• P.O. Box (Viikinkaari 1), Biocentre 3

    00014 Helsinki University

    Finland

Publications 2007 2019

2019

Arabidopsis RCD1 coordinates chloroplast and mitochondrial functions through interaction with ANAC transcription factors

Shapiguzov, A., Vainonen, J., Hunter, K. A., Tossavainen, H. P. M., Tiwari, A., Järvi, S., Hellman, M. H., Aarabi, F., Alseekh, S., Wybouw, B., Van Der Kelen, K., Nikkanen, L., Krasensky-Wrzaczek, J., Sipari, N. H., Keinänen, M., Tyystjaervi, E., Rintamäki, E., De Rybel, B., Salojärvi, J. T., Van Breusegem, F. & 6 othersFernie, A. R., Brosche, M. J., Permi, P. E. I., Aro, E-M., Wrzaczek, M. A. & Kangasjärvi, J. S., 15 Feb 2019, In : eLife. 8, 35 p., e43284.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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CRK2 enhances salt tolerance by regulating callose deposition in connection with PLDα1: CRK2 cell biology in salt stress

Hunter, K., Kimura, S., Rokka, A., Tran, C., Toyota, M., Kukkonen, J. P. & Wrzaczek, M., May 2019, (Accepted/In press) In : Plant Physiology.

Research output: Contribution to journalArticleScientificpeer-review

High-throughput sequencing data and the impact of plant gene annotation quality

Vaattovaara, A. F. M., Leppälä, J. M., Salojärvi, J. T. & Wrzaczek, M. A., 1 Feb 2019, In : Journal of Experimental Botany. 70, 4, p. 1069-1076 8 p., ery43.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Mechanistic insights into the evolution of DUF26-containing proteins in land plants

Vaattovaara, A., Brandt, B., Rajaraman, S., Safronov, O., Veidenberg, A., Luklová, M., Kangasjärvi, J., Löytynoja, A., Hothorn, M., Salojärvi, J. & Wrzaczek, M., 8 Feb 2019, In : Communications Biology. 2, 18 p., 56.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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2018

Arabidopsis downy mildew effector HaRxL106 suppresses plant immunity by binding to RADICAL-INDUCED CELL DEATH1

Wirthmueller, L., Asai, S., Rallapalli, G., Sklenar, J., Fabro, G., Kim, D. S., Lintermann, R., Jaspers, P., Wrzaczek, M., Kangasjärvi, J., MacLean, D., Menke, F. L. H., Banfield, M. J. & Jones, J. D. G., Oct 2018, In : New Phytologist. 220, 1, p. 232-248 17 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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2017

An Oomycete Effector Protein Induces Shade Avoidance In Arabidopsis And Attenuates Salicylate Signaling By Binding To Host Proteins Of The RADICAL-INDUCED CELL DEATH1 Family

Wirthmueller, L., Asai, S., Rallapalli, G., Sklenar, J., Fabro, G., Kim, D. S., Lintermann, R., Jaspers, P., Wrzaczek, M. A., Kangasjärvi, J. S., MacLean, D., Menke, F. LH., Banfield, M. J. & Jones, J. DG., 14 May 2017, In : BioRxiv beta : the preprint server for biology.

Research output: Contribution to journalArticleScientific

Open Access

Bound by Fate: The Role of Reactive Oxygen Species in Receptor-Like Kinase Signaling

Kimura, S., Waszczak, C. M., Hunter, K. A. & Wrzaczek, M. A., 3 Apr 2017, In : Plant Cell. 29, 4, p. 638 654 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Extraction and Curation of Gene Models for Plant Receptor Kinases for Phylogenetic Analysis

Vaattovaara, A. F. M., Salojärvi, J. T. & Wrzaczek, M. A., 2017, Plant Receptor Kinases : Methods and Protocols. Aalen, R. (ed.). New York: Springer, p. 79-91 79 p. (Methods in Molecular Biology; no. 1621).

Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

Genome sequencing and population genomic analyses provide insights into the adaptive landscape of silver birch

Salojärvi, J., Smolander, O-P., Nieminen, K., Rajaraman, S., Safronov, O., Safdari, P., Lamminmäki, A., Immanen, J., Lan, T., Tanskanen, J., Rastas, P., Amiryousefi, A., Jayaprakash, B., Kammonen, J. I., Hagqvist, R., Eswaran, G., Ahonen, V. H., Serra, J. A., Asiegbu, F. O., Barajas-Lopez, J. D. D. & 65 othersBlande, D., Blokhina, O., Blomster, T., Broholm, S., Brosche, M., Cui, F., Dardick, C., Ehonen, S. E., Elomaa, P., Escamez, S., Fagerstedt, K. V., Fujii, H., Gauthier, A., Gollan, P. J., Halimaa, P., Heino, P. I., Himanen, K., Hollender, C., Kangasjarvi, S., Kauppinen, L., Kelleher, C. T., Kontunen-Soppela, S., Koskinen, J. P., Kovalchuk, A., Karenlampi, S. O., Kärkönen, A. K., Lim, K-J., Leppälä, J., Macpherson, L., Mikola, J., Mouhu, K., Mähönen, A. P., Niinemets, U., Oksanen, E., Overmyer, K., Palva, E. T., Pazouki, L., Pennanen, V., Puhakainen, T., Poczai, P., Possen, B. J. H. M., Punkkinen, M., Rahikainen, M. M., Rousi, M., Ruonala, R., van der Schoot, C., Shapiguzov, A., Sierla, M., Sipilä, T. P., Sutela, S., Teeri, T. H., Tervahauta, A. I., Vaattovaara, A., Vahala, J., Vetchinnikova, L., Welling, A., Wrzaczek, M., Xu, E., Paulin, L. G., Schulman, A. H., Lascoux, M., Albert, V. A., Auvinen, P., Helariutta, Y. & Kangasjarvi, J., 8 May 2017, In : Nature Genetics. 49, 6, p. 904-912 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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High rate of adaptive evolution in two widespread European pines

