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Publications 2016 2019

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2019

A case report and follow-up of the first live birth after heterotopic transplantation of cryopreserved ovarian tissue in Eastern Europe

Tammiste, T., Kask, K., Padrik, P., Idla, K., Rosenstein, K., Jatsenko, T., Veerus, P. & Salumets, A., 14 May 2019, In : BMC Women's Health. 19, 8 p., 65.

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A dual colour FISH method for routine validation of sexed Bos taurus semen

Reinsalu, O., Scheler, O., Mikelsaar, R., Mikelsaar, A-V., Hallap, T., Jaakma, Ü., Padrik, P., Kavak, A., Salumets, A. & Kurg, A., 3 Apr 2019, In : BMC Veterinary Research. 15, 8 p., 104.

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A speculative outlook on embryonic aneuploidy: Can molecular pathways be involved?

Tguiko, O., Jatsenko, T., Grace, L. K. P., Kurg, A., Vermeesch, J. R., Lanner, F., Altmae, S. & Salumets, A., 1 Mar 2019, In : Developmental Biology. 447, 1, p. 3-13 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Chromosomal scan of single sperm cells by combining fluorescence-activated cell sorting and next-generation sequencing

Tran, Q. T., Jatsenko, T., Poolamets, O., Tsuiko, O., Lubenets, D., Reimand, T., Punab, M., Peters, M. & Salumets, A., Jan 2019, In : Journal of Assisted Reproduction and Genetics. 36, 1, p. 91-97 7 p.

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Detection of a balanced translocation carrier through trophectoderm biopsy analysis: a case report

Tšuiko, O., Dmitrijeva, T., Kask, K., Tammur, P., Tõnisson, N., Salumets, A. & Jatsenko, T., 18 Jun 2019, In : Molecular cytogenetics. 12, 1

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Hyperglycosylated hCG activates LH/hCG-receptor with lower activity than hCG

Koistinen, H., Koel, M., Peters, M., Rinken, A., Lundin, K., Tuuri, T., Tapanainen, J. S., Alfthan, H., Salumets, A., Stenman, U-H. & Lavogina, D., 5 Jan 2019, In : Molecular and Cellular Endocrinology. 479, p. 103-109 7 p.

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MUC20 expression marks the receptive phase of the human endometrium

Stepanjuk, A., Koel, M., Pook, M., Saare, M., Jääger, K., Peters, M., Krjutškov, K., Ingerpuu, S. & Salumets, A., 11 May 2019, In : Reproductive BioMedicine Online.

Research output: Contribution to journalArticleScientificpeer-review

2018

Aberrant expression of genes associated with stemness and cancer in endometria and endometrioma in a subset of women with endometriosis

Ponandai-Srinivasan, S., Andersson, K. L., Nister, M., Saare, M., Hassan, H. A., Varghese, S. J., Peters, M., Salumets, A., Gemzell-Danielsson, K. & Lalitkumar, P. G. L., Oct 2018, In : Human Reproduction. 33, 10, p. 1924-1938 15 p.

Research output: Contribution to journalArticleScientificpeer-review

A Two-Cohort RNA-seq Study Reveals Changes in Endometrial and Blood miRNome in Fertile and Infertile Women

Rekker, K., Altmae, S., Suhorutshenko, M., Peters, M., Martinez-Blanch, J. F., Codoner, F. M., Vilella, F., Simon, C., Salumets, A. & Velthut-Meikas, A., Dec 2018, In : Genes. 9, 12, 17 p., 574.

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Computational framework for targeted high-coverage sequencing based NIPT

Teder, H., Paluoja, P., Salumets, A., Krjutškov, K. & Palta, P., 1 Jan 2018, (Submitted) In : bioRxiv : the preprint server for biology .

Research output: Contribution to journalArticleScientific

Creating basis for introducing NIPT in the Estonian public health setting

Zhilina, O., Rekker, K., Kaplinski, L., Sauk, M., Paluoja, P., Teder, H., Ustav, E-L., Tonisson, N., Ridnoi, K., Palta, P., Krjutshkov, K., Kurg, A. & Salumets, A., 1 Jan 2018, In : bioRxiv : the preprint server for biology .

Research output: Contribution to journalArticleScientific

Differentially-Expressed miRNAs in Ectopic Stromal Cells Contribute to Endometriosis Development: The Plausible Role of miR-139-5p and miR-375

Rekker, K., Tasa, T., Saare, M., Samuel, K., Kadastik, U., Karro, H., Goette, M., Salumets, A. & Peters, M., Dec 2018, In : International Journal of Molecular Sciences. 19, 12, 11 p., 3789.

