Andriy Kovalchuk

Publications

Research output per year 2013 2013 2018 2019 2021 2023 2024

• 31 Article
• 4 Anthology or special issue
• 3 Chapter
• 3 Editorial
• 5 More
  • 2 Foreword / postscript
  • 2 Review Article
  • 1 Letter

Research output per year

Research output per year

Search results

• 2024

  (3007) Proposal to conserve the name Pleopeltis thunbergiana (Lepisorus thunbergianus) against P. elongata (L. elongatus) (Polypodiaceae)

  Kovalchuk, A., Feb 2024, In: Taxon. 73, 1, p. 307-307 1 p.

  Research output: Contribution to journal › Editorial › Scientific

  Open Access

• Notes on the taxonomy of the species complex Symphytum tuberosum (Boraginaceae) and on the interpretation of the name S. microcalix

  Kovalchuk, A., 2024, In: Ukrainian Botanical Journal. 81, 3, p. 189-202 14 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File
• 2023

  (106-107) Requests for binding decisions on the descriptive statements associated with Larix archangelica and L. dahurica

  Kovalchuk, A., Jun 2023, In: Taxon. 72, 3, p. 675-676 2 p.

  Research output: Contribution to journal › Editorial › Scientific › peer-review

• (325) Proposal to amend Article 38.4, to extend its application to a reference to a previously and effectively published description or diagnosis

  Kovalchuk, A., Aug 2023, In: Taxon. 72, 4, p. 956-957 2 p.

  Research output: Contribution to journal › Editorial › Scientific

• Forest Microbiology: Tree Diseases & Pests

  Asiegbu, F. & Kovalchuk, A., 2023, Elsevier Academic Press. 536 p.

  Research output: Book/Report › Anthology or special issue › Scientific › peer-review

• Pseudocyclosorus pubescens, the correct name for Pseudocyclosorus canus (Thelypteridaceae)

  Kovalchuk, A., 4 Oct 2023, In: Phytotaxa. 618, 3, p. 291-295 5 p.

  Research output: Contribution to journal › Letter › Scientific › peer-review

• Understanding and applying biological resilience, from genes to ecosystems

  Thorogood, R., Mustonen, V., Aleixo, A., Aphalo, P. J., Asiegbu, F. O., Cabeza, M., Cairns, J., Candolin, U., Cardoso, P., Eronen, J. T., Hällfors, M., Hovatta, I., Juslén, A., Kovalchuk, A., Kulmuni, J., Kuula, L., Mäkipää, R., Ovaskainen, O., Pesonen, A-K., Primmer, C. R., & 5 othersSaastamoinen, M., Schulman, A. H., Schulman, L., Strona, G. & Vanhatalo, J., 2023, In: npj Biodiversity. 2, 13 p., 16.

  Research output: Contribution to journal › Review Article › peer-review

  Open Access

  File

• Validation of the name Abacopteris nitida (Thelypteridaceae)

  Kovalchuk, A., 6 Oct 2023, In: Phytotaxa. 619, 2, p. 203-204 2 p.

  Research output: Contribution to journal › Article › Scientific › peer-review
• 2022

  Forest Microbiology: Forest Tree Health

  Asiegbu, F. & Kovalchuk, A., Jul 2022, Elsevier Academic Press. 490 p.

  Research output: Book/Report › Anthology or special issue › Scientific › peer-review

• Heterobasidion annosum s.l.: Biology, genomics, and pathogenicity factors

  Kovalchuk, A., Wen, Z., Sun, H. & Asiegbu, F., 2022, Forest Microbiology: Forest Tree Health. Elsevier Academic Press, Vol. 2. p. 345 - 359

  Research output: Chapter in Book/Report/Conference proceeding › Chapter › Scientific › peer-review

• Preface

  Asiegbu, F. O. & Kovalchuk, A., 1 Jan 2022, Forest Microbiology: Volume 2: Forest Tree Health. Asiegbu, F. O. & Kovalchuk, A. (eds.). Elsevier, Vol. 2. p. xvii

  Research output: Chapter in Book/Report/Conference proceeding › Foreword / postscript › peer-review
• 2021

  An introduction to forest biome and associated microorganisms

  Asiegbu, F. & Kovalchuk, A., 2021, Forest Microbiology: Tree Microbiome: Phyllosphere, Endosphere and Rhizosphere. Asiegbu, F. O. & Kovalchuk, A. (eds.). Academic Press, p. 3-18 16 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter › Scientific › peer-review

• Forest Microbiology: Volume 1: Tree Microbiome: Phyllosphere, Endosphere and Rhizosphere: A volume in Forest Microbiology

  Asiegbu, F. O. (ed.) & Kovalchuk, A. (ed.), 1 Jan 2021, Elsevier. 411 p.

  Research output: Book/Report › Anthology or special issue › Scientific › peer-review

• Forest Microbiology, Volume 1: Tree Microbiome: Phyllosphere, Endosphere and Rhizosphere

  Asiegbu, F. & Kovalchuk, A., 2021, 1 ed. United Kingdom: Academic Press. 436 p.

  Research output: Book/Report › Anthology or special issue › Scientific › peer-review

• Physiochemical and molecular features of the necrotic lesion in Heterobasidion—Norway spruce pathosystem

  Liu, M., Jaber, E., Kovalchuk, A. & Asiegbu, F., May 2021, In: Tree Physiology. 41, 5, p. 791 - 800 10 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• Preface

  Asiegbu, F. O. & Kovalchuk, A., 1 Jan 2021, Forest Microbiology: Volume 1: Tree Microbiome: Phyllosphere, Endosphere and Rhizosphere. Elsevier, p. xv-xv

  Research output: Chapter in Book/Report/Conference proceeding › Foreword / postscript › peer-review
• 2020

  Genome sequencing of Rigidoporus microporus provides insights on genes important for wood decay, latex tolerance and interspecific fungal interactions

  Oghenekaro, A. O., Kovalchuk, A., Raffaello, T., Camarero, S., Gressler, M., Henrissat, B., Lee, J., Liu, M., Martínez, A. T., Miettinen, O., Mihaltcheva, S., Pangilinan, J., Ren, F., Riley, R., Ruiz-Dueñas, F. J., Serrano, A., Thon, M. R., Wen, Z., Zeng, Z., Barry, K., & 3 othersGrigoriev, IV., Martin, F. & Asiegbu, F. O., 23 Mar 2020, In: Scientific Reports. 10, 1, 15 p., 5250.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Phylogeny of Acanthophyllum s.l. revisited: An update on generic concept and sectional classification

  Pirani, A., Moazzeni, H., Zarre, S., Rabeler, R. K., Oxelman, B., Pavlenko, A. V. & Kovalchuk, A., Jun 2020, In: Taxon. 69, 3, p. 500-514 15 p.

  Research output: Contribution to journal › Article › Scientific › peer-review
• 2019

  Dual RNA-seq analysis provides new insights into interactions between Norway spruce and necrotrophic pathogen Heterobasidion annosum s.l.

  Kovalchuk, A., Zeng, Z., Ghimire, R. P., Kivimäenpää, M., Raffaello, T., Liu, M., Mukrimin, M., Kasanen, R. A. O., Sun, H., Julkunen-Tiitto, R., Holopainen, J. K. & Asiegbu, F. O., 3 Jan 2019, In: BMC Plant Biology. 19, 2, 17 p., 2.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Euro plus Med-Checklist Notulae, 11

  Von Raab-Straube, E., Raus, T., Bazos, I., Cornec, J. P., De Belair, G., Dimitrakopoulos, P. G., El Mokni, R., Fateryga, A. V., Fateryga, V. V., Fridlender, A., Gil, J., Grigorenko, V. N., Hand, R., Kovalchuk, A., Mastrogianni, A., Otto, R., Raetzel, S., Raus, T., Ristow, M., Salas Pascual, M., & 10 othersStrid, A., Svirin, S. A., Tsiripidis, I., Uhlich, H., Vela, E., Verloove, F., Vidakis, K., Yena, A. V., Yevseyenkov, P. E. & Zeddam, A., Dec 2019, In: Willdenowia : Annals of the Botanic Garden and Botanical Museum Berlin. 49, 3, p. 421-445 25 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Evaluation of potential genetic and chemical markers for Scots pine tolerance against Heterobasidion annosum infection

  Mukrimin, M., Kovalchuk, A., Ghimire, R. P., Kivimaenpaa, M., Sun, H., Holopainen, J. K. & Asiegbu, F. O., Dec 2019, In: Planta. 250, 6, p. 1881-1895 15 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Forest Tree Microbiomes and Associated Fungal Endophytes: Functional Roles and Impact on Forest Health

  Terhonen, E., Blumenstein, K., Kovalchuk, A. & Asiegbu, F. O., Jan 2019, In: Forests. 10, 1, 32 p., 42.

  Research output: Contribution to journal › Review Article › peer-review

  Open Access

  File

• Fourier-transform infrared (FT-IR) spectroscopy analysis discriminates asymptomatic and symptomatic Norway spruce trees

  Mukrimin, M., Conrad, A. O., Kovalchuk, A., Julkunen-Tiitto, R., Bonello, P. & Asiegbu, F. O., Dec 2019, In: Plant Science. 289, 7 p., 110247.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Genome description of Phlebia radiata 79 with comparative genomics analysis on lignocellulose decomposition machinery of phlebioid fungi

  Mäkinen, M., Kuuskeri, J., Laine, P., Smolander, O-P., Kovalchuk, A., Zeng, Z., Asiegbu, F., Paulin, L., Auvinen, P. & Lundell, T., 28 May 2019, In: BMC Genomics. 20, 22 p., 430.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Genome-wide DNA methylation and transcriptomic profiles in the lifestyle strategies and asexual development of the forest fungal pathogen Heterobasidion parviporum

  Zeng, Z., Wu, J., Kovalchuk, A., Raffaello, T., Wen, Z., Liu, M. & Asiegbu, F. O., 2 Jan 2019, In: Epigenetics. 14, 1, p. 16-40 25 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Tissue microbiome of Norway spruce affected by Heterobasidion-induced wood decay.

  Ren, F., Kovalchuk, A., Mukrimin, M., Liu, M., Zeng, Z., Ghimire, R., Kivimäenpää, M., Holopainen, J. K., Sun, H. & Asiegbu, F. O., Apr 2019, In: Microbial Ecology. 77, 3