Publications

2021

Extraction and Purification of DNA from Complicated Biological Samples

Kalendar, R., Boronnikova, S. & Seppänen, M. M., 2021, Molecular Plant Taxonomy: Methods and Protocols. Besse, P. (ed.). 2 ed. Springer, Vol. 2222. (Methods in Molecular Biology; vol. 2222).

Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

2020

Accounting for environmental variation in co-occurrence modelling reveals the importance of positive interactions in root-associated fungal communities

Abrego, N., Roslin, T., Huotari, T., Tack, A. J. M., Lindahl, B. D., Tikhonov, G., Somervuo, P., Schmidt, N. M. & Ovaskainen, O., 4 Jul 2020, In : Molecular Ecology. 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access

Adding Sphagnum to peat growing medium improves plant performance under water restricting conditions

Kamarainen, A., Jokinen, K. & Linden, L., 2020, In : Mires and Peat. 26, 17 p., 13.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Agroekologinen symbioosi

Translated title of the contribution: Agroecological symbiosisHelenius, J. & Koppelmäki, K., 2020, Hiiliopas: katsaus maaperän hiileen ja hiiliviljelyn perusteisiin. Heinonsalo, J. (ed.). Kaarina: Carbon Action & Baltic Sea Action Group, p. 38-41

Research output: Chapter in Book/Report/Conference proceedingChapterProfessional

Open Access
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A novel haplotype of 'Candidatus Liberibacter solanacearum' found in Apiaceae and Polygonaceae family plants

Haapalainen, M., Latvala, S., Wickstrom, A., Wang, J., Pirhonen, M. & Nissinen, A. I., Jan 2020, In : European Journal of Plant Pathology. 156, 2, p. 413-423 11 p.

Research output: Contribution to journalArticleScientificpeer-review

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Apoplastic Hydrogen Peroxide in the Growth Zone of the Maize Primary Root. Increased Levels Differentially Modulate Root Elongation under Well-Watered and Water-Stressed Conditions

Voothuluru, P., Mäkelä, P., Zhu, J., Yamaguchi, M., Oliver, M. J., Simmonds, J. & Sharp, R., 21 Apr 2020, In : Frontiers in plant science. 11, p. 1-18 18 p., 392.

Research output: Contribution to journalArticleScientificpeer-review

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AquaCrop simulated response of sorghum biomass and grain yield to biochar amendment in South Sudan

Starr, M., Deng, B. & Helenius, J., Jan 2020, In : Agronomy. 10, 1, 14 p., 67.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Are males and females of Populus cathayana differentially sensitive to Cd stress?

Liu, M., Liu, X., Kang, J., Korpelainen, H. & Li, C., 5 Jul 2020, In : Journal of Hazardous Materials. 393, 13 p., 122411.

Research output: Contribution to journalArticleScientificpeer-review

Development of FRET-based high-throughput screening for viral RNase III inhibitors

Wang, L., Saarela, J., Poque, S. & Valkonen, J. P. T., Jul 2020, In : Molecular Plant Pathology. 21, 7, p. 961-974 14 p.

Research output: Contribution to journalArticleScientificpeer-review

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European Court of Justice delivers no justice to Europe on genome-edited crops

Schulman, A. H., Oksman-Caldentey, K-M. & Teeri, T. H., Jan 2020, In : Plant biotechnology journal. 18, 1, p. 8-10 3 p.

Research output: Contribution to journalLetterScientificpeer-review

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Evaluation of yield, yield stability, and yield–protein relationship in 17 commercial faba bean cultivars

Skovbjerg, C. K., Knudsen, J. N., Füchtbauer, W., Stougaard, J., Stoddard, F. L., Janss, L. & Andersen, S. U., 23 Apr 2020, In : Legume Science. n/a, n/a, p. e39

Research output: Contribution to journalArticleScientificpeer-review

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Fragmented tropical forests lose mutualistic plant–animal interactions

Marjakangas, E-L., Abrego, N., Grøtan, V., de Lima, R. A. F., Bello, C., Bovendorp, R. S., Culot, L., Hasui, É., Lima, F., Muylaert, R. L., Niebuhr, B. B., Oliveira, A. A., Pereira, L. A., Prado, P. I., Stevens, R. D., Vancine, M. H., Ribeiro, M. C., Galetti, M. & Ovaskainen, O., Feb 2020, In : Diversity and Distributions. 26, 2, p. 154-168 15 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Glysiinibetaiinilla hyviä tuloksia salaatilla

Jokinen, K., Salovaara, A-K. J., Edelmann, M. & Mäkelä, P., Jan 2020, In : Puutarha & kauppa. 2020, 2, p. 9 1 p.