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Endometrial receptivity revisited: endometrial transcriptome adjusted for tissue cellular heterogeneity

Suhorutshenko, M., Kukushkina, V., Velthut-Meikas, A., Altmäe, S., Peters, M., Mägi, R., Krjutskov, K., Koel, M., Codoner, F. M., Martinez-Blanch, J. F., Vilella, F., Simon, C., Salumets, A. & Laisk, T., Nov 2018, In : Human Reproduction. 33, 11, p. 2074-2086 13 p.

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Karyotype of the blastocoel fluid demonstrates low concordance with both trophectoderm and inner cell mass

Tsuiko, O., Zhigalina, D., Jatsenko, T., Skryabin, N. A., Kanbekova, O. R., Artyukhova, V. G., Svetlakov, A., Teearu, K., Trosin, A., Salumets, A., Kurg, A. & Lebedev, I. N., Jun 2018, In : Fertility and Sterility : official journal of the American Fertility Society . 109, 6, p. 1127-+ 9 p.

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Large-scale genome-wide meta-analysis of polycystic ovary syndrome suggests shared genetic architecture for different diagnosis criteria

23andMe Res Team, Dec 2018, In : PLoS Genetics. 14, 12, 20 p., 1007813.

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Large-scale meta-analysis highlights the hypothalamic-pituitary-gonadal axis in the genetic regulation of menstrual cycle length

Laisk, T., Kukuskina, V., Palmer, D., Laber, S., Chen, C-Y., Ferreira, T., Rahmioglu, N., Zondervan, K., Becker, C., Smoller, J. W., Lippincott, M., Salumets, A., Granne, I., Seminara, S., Neale, B., Mägi, R. & Lindgren, C. M., 15 Dec 2018, In : Human Molecular Genetics. 27, 24, p. 4323-4332 10 p.

Research output: Contribution to journalArticleScientificpeer-review

NIPTmer: rapid k-mer-based software package for detection of fetal aneuploidies

Sauk, M., Zilina, O., Kurg, A., Ustav, E-L., Peters, M., Paluoja, P., Roost, A. M., Teder, H., Palta, P., Brison, N., Vermeesch, J. R., Krjutskov, K., Salumets, A. & Kaplinski, L., 4 Apr 2018, In : Scientific Reports. 8, 9 p., 5616.

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rs10732516 polymorphism at the IGF2/H19 locus associates with genotype-specific effects on placental DNA methylation and birth weight of newborns conceived by assisted reproductive technology

Marjonen, H. M., Auvinen, P., Kahila, H., Tšuiko, O., Kõks, S., Tiirats, A., Viltrop, T., Tuuri, T., Söderström-Anttila, V., Suikkari, A-M., Salumets, A., Tiitinen, A. & Kaminen-Ahola, N., 18 Jun 2018, In : Clinical epigenetics. 10, 11 p., 80.

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TAC-seq: targeted DNA and RNA sequencing for precise biomarker molecule counting

Teder, H., Koel, M., Paluoja, P., Jatsenko, T., Rekker, K., Laisk-Podar, T., Kukuskina, V., Velthut-Meikas, A., Fjodorova, O., Peters, M., Kere, J., Salumets, A., Palta, P. & Krjutskov, K., 18 Dec 2018, In : Npj genomic medicine. 3, 8 p., 34.

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Thinning and drilling laser-assisted hatching in thawed embryo transfer: A randomized controlled trial

Le, M. T., Nguyen, T. T. A., Nguyen, T. T. T., Nguyen, V. T., Le, D. D., Nguyen, V. Q. H., Cao, N. T., Aints, A. & Salumets, A., 2018, In : Clinical and experimental reproductive medicine. 45, 3, p. 129-134 6 p.

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Whole exome sequencing of benign pulmonary metastasizing leiomyoma reveals mutation in the BMP8B gene

Soritsa, D., Teder, H., Roosipuu, R., Tamm, H., Laisk-Podar, T., Soplepmann, P., Altraja, A., Salumets, A. & Peters, M., 31 Jan 2018, In : BMC Medical Genetics. 19, 7 p., 20.

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2017

A novel hypothesis for histone-to-protamine transition in Bos taurus spermatozoa

Sillaste, G., Kaplinski, L., Meier, R., Jaakma, U., Eriste, E. & Salumets, A., Mar 2017, In : Reproduction. 153, 3, p. 241-251 11 p.

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Compliance to the recommended use of folic acid supplements for women in Sweden is higher among those under treatment for infertility than among fertile controls and is also related to socioeconomic status and lifestyle

Murto, T., Yngve, A., Svanberg, A. S., Altmae, S., Salumets, A., Wanggren, K. & Stavreus-Evers, A., 2017, In : Food & Nutrition Research. 61, 7 p., 1334483.

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Demographic associations for autoantibodies in disease-free individuals of a European population

Haller-Kikkatalo, K., Alnek, K., Metspalu, A., Mihailov, E., Metskula, K., Kisand, K., Pisarev, H., Salumets, A. & Uibo, R., 28 Mar 2017, In : Scientific Reports. 7, 12 p., 44846.

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Determination of biological activity of gonadotropins hCG and FSH by Forster resonance energy transfer based biosensors

Mazina, O., Allikalt, A., Tapanainen, J. S., Salumets, A. & Rinken, A., 9 Feb 2017, In : Scientific Reports. 7, 7 p., 42219.

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DNA methylation changes in endometrium and correlation with gene expression during the transition from pre-receptive to receptive phase

Kukushkina, V., Modhukur, V., Suhorutsenko, M., Peters, M., Magi, R., Rahmioglu, N., Velthut-Meikas, A., Altmae, S., Esteban, F. J., Vilo, J., Zondervan, K., Salumets, A. & Laisk-Podar, T., 20 Jun 2017, In : Scientific Reports. 7, 11 p., 3916.

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Genome stability of bovine in vivo-conceived cleavage-stage embryos is higher compared to in vitro-produced embryos

Tsuiko, O., Catteeuw, M., Esteki, M. Z., Destouni, A., Pascottini, O. B., Besenfelder, U., Havlicek, V., Smits, K., Kurg, A., Salumets, A., D'Hooghe, T., Voet, T., Soom, A. V. & Vermeesch, J. R., Nov 2017, In : Human Reproduction. 32, 11, p. 2348-2357 10 p.

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High-throughput mRNA sequencing of stromal cells from endometriomas and endometrium

Rekker, K., Saare, M., Eriste, E., Tasa, T., Kukuskina, V., Roost, A. M., Anderson, K., Samuel, K., Karro, H., Salumets, A. & Peters, M., Jul 2017, In : Reproduction. 154, 1, p. 93-100 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Meta-signature of human endometrial receptivity: a meta-analysis and validation study of transcriptomic biomarkers

Altmae, S., Koel, M., Vosa, U., Adler, P., Suhorutsenko, M., Laisk-Podar, T., Kukushkina, V., Saare, M., Velthut-Meikas, A., Krjutskov, K., Aghajanova, L., Lalitkumar, P. G., Gemzell-Danielsson, K., Giudice, L., Simon, C. & Salumets, A., 30 Aug 2017, In : Scientific Reports. 7, 15 p., 10077.

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The Influence of Different Maternal Microbial Communities on the Development of Infant Gut and Oral Microbiota

Drell, T., Stsepetova, J., Simm, J., Rull, K., Aleksejeva, A., Antson, A., Tillmann, V., Metsis, M., Sepp, E., Salumets, A. & Mandar, R., 30 Aug 2017, In : Scientific Reports. 7, 9 p., 9940.

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2016

C14orf132 gene is possibly related to extremely low birth weight

Tiirats, A., Viltrop, T., Noukas, M., Reimann, E., Salumets, A. & Koks, S., 22 Sep 2016, In : BMC Genetics. 17, 5 p., 132.

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Compartmentalized gene expression profiling of receptive endometrium reveals progesterone regulated ENPP3 is differentially expressed and secreted in glycosylated form

Boggavarapu, N. R., Lalitkumar, S., Joshua, V., Kasvandik, S., Salumets, A., Lalitkumar, P. G. & Gemzell-Danielsson, K., 26 Sep 2016, In : Scientific Reports. 6, 13 p., 33811.

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Copy number variation analysis detects novel candidate genes involved in follicular growth and oocyte maturation in a cohort of premature ovarian failure cases

Tsuiko, O., Noukas, M., Zilina, O., Hensen, K., Tapanainen, J. S., Magi, R., Kals, M., Kivistik, P. A., Haller-Kikkatalo, K., Salumets, A. & Kurg, A., Aug 2016, In : Human Reproduction. 31, 8, p. 1913-1925 13 p.

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