Research Programs Unit

  • Finland

Publications 1966 2019

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Conference contribution
2018

Daily questionnaire to assess self-reported well-being during a software development project

Kuutila, M., Mäntylä, M. V., Claes, M. & Elovainio, M., 2018, Proceedings of the 3rd International Workshop on Emotion Awareness in Software Engineering. New York: ACM, p. 39-43 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Open Access
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Nordic Exome Variant Catalogue a Web Resource for Genomic Data Browsing

Sipilä, T. P., Metspalu, A., Häppölä, P., Palta, P., Kals, M. & Palotie, A., 2018, 2018 IEEE 14th International Conference on e-Science (e-Science). IEEE, p. 393 1 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

2016

Deep learning for tissue microarray image-based outcome prediction in patients with colorectal cancer

Bychkov, D., Turkki, R., Haglund, C., Linder, N. & Lundin, J., 2016, Medical Imaging 2016: Digital Pathology. Gurcan, M. N. & Madabhushi, A. (eds.). SPIE - INTERNATIONAL SOCIETY FOR OPTICAL ENGINEERING, p. 979115 6 p. (Proceedings of SPIE; vol. 9791).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Effectiveness of Projection Techniques in Genomic Data Analysis

Galdi, P., Serra, A., Greco, D. & Tagliaferri, R., 2016, 2nd IEEE International Forum on Research and Technologies for Society and Industry Leveraging a Better Tomorrow (RTSI). IEEE, p. 115-120 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

From Molecular Genetics and Biology to Effective Treatments of Lymphatic Disorders

Jeltsch, M., 13 May 2016, The European Journal of Lymphology and Related Problems. Vol. 28. p. 11 1 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

Identification of immune cell infiltration in hematoxylin-eosin stained breast cancer samples: Texture-based classification of tissue morphologies

Turkki, R., Linder, N., Kovanen, P. E., Pellinen, T. & Lundin, J., 2016, MEDICAL IMAGING 2016: DIGITAL PATHOLOGY. Gurcan, MN. & Madabhushi, A. (eds.). SPIE - INTERNATIONAL SOCIETY FOR OPTICAL ENGINEERING, 7 p. 979110. (Proceedings of SPIE; vol. 9791).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Using Hilbert-Huang Transform to Assess EEG Slow Wave Activity During Anesthesia in Post-Cardiac Arrest Patients

Kortelainen, J., Vayrynen, E., Huuskonen, U., Laurila, J., Koskenkari, J., Backman, J. T., Alahuhta, S., Seppanen, T. & Ala-Kokko, T., 2016, IEEE Engineering in Medicine and Biology Society Conference Proceedings: 2016 38TH ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY (EMBC). Patton, J., Barbieri, R., Ji, J., Jabbari, E., Dokos, S., Mukkamala, R., Guiraud, D., Jovanov, E., Dhaher, Y., Panescu, D., Vangils, M., Wheeler, B. & Dhawan, AP. (eds.). IEEE, Vol. 38. p. 1850-1853 4 p. (IEEE Engineering in Medicine and Biology Society Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Open Access
File
2015

A Bayesian Network analysis of the probabilistic relations between risk factors in the predisposition to type 2 diabetes

Sambo, F., Di Camillo, B., Franzin, A., Facchinetti, A., Hakaste, L., Kravic, J., Fico, G., Tuomilehto, J., Groop, L., Gabriel, R., Tuomi, T. & Cobelli, C., 2015, IEEE Engineering in Medicine and Biology Society. Conference. Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society. NEW YORK: IEEE, p. 2119-2122 4 p. (IEEE Engineering in Medicine and Biology Society Conference Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

A novel mechanism of action of metformin to ameliorate peripheral insulin resistance

Tolvanen, T. A., Polianskyte-Prause, Z., Lindfors, S. H., Wähälä, K. & Lehtonen, S. H., 2015, Emerging targets and molecules in middle space: Program & Abstracts. Wähälä, K., Koistinen, H. & Koskinen, A. (eds.). Helsinki: FInMedChem FInnish Pharmaceutical Society , 1 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