Research output: Contribution to journalArticleProfessional

Growth Response of Cassava to Deficit Irrigation and Potassium Fertigation During the Early Growth Phase

Wasonga, D., Kleemola, J., Alakukku, L. & Mäkelä, P., Mar 2020, In : Agronomy. 10, 3, 14 p., 321.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Habitat fragmentation and species diversity in competitive communities

Rybicki, J., Abrego, N. & Ovaskainen, O., Mar 2020, In : Ecology Letters. 23, 3, p. 506-517 12 p.

Research output: Contribution to journalArticleScientificpeer-review

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Hiiliopas: Katsaus maaperän hiileen ja hiiliviljelyn perusteisiin

Translated title of the contribution: Carbon guide: An outlook on carbon in soil and on carbon cultivationHeinonsalo, J. (ed.), Heimsch, L., Helenius, J., Huusko, M. K., Höijer, L., Joona, J. M., Kanerva, S., Karhu, K., Kekkonen, H. R., Koppelmäki, K., Kulmala, L., Lötjönen, S., Mattila, T. J., Ollikainen, M., Peltokangas, K., Regina, K., Soinne, H., Wikström, U. & Viskari, T., Jan 2020, 1 ed. Kaarina: Carbon Action & Baltic Sea Action Group. 60 p.

Research output: Book/ReportBookProfessional

Open Access
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Internal phosphorus loading in a small shallow Lake: Response after sediment removal

Kiani, M., Tammeorg, P., Niemistö, J., Simojoki, A. & Tammeorg, O., 10 Jul 2020, In : Science of the Total Environment. 725, 11 p., 138279.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Joint species distribution modelling with the r-package Hmsc

Tikhonov, G., Opedal, O. H., Abrego, N., Lehikoinen, A., de Jonge, M. M. J., Oksanen, J. & Ovaskainen, O., 1 Mar 2020, In : Methods in Ecology and Evolution. 11, 3, p. 442-447 6 p.

Research output: Contribution to journalArticleScientificpeer-review

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Kasvutunnelista kotimaista puutarhakarpaloa

Palonen, P. & Simovaara, P. S., 15 May 2020, In : Puutarha & kauppa. 2020, 9, p. 18-19 2 p.

Research output: Contribution to journalArticleProfessional

Mansikan syyshoito kannattaa

Raatikainen, A. & Palonen, P., 3 Apr 2020, In : Puutarha & kauppa. 2020, 7, p. 6-7 2 p.

Research output: Contribution to journalArticleProfessional

Microstructural and physiological responses to cadmium stress under different nitrogen levels in Populus cathayana females and males

Liu, M., Bi, J., Liu, X., Kang, J., Korpelainen, H., Niinemets, U. & Li, C., Jan 2020, In : Tree Physiology. 40, 1, p. 30-45 16 p.

Research output: Contribution to journalArticleScientificpeer-review

Monitoring Fungal Communities With the Global Spore Sampling Project

Ovaskainen, O., Abrego, N., Somervuo, P. J., Palorinne, I., Hardwick, B. V. P., Pitkänen, J-M., Andrew, N. R., Niklaus, P. A., Schmidt, N. M., Seibold, S., Vogt, J., Zakharov, E. V., Hebert, P. D. N., Roslin, T. & Ivanova, N., 14 Jan 2020, In : Frontiers in Ecology and Evolution. 7, 511.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Morphological traits predict host-tree specialization in wood-inhabiting fungal communities

Purhonen, J., Ovaskainen, O., Halme, P., Komonen, A., Huhtinen, S., Kotiranta, H., Laessoe, T. & Abrego, N., Aug 2020, In : Fungal Ecology. 46, 8 p., 100863.

