Projects per year
International and National Collaboration
Publications and projects within past five years.
Profiles
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Kirsi Aaltonen
- Department of Virology - Postdoctoral Researcher
- Veterinary Microbiology and Epidemiology
- Helsinki One Health (HOH)
- Viral Zoonosis Research Unit
- Emerging Infections Research Group
- Doctoral Programme in Clinical Veterinary Medicine - Supervisor for doctoral programme
Person: U1 Research and teaching staff, U2 Teaching and research staff, UH
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Silja Åvall-Jääskeläinen
- Veterinary Biosciences - University Lecturer
- Veterinary Microbiology and Epidemiology
- Doctoral Programme in Microbiology and Biotechnology - Supervisor for doctoral programme
Person: U3 Research and teaching staff, UH
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Sami Junnikkala
- Veterinary Microbiology and Epidemiology
- Doctoral Programme in Clinical Veterinary Medicine - Supervisor for doctoral programme
- Veterinary Biosciences - University Lecturer
Person: U3 Research and teaching staff, UH
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Joanna Koort
- Veterinary Biosciences - University Lecturer
- Veterinary Microbiology and Epidemiology
Person: U3 Research and teaching staff, UH
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Olli Vapalahti
- Helsinki One Health (HOH)
- Veterinary Microbiology and Epidemiology
- Viral Zoonosis Research Unit
- Doctoral Programme in Integrative Life Science - Supervisor for doctoral programme
- Doctoral Programme in Microbiology and Biotechnology - Supervisor for doctoral programme
- Doctoral Programme in Clinical Veterinary Medicine - Supervisor for doctoral programme
- Doctoral Programme in Food Chain and Health - Supervisor for doctoral programme
- Doctoral Programme in Population Health - Supervisor for doctoral programme
- HUS Chemistry and Microbiology
- Department of Virology - Professor
- Veterinary Biosciences
Person: UH , Teaching and research personnel, U4 Research and teaching staff
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Opening Pandora’s Box: Assessing The Risks of Permafrost Thaw to Environment and Human Health
Väliranta, M. (Project manager), Korhola, A. (Project manager), Weckström, J. (Principal Investigator), Kontro, M. H. (Principal Investigator), Bianchi, F. (Principal Investigator), Passananti, M. (Co-Principal Investigator), Vapalahti, O. (Principal Investigator), Sironen, T. (Principal Investigator), Korhonen, E. M. (Co-Principal Investigator), Green, S. (Principal Investigator), Toivanen, R. (Principal Investigator), Kiss, E. A. (Co-Principal Investigator), Smura, T. (Co-Principal Investigator) & Pilkama, H. E. (Participant)
01/01/2025 → 31/12/2027
Project: Research project
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Pipeline for Rapid Diagnostics of Emergency Transboundary Infectious Diseases
Kant, R. (Project manager), Vapalahti, O. (Participant) & Sironen, T. (Principal Investigator)
01/09/2023 → 31/08/2027
Project: EU Horizon 2020: Innovation Actions (H2020-IA)
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Epidemiology, transmission, description, and disease control of poxviruses
Virtanen, J. M. E. (Principal Investigator), Aaltonen, K. (Participant), Kant, R. (Participant), Sironen, T. (Co-Principal Investigator), Vapalahti, O. (Co-Principal Investigator), Kinnunen, P. (Principal Investigator), Hautala, K. (Participant), Virtala, A.-M. (Participant), Smura, T. (Participant) & Jääskeläinen, A. J. (CoIlaborator)
Suomen Eläinlääketieteen säätiö, Orionin Tutkimussäätiö, Eläinlääketieteen tutkimuksen tukisäätiö sr, Sakari Alhopuron säätiö sr
01/01/2022 → 30/09/2025
Project: Research project
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Validating the scent detection dogs ability to correctly find COVID-19 patients
Hielm-Björkman, A. (Project manager), Vapalahti, O. (Participant), Kantele, A. (Participant) & Paajanen, J. (Participant)
24/09/2020 → …
Project: Research project
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DAPHNE: Developing Assessment Practices in Higher Education
Nevgi, A. (Project manager), Karaharju-Suvanto, T. (Participant), Korsberg, H. (Participant), Myyry, L. (Principal Investigator), Raekallio, M. (Participant), Siven, M. (Participant), Virtala, A.-M. (Principal Investigator), Salminen, O. (Participant), Vesalainen, M. (Participant) & Vuorensola, K. (Participant)
01/12/2017 → …
Project: Research project
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American mink as an animal model to study SARS-CoV-2 and vaccine response
Aaltonen, K., Virtanen, J., Kegler, K., Venkat, V., Kareinen, L., Korhonen, E. M., Niamsap, T., Malmgren, R., Korpela, J., Naves, R. A., Iso-Oja, M., Svenns, S., Häggvik, T., Ojala, E., Vapalahti, O., Peura, J., Sukura, A., Ritvos, O., Pasternack, A. & Nordgren, H. & 2 others, , 2025, (Submitted) In: bioRxiv.Research output: Contribution to journal › Article › Scientific › peer-review