Grivet, D., Avia, K., Vaattovaara, A., Eckert, A. J., Neale, D. B., Savolainen, O. & Gonzalez-Martinez, S. C., Dec 2017, In : Molecular Ecology. 26, 24, p. 6857-6870 14 p.

Research output: Contribution to journalArticleScientificpeer-review

The IDA-LIKE peptides IDL6 and IDL7 are negative modulators of stress responses in Arabidopsis thaliana

Vie, A. K., Najafi, J., Winge, P., Cattan, E., Wrzaczek, M. A., Kangasjärvi, J. S., Miller, G., Brembu, T. & Bones, A. M., 6 Jun 2017, In : Journal of Experimental Botany. 68, 13, p. 3557-3571 15 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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2016

MultiSite Gateway-Compatible Cell Type-Specific Gene-Inducible System for Plants

Siligato, R., Wang, X., Yadav, S. R., Lehesranta, S., Ma, G., Ursache, R., Sevilem, I., Zhang, J., Gorte, M., Prasad, K., Wrzaczek, M., Heidstra, R., Murphy, A., Scheres, B. & Mähönen, A. P., Feb 2016, In : Plant Physiology. 170, 2, p. 627-641 15 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access

Plant PARPs, PARGs and PARP-like Proteins

Vainonen, J. P., Shapiguzov, A., Vaattovaara, A. & Kangasjarvi, J., 2016, In : Current Protein and Peptide Science. 17, 7, p. 713-723 11 p.

Research output: Contribution to journalReview ArticleScientificpeer-review

2015

Apoplastic ROS production upon pollination by RbohH and RbohJ in Arabidopsis

Kaya, H., Iwano, M., Takeda, S., Kanaoka, M. M., Kimura, S., Abe, M. & Kuchitsu, K., 9 Mar 2015, In : Plant Signalling & Behavior. 10, 2, 3 p., e989050.

Research output: Contribution to journalArticleScientificpeer-review

GRIM REAPER peptide binds to receptor kinase PRK5 to trigger cell death in Arabidopsis

Wrzaczek, M., Vainonen, J. P., Stael, S., Tsiatsiani, L., Help-Rinta-Rahko, H., Gauthier, A., Kaufholdt, D., Bollhöner, B., Lamminmäki, A., Staes, A., Gevaert, K., Tuominen, H., Van Breusegem, F., Helariutta, Y. & Kangasjärvi, J., 2015, In : EMBO Journal. 34, 1, p. 55-66 12 p., e201488582.

Research output: Contribution to journalArticleScientificpeer-review

Integration of photosynthesis, development and stress as an opportunity for plant biology

Allahverdieyeva, Y., Battchikova, N., Brosche, M., Fujii, H., Kangasjärvi, S., Mulo, P., Mähönen, A. P., Nieminen, K. P. M., Overmyer, K. L., Salojärvi, J. T. & Wrzaczek, M. A., 14 Jul 2015, In : New Phytologist. 208, 3, p. 647-655 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Large-scale phenomics identifies primary and fine-tuning roles for CRKs in responses related to oxidative stress

Bourdais, G., Burdiak, P., Gauthier, A. G. B., Nitsch, L., Salojärvi, J. T., Rayapuram, C., Idänheimo, N. J., Hunter, K. A., Kimura, S., Merilo, E., Vaattovaara, A. F. M., Oracz, K., Kaufholdt, D., Pallon, A., Anggoro, D. T., Glow, D., Lowe, J., Zhou, J., Safronov, O., Puukko, T. & 13 othersAlbert, A., Lang, H., Ernst, D., Kollist, H., Brosche, M. J., Durner, J., Borst, J. W., Collinge, D. B., Karpinski, S., Lyngkjaer, M. F., Robatzek, S., Wrzaczek, M. A. & Kangasjärvi, J. S., 21 Jul 2015, In : PLoS Genetics. 11, 7, 36 p., e1005373.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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2014

Specificity in ROS signaling and transcript signatures

Vaahtera, L., Brosche, M., Wrzaczek, M. & Kangasjärvi, J., 2014, In : Antioxidants & Redox Signaling. 21, 9, p. 1422-1441 20 p.