Research output: Contribution to journalArticleScientificpeer-review

Preparation and Characterization of Emulsion Gels from Whole Faba Bean Flour

Jiang, Z., Wang, J., Stoddard, F., Salovaara, H. & Sontag-Strohm, T., 7 Jun 2020, In : Foods. 9, 6, p. 755-770 15 p., foods9060755 .

Research output: Contribution to journalArticleScientificpeer-review

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Quantifying carbon stocks in urban parks under cold climate conditions

Lindén, L., Riikonen, A., Setälä, H. & Yli-Pelkonen, V., 1 Mar 2020, In : Urban Forestry & Urban Greening. 49, 9 p., 126633.

Research output: Contribution to journalArticleScientificpeer-review

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Recycling sludge on cropland as fertilizer – advantages and risks

Seleiman, M., Santanen, A. & Mäkelä, P., Apr 2020, In : Resources, Conservation and Recycling. 155, 10 p., 104647.

Research output: Contribution to journalReview ArticleScientificpeer-review

Re-designing organic grain legume cropping systems using systems agronomy

Reckling, M., Bergkvist, G., Watson, C. A., Stoddard, F. L. & Bachinger, J., Jan 2020, In : European Journal of Agronomy. 112, 13 p., 125951.

Research output: Contribution to journalArticleScientificpeer-review

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Resistance to Fusarium head blight in oats based on analyses of multiple field and greenhouse studies

Hautsalo, J., Jauhiainen, L., Hannukkala, A., Manninen, O., Vetelainen, M., Pietila, L., Peltoniemi, K. & Jalli, M., 29 Jun 2020, In : European Journal of Plant Pathology. 19 p.

Research output: Contribution to journalArticleScientificpeer-review

Roots play a key role in drought-tolerance of poplars as suggested by reciprocal grafting between male and female clones

Chen, S., Yi, L., Korpelainen, H., Yu, F. & Liu, M., Aug 2020, In : Plant Physiology and Biochemistry. 153, p. 81-91 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Root traits and rhizosphere processes reflect differential phosphorus acquisition strategies in contrasting Populus clones

Xia, Z., He, Y., Yu, L., Miao, J., Korpelainen, H. & Li, C., 1 Feb 2020, In : Forest Ecology and Management. 457, 8 p., 117750.

Research output: Contribution to journalArticleScientificpeer-review

Ruoantuotanto koettelee luonnon monimuotoisuutta

Translated title of the contribution: Food production challenges biodiversityHelenius, J., 2020, Elämän verkko: Luonnon monimuotoisuutta edistämässä. Mattila, H. (ed.). 1 ed. Tallinna: Gaudeamus, p. 260-270 11 p.

Research output: Chapter in Book/Report/Conference proceedingChapterGeneral public

Sampling and PCR method for detecting pathogenic Fusarium oxysporum strains in onion harvest

Latvala, S., Haapalainen, M., Kivijarvi, P., Suojala-Ahlfors, T., Iivonen, S. & Hannukkala, A., Mar 2020, In : Letters in Applied Microbiology. 70, 3, p. 210-220 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Seedling Growth and Phosphorus Uptake in Response to Different Phosphorus Sources

Mäkelä, P., Wasonga, D., Solano Hernandez, A. & Santanen, A., 28 Jul 2020, In : Agronomy. 10, p. 1-11 11 p., 1089.

Research output: Contribution to journalArticleScientificpeer-review

Open Access

Sex-related responses in rhizosphere processes of dioecious Populus cathayana exposed to drought and low phosphorus stress

Xia, Z., He, Y., Zhou, B., Korpelainen, H. & Li, C., Jul 2020, In : Environmental and Experimental Botany. 175, 10 p., 104049.

Research output: Contribution to journalArticleScientificpeer-review

Sex-specific strategies of phosphorus (P) acquisition in Populus cathayana as affected by soil P availability and distribution

Xia, Z., He, Y., Yu, L., Lv, R., Korpelainen, H. & Li, C., Jan 2020, In : New Phytologist. 225, 2, p. 782-792 11 p.

Research output: Contribution to journalArticleScientificpeer-review

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Stronger intra-specific competition aggravates negative effects of drought on the growth of Cunninghamia lanceolata

Guo, Q., Wu, X., Korpelainen, H. & Li, C., Jul 2020, In : Environmental and Experimental Botany. 175, 10 p., 104042.