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Coagulation Profile of Convalescent Plasma Donors and Recipients
Pitkänen, H. H., Helin, T., Khawaja, T., Pietilä, J.-P., Kajova, M., Välimaa, H., Vahlberg, T., Ihalainen, J., Vierikko, A., Vapalahti, O., Kantele, A. & Lassila, R., 2025, In: Clinical and Applied Thrombosis / Hemostasis. 31, 10 p., 10760296251317522.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Highly Pathogenic Avian Influenza (HPAI) H5N1 virus in Finland in 2021-2023-Genetic diversity of the viruses and infection kinetics in human dendritic cells
Altan, E., Avelin, V., Aaltonen, K., Korhonen, E., Laine, L., Lindh, E., Julkunen, I., Tammiranta, N., Nokireki, T., Gadd, T., Kakkola, L., Sironen, T. & Österlund, P., Jan 2025, In: Emerging microbes & infections. 14, 1, 13 p., 2447618.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Identifying viral infections through analysis of head space volatile organic compounds
Sanmark, E., Marjanen, P., Virtanen, J. M. E., Aaltonen, K., Tauriainen, S., Österlund, P., Mäkelä, M., Saari, S., Roine, A., Rönkkö, T. & Vartiainen, V. A., 2025, In: Journal of Breath Research. 19, 1, 10 p., 016004.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Lazypipe3: Customizable Virome Analysis Pipeline Enabling Fast and Sensitive Virus Discovery from NGS data
Weinstein, I., Vapalahti, O., Kant, R. & Smura, T., 3 May 2025, (Submitted) In: bioRxiv.Research output: Contribution to journal › Article › Scientific › peer-review
Activities
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Co-supervision of Sonja Pakkanen´s Licentiate thesis
Åvall-Jääskeläinen, S. (Supervisor)
2024 → …Activity: Examination types › Supervision of other thesis (Master's, Licentiate)
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Co-supervision of Laura Kanerva´s Licentiate thesis
Åvall-Jääskeläinen, S. (Supervisor)
2024Activity: Examination types › Supervision of other thesis (Master's, Licentiate)
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Equine dermatitis outbreak associated with parapoxvirus in Finland
Hautala, K. (Speaker), Virtanen, J. M. E. (Speaker), Utriainen, M. M. (Speaker), Dutra, L. (Speaker), Eskola, E. K. (Speaker), Airas, N. (Speaker), Uusitalo, R. (Speaker), Ahvenainen, E. R. (Speaker), Smura, T. (Speaker), Sironen, T. (Speaker), Vapalahti, O. (Speaker), Kant, R. (Speaker), Virtala, A.-M. (Speaker) & Kinnunen, P. (Speaker)
3 Oct 2024Activity: Talk or presentation types › Oral presentation
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Oppimisseikkailu 2023
Åvall-Jääskeläinen, S. (Attendee)
7 Mar 2023Activity: Participating in or organising an event types › Organisation and participation in conferences, workshops, courses, seminars
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Epidemiology and pathogenicity of Aleutian mink disease virus
Sironen, T. (Supervisor), Vapalahti, O. (Supervisor) & Kant, R. (Supervisor)
2022Activity: Examination types › Supervisor or co-supervisor of doctoral thesis
Prizes
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Academy Professor Finland: Academy of Finland
Vos de, W. M. (Recipient), 2010
Prize: Prizes and awards
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Apps4Finland 2012 Data Opening Award: Datavaalit
Lahti, L. (Recipient), 4 Dec 2012
Prize: Prizes and awards
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Apps4Finland Data Guide Public Votes award: Datawiki
Lahti, L. (Recipient), 4 Dec 2012
Prize: Prizes and awards
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Apps4Finland Data Opening Public Votes award: Datavaalit
Lahti, L. (Recipient), 4 Dec 2012
Prize: Prizes and awards
Datasets
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Data from: Tipping elements in the human intestinal ecosystem
Lahti, L. M. (Creator), Dryad, 8 Jul 2014
DOI: 10.5061/dryad.pk75d, http://datadryad.org/resource/doi:10.5061/dryad.pk75d
Dataset
Press/Media
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The coronavirus epidemic of 2020 in Finland began with five virus lineages
Kant, R., Smura, T., Sironen, T., Truong, P. & Vapalahti, O.
14/06/2022
1 Media contribution
Press/Media: Press / Media
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Three cases of sell-corona have been found in Finland - these things are known about the new variants
28/09/2021
1 item of Media coverage
Press/Media: Press / Media
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Completely new information was found about the origin of the corona pandemic - it takes the basis of the theory of laboratory leakage
17/09/2021
1 item of Media coverage
Press/Media: Press / Media
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A severe mosquito summer spread pogostan disease all over Finland - these are the symptoms
15/09/2021
1 item of Media coverage
Press/Media: Press / Media
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HS: Experts delight in new corona hybrid strategy: “A sensible and moderate entity”
07/09/2021
1 item of Media coverage
Press/Media: Press / Media