Research output: Contribution to journalArticleScientificpeer-review

The Arabidopsis thaliana cysteine-rich receptor-like kinases CRK6 and CRK7 protect against apoplastic oxidative stress

Idänheimo, N., Gauthier, A., Salojärvi, J., Siligato, R., Brosche, M., Kollist, H., Mähönen, A. P., Kangasjärvi, J. & Wrzaczek, M., 7 Mar 2014, In : Biochemical and Biophysical Research Communications. 445, 2, p. 457-462 6 p.

Research output: Contribution to journalArticleScientificpeer-review

2013

ROS signaling loops—production, perception, regulation

Wrzaczek, M., Brosche, M. & Kangasjärvi, J., 31 Oct 2013, In : Current Opinion in Plant Biology. 16, 5, p. 575-582 8 p.

Research output: Contribution to journalArticleScientificpeer-review

2012

RCD1-DREB2A interaction in leaf senescence and stress responses in Arabidopsis thaliana

Vainonen, J. P., Jaspers, P., Wrzaczek, M., Lamminmäki, A., Reddy, R., Vaahtera, L., Brosche, M. & Kangasjärvi, J., 2012, In : Biochemical Journal. 442, p. 573-581 9 p.

Research output: Contribution to journalArticleScientificpeer-review

2011

Reactive Oxygen in Abiotic Stress Perception-From Genes to Proteins

Wrzaczek, M., Vainonen, J., Gauthier, A., Overmyer, K. & Kangasjärvi, J., 2011, Abiotic Stress Response in Plants : Physiological, Biochemical and Genetic Perspectives. Shanker, A. K. & Venkateswarlu, B. (eds.). Croatia: InTech, p. 27-54 28 p.

Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

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Regulatory Subunit B'{gamma} of Protein Phosphatase 2A Prevents Unnecessary Defense Reactions under Low Light in Arabidopsis.

Trotta, A., Wrzaczek, M., Scharte, J., Tikkanen, M., Konert, G., Raahikainen, M., Holmström, M., Hiltunen, H-M., Rips, S., Sipari, N. H., Mulo, P., Weis, E., von Schaewen, A., Aro, E-M. & Kangasjärvi, S., Jul 2011, In : Plant Physiology. 156, 3, p. 1464-1480 17 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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2010

Plant ROS and RNS: making plant science more radical than ever

Wrzaczek, M., Overmyer, K. & Kangasjärvi, J., 2010, In : Physiologia Plantarum. 138, 4, p. 357-359 3 p.

Research output: Contribution to journalArticleScientificpeer-review

Stress signaling III: Reactive oxygen species (ROS)

Brosche, M., Overmyer, K., Wrzaczek, M., Kangasjärvi, J. & Kangasjärvi, S., 2010, Abiotic Stress Adaptation in Plants: Physiological, Molecular and Genomic Foundation. Pareek, A., Sopory, S. K., Bohnert, H. J. & Govindjee (eds.). Dordrecht: Springer, p. 91-102 12 p.

Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

The RST and PARP-like domain containing SRO protein family: Analysis of protein structure, function and conservation in land plants

Jaspers, P., Overmyer, K., Wrzaczek, M., Vainonen, J. P., Blomster, T., Salojarvi, J., Reddy, R. A. & Kangasjärvi, J., 2010, In : BMC Genomics. 11, 170, p. - 20 p.

Research output: Contribution to journalArticleScientificpeer-review

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Transcriptional regulation of the CRK/DUF26 group of Receptor-like protein kinases by ozone and plant hormones in Arabidopsis

Wrzaczek, M., Brosche, M., Salojärvi, J. T., Kangasjärvi, S., Idänheimo, N., Mersmann, S., Robatzek, S., Karpiński, S., Karpińska, B. & Kangasjärvi, J., 2010, In : BMC Plant Biology. 10, 95

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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2009

Arabidopsis GRI is involved in the regulation of cell death induced by extracellular ROS

Wrzaczek, M., Brosche, M., Kollist, H. & Kangasjärvi, J., 2009, In : Proceedings of the National Academy of Sciences of the United States of America. 106, 13, p. 5412-5417 6 p.

Research output: Contribution to journalArticleScientificpeer-review

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Reactive Oxygen Species in Ozone Toxicity

Overmyer, K., Wrzaczek, M. & Kangasjärvi, J., 2009, Reactive Oxygen Species in Plant Signaling. Del Rio, L. A. & Puppo, A. (eds.). Dordrecht: Springer, p. 191-208 18 p.

Research output: Chapter in Book/Report/Conference proceedingChapterScientificpeer-review

Scorched earth strategy

Wrzaczek, M., Brosche, M. J. & Kangasjärvi, J., 2009, In : Plant Signalling & Behavior. 4, 7, p. 631-633 3 p.

Research output: Contribution to journalArticleScientificpeer-review

2007

A proteasome-regulated glycogen synthase kinase-3 modulates disease response in plants

Wrzaczek, M., Rozhon, W. & Jonak, C., 2007, In : Journal of Biological Chemistry. 282, 8, p. 5249-5255 7 p.

Research output: Contribution to journalArticleScientificpeer-review