Research output: Contribution to journalArticleScientificpeer-review

Sustainable mixed cropping systems for the boreal-nemoral region

Lizarazo Torres, C., Tuulos, A., Jokela, V. & Mäkelä, P., 22 Jul 2020, In : Frontiers in sustainable food systems. 4, p. 1-15 15 p., 103.

Research output: Contribution to journalReview ArticleScientificpeer-review

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Tavoitteena toimiva menestymisvyöhyketesti

Palonen, P., Finni, S., Luoranen, J. & Ruhanen, H., 6 Mar 2020, In : Puutarha & kauppa. 2020, 5, p. 28-29 2 p.

Research output: Contribution to journalArticleProfessional

Ten principles for conservation translocations of threatened wood-inhabiting fungi

Norden, J., Abrego, N., Boddy, L., Bassler, C., Dahlberg, A., Halme, P., Hallfors, M., Maurice, S., Menkis, A., Miettinen, O., Makipaa, R., Ovaskainen, O., Penttila, R., Saine, S., Snall, T. & Junninen, K., Apr 2020, In : Fungal Ecology. 44, 9 p., 100919.

Research output: Contribution to journalEditorialScientific

The transgenerational effects of solar short-UV radiation differed in two accessions of Vicia faba L. from contrasting UV environments

Yan, Y., Stoddard, F. L., Neugart, S., Oravec, M., Urban, O., Sadras, V. O. & Aphalo, P. J., May 2020, In : Journal of Plant Physiology. 248, 14 p., 153145.

Research output: Contribution to journalArticleScientificpeer-review

Trade Imports Increasingly Contribute to Plant Nutrient Inputs: Case of the Finnish Food System 1996-2014

Parviainen, T. & Helenius, J., 2 Jan 2020, In : Sustainability. 12, 2, p. 1-15 15 p., 702.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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2019

Agroecology

Helenius, J. P., Francis, C. A. & Wezel, A., Feb 2019, Oxford Research Encyclopedias: Environmental Science. Oxford University Press, 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

Open Access

Agroekologisilla symbiooseilla energiaomavaraiseen ja ravinteet kierrättävään ruokasektoriin?

Translated title of the contribution: Energy self-sufficient and recycling food sector through agroecological symbiosesHelenius, J., Jun 2019, In : Ruralia. 2019, 1, p. 8-9 2 p.

Research output: Contribution to journalArticleProfessional

Open Access
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A Novel Interaction Network Used by Potyviruses in Virus-Host Interactions at the Protein Level

Ala-Poikela, M., Rajamäki, M. & Valkonen, J., 2019, In : Viruses. 11, 1158, 24 p., 1158.

Research output: Contribution to journalArticleScientificpeer-review

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Apple B-box factors regulate light-responsive anthocyanin biosynthesis genes

Plunkett, B. J., Henry-Kirk, R., Friend, A., Diack, R., Helbig, S., Mouhu, K., Tomes, S., Dare, A. P., Espley, R. V., Putterill, J. & Allan, A. C., 28 Nov 2019, In : Scientific Reports. 9, 14 p., 17762.

Research output: Contribution to journalArticleScientificpeer-review

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Assessing changes in arthropod predator-prey interactions through DNA-based gut content analysis-variable environment, stable diet

Eitzinger, B., Abrego, N., Gravel, D., Huotari, T., Vesterinen, E. J. & Roslin, T., Jan 2019, In : Molecular Ecology. 28, 2, p. 266-280 15 p.

Research output: Contribution to journalArticleScientificpeer-review

Association of Shoot and Root Responses to Water Deficit in Young Faba Bean (Vicia faba L.) Plants

Belachew, K. Y., Nagel, K. A., Poorter, H. & Stoddard, F. L., 4 Sep 2019, In : Frontiers in plant science. 10, 10 p., 1063.

Research output: Contribution to journalArticleScientificpeer-review

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Asymmetric pruning reveals how organ connectivity alters the functional balance between leaves and roots of Chinese fir

Dong, T., Duan, B., Korpelainen, H., Niinemets, U. & Li, C., 1 Mar 2019, In : Journal of Experimental Botany. 70, 6, p. 1941-1953 13 p.

Research output: Contribution to journalArticleScientificpeer-review