Deuterated Cholesterol Uptake Revealed With Stimulated Raman Microscopy

IEEE, 2015, 2015 CONFERENCE ON LASERS AND ELECTRO-OPTICS (CLEO). New York: IEEE, 2 p. (Conference on Lasers and Electro-Optics).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Lymphangiogenesis in Health and Disease

Jeltsch, M., 13 May 2015, The European Journal of Lymphology and Related Problems. Vol. 26. p. 8 1 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

2014

BREED-SPECIFIC REFERENCE RANGES FOR ECHOCARDIOGRAPHY IN SALUKIS

Lehtinen, S., Wiberg, M. E., Häggström, J. & Lohi, H. T., 2014, ECVIM Congress of the European Society of Veterinary Internal Medicine 2014. 1 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

2013

Scalable and Versatile k-mer Indexing for High-Throughput Sequencing Data

Välimäki, N. & Rivals, E., 2013, Bioinformatics Research and Applications: 9th International Symposium, ISBRA 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings. Cai, Z., Eulenstein, O., Janies, D. & Schwartz, D. (eds.). Springer-Verlag, p. 237-248 (Lecture Notes in Computer Science ; vol. 7875).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

2012

Comparative exoproteomics of Staphylococcus epidermidis of human and bovine origin to identify bacterial factors involved in adaptation into bovine host

Savijoki, K., Siljamäki, P., Lietzen, N., Varmanen, P. K., Kankainen, M. & Nyman, T., 2012, Farm animal proteomics: Proceedings of the 3rd Managing Commitee Meeting and 2nd Meeting of Working Groups 1, 2 & 3 of COST Action FA1002. Rodrigues, P., Eckersall, D. & de Almeida, A. (eds.). Wageningen: Wageningen Academic Publishers, p. 111-115 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

Current treatment of basilar artery occlusion

Lindsberg, P., Sairanen, T., Strbian, D. & Kaste, M., 2012, THROMBOLYSIS AND ACUTE STROKE TREATMENT: PREPARING FOR THE NEXT DECADE . del Zoppo, G. J. & Alexandrov, A. V. (eds.). Blackwell Science, p. 35-44 10 p. (Annals of the New York Academy of Sciences ; vol. 1268).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Efficient Path Kernels for Reaction Function Prediction

Heinonen, M., Välimäki, N., Mäkinen, V. & Rousu, J., 2012, 3rd International Conference on Bioinformatics Models, Methods and Algorithms, 1-4 Feb 2012, Algarve, Portugal.: Proceedings. 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

2011

Biomarker discovery via dependency analysis of multi-view functional genomics data

Faisal, A., Louhimo, R., Lahti, L. M., Kaski, S. & Hautaniemi, S., Dec 2011, Personalized medicine workshop, NIPS 2011. 7 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionProfessional

Systematic Use of Computational Methods Allows Stratifying Treatment Responders in Glioblastoma Multiforme

Louhimo, R., Aittomäki, V., Faisal, A., Laakso, M. K., Chen, P., Ovaska, K., Valo, E. A., Lahti, L. M., Rogojin, V., Kaski, S. & Hautaniemi, S., 2011, Critical Assessment of Massive Data Analysis (CAMDA) workshop.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

2010

INDIRECT BLOOD PRESSURE MEASUREMENT IN HEALTHY DOGS – COMPARISON OF THREE METHODS AND ASSESSMENT OF BREED AND STRESS LEVEL EFFECT ON SYSTOLIC ARTERIAL PRESSURE

Wiberg, M. E., Seppälä, E. H. & Lohi, H. T., 2010, Congress of European Society of Veterinary Internal Medicine.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

2009

Ruokatorven syövän ja mahasyövän syyt ja luonne

Translated title of the contribution: Etiology and pathogenesis of esophaegal and gastric cancerRistimäki, A., 2009, Ruokatorven syöpä ja mahasyöpä: Syöpäsäätiön XXXVI Symposiumi 5.–6.2.2009. Javanainen, M. (ed.). p. 17-21 (Focus Oncologiae; vol. 10).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

