N., Wan, X., Keurulainen, L., Bimbo, L. M., Johansson, L-S., Sipari, N., Yli-Kauhaluoma, J. T., Zimmermann, R., Stehl, S., Werner, C., Saris, P. E. J., Österberg, M. & Moreira, V. M., 4 Mar 2019, In : ACS Sustainable Chemistry & Engineering. 7, 5, p. 5002-5009 8 p.

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Developmental stage-dependent response and preference for host plant quality in an insect herbivore

Salgado, A. L. & Saastamoinen, M., Apr 2019, In : Animal Behaviour. 150, p. 27-38 12 p.

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Dietary transitions among three contemporary hunter-gatherers across the tropics

Reyes-Garcia, V., Powell, B., Diaz-Reviriego, I., Fernandez-Llamazares, A., Gallois, S. & Gueze, M., Feb 2019, In : Food Security: The Science, Sociology and Economics of Food Production and Access to Food. 11, 1, p. 109-122 14 p.

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Different activation of immune-related genes in honey bee nurses and foragers (Apis mellifera)

Byhro, E. M. H., Salmela, H., Vitlic, A., Wang, Y., Munch, D. & Amdam, G., Aug 2019, In : Apidologie. 50, 4, p. 463-471 9 p.

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Differential regulation of auxin and cytokinin during the secondary vascular tissue regeneration in Populus trees

Chen, J-J., Wang, L-Y., Immanen, J., Nieminen, K., Spicer, R., Helariutta, Y., Zhang, J. & He, X-Q., Oct 2019, In : New Phytologist. 224, 1, p. 188-201 14 p.

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Diff isomiRs: Large-scale detection of differential isomiRs for understanding non-coding regulated stress omics in plants

Yang, K., Wen, X., Mudunuri, S., Varma, G. P. S. & Sablok, G., 5 Feb 2019, In : Scientific Reports. 9, 12 p., 1406.

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Diverse and variable virus communities in wild plant populations revealed by metagenomic tools

Susi, H., Filloux, D., Frilander, M. J., Roumagnac, P. & Laine, A-L., 11 Jan 2019, In : PeerJ. 7, 24 p., 6140.

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DOF2.1 Controls Cytokinin-Dependent Vascular Cell Proliferation Downstream of TMO5/LHW

Smet, W., Sevilem, I., de Luis Balaguer, MA., Wybouw, B., Mor, E., Miyashima, S., Blob, B., Roszak, P., Jacobs, TB., Boekschoten, M., Hooiveld, G., Sozzani, R., Helariutta, Y. E. & De Rybel, B., 4 Feb 2019, In : Current Biology. 29, 3, p. 520-+ 16 p.

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EcoMem: An R package for quantifying ecological memory

Itter, M. S., Vanhatalo, J. & Finley, A. O., Sep 2019, In : Environmental Modelling & Software. 119, p. 305-308 4 p.

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Effect of water deficit stress on seedling biomass and physio-chemical characteristics in different species of wheat possessing the D genome.

Pour-Aboughadareh, A., Omidi, M., Naghavi, M. R., Etminan, A., Mehrabi, A. A., Poczai, P. & Bayat, H., Sep 2019, In : Agronomy. 9, 9, 20 p., 522.

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Effect of wet storage conditions on potato tuber transcriptome, phytohormones and growth

Peivastegan, B., Hadizadeh, I., Nykyri, J., Nielsen, K. L., Somervuo, P., Sipari, N., Tran, C. & Pirhonen, M., 17 Jun 2019, In : BMC Plant Biology. 19, 18 p., 262.

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ELIMÄKI locus is required for mechanosensing and proprioception in birch trees

Helariutta, Y., 2019, (Submitted) In : Nature plants.

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Ethnobiology Through Song

Fernandez-Llamazares, A. & Lepofsky, D., Sep 2019, In : Journal of Ethnobiology. 39, 3, p. 337-353 17 p.

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Evaluating responses to temperature during pre-metamorphosis and carry-over effects at post-metamorphosis in the wood tiger moth (Arctia plantaginis)

A., G. J., Dhaygude, K., Behnaz, G., Kaisa, S., Janne, V. & Johanna, M., 14 Oct 2019, In : Philosophical Transactions of the Royal Society. Biological Sciences. 374, 1783

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