2007

Genetics of celiac disease

Saavalainen, P., 2007, Unknown host publication. p. 61-69 9 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

High efficiency sample transfer between IEF and sds-page separations on a miniaturized proteomics chip

Demianova, Z., Poeysae, E., Franssila, S. & Baumann, M., 2007, TRANSDUCERS '07 & EUROSENSORS XXI, DIGEST OF TECHNICAL PAPERS, VOLS 1 AND 2. p. U891-U892 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

2006

Probiotics for the prevention of beta cell autoimmunity in children at genetic risk of type 1 diabetes- the PRODIA study

Ljungberg, M., Korpela, R., Ilonen, J., Ludvigsson, J. & Vaapala, O., 2006, IMMUNOLOGY OF DIABETES IV : PROGRESS IN OUR UNDERSTANDING . Vol. 1079. p. 360-364 5 p. (ANNALS OF THE NEW YORK ACADEMY OF SCIENCES ; vol. 1079).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

2005

Dietary compliance in diabetes prevention project in Finland

Barlund, S., Uusitalo, U., Kleemola, P., Knip, M., Akerblom, HK. & Virtanen, SM., 2005, EARLY NUTRITION AND ITS LATER CONSEQUENCES: NEW OPPORTUNITIES. Koletzko, B., Dodds, P., Akerblom, H. & Ashwell, M. (eds.). Springer-Verlag, p. 189-189 1 p. (ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY; vol. 569).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

2004

Cyclooxygenase 2: From Inflammation to Carcinogenesis

Ristimäki, A., 2004, Cancer and Infammation: Novartis Foundation Symposium 256. Chadwick, D. J. & Goode, J. A. (eds.). p. 215-226 (Novartis Foundation Symposia).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

2002

GDNF family signalling in exocrine tissues: Distinct roles for GDNF and neurturin in parasympathetic neuron development

Rossi, J. & Airaksinen, M., 2002, LACRIMAL GLAND, TEAR FILM, AND DRY EYE SYNDROMES 3: BASIC SCIENCE AND CLINICAL RELEVANCE, PTS A & B . Sullivan, D. A., Stern, M. E., Tsubota, K., Dartt, D. A., Sullivan, R. M. & Bromberg, B. B. (eds.). New York: Kluwer Academic, p. 19-26 8 p. (Advances in Experimental Medicine and Biology; vol. 506 A).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

The effect of 2,3,7,8-TCDD on the foetal development of epidermal growth factor receptor-deficient mice

Kattainen, H., Huuskonen, H., Partanen, A-M., Miettinen, P., Pohjanvirta, R. & Tuomisto, J., 2002, 22nd International Symposium on Halogenated Environmental Organic Pollutants and POPs: Dioxin 2002. p. 383-386 4 p. (Organohalogen compounds; vol. 55).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

1999

Homing of mucosally activated lymphocytes in humans.

Kantele, A. M., 1999, Unknown host publication. p. 84–9

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

Pain - How to standardize a subjective measure

Kalso, EA., 1999, Unknown host publication. Tucker, GT. (ed.). p. 177-187 11 p. (INTERNATIONAL CONGRESS SERIES; vol. 8).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Route of opioid administration: Does it make a difference?

Kalso, E., 1999, Unknown host publication. Kalso, E., McQuay, HJ. & WiesenfeldHallin, Z. (eds.). p. 117-128 12 p. (PROGRESS IN PAIN RESEARCH AND MANAGEMENT; vol. 14).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

1997

Prevention of chronicity

Kalso, E., 1997, Unknown host publication. Jensen, TS., Turner, JA. & WiesenfeldHallin, Z. (eds.). p. 215-230 16 p. (PROGRESS IN PAIN RESEARCH AND MANAGEMENT; vol. 8).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

1994

LABORATORY TEST FOR FAMILIAL AMYLOIDOSIS

MAURY, C. P. J. & KANGAS, H., 1994, 22nd Congress of the International Society of Internal Medicine. Bologna: Monduzzi Editore S.p.A, p. 625-627 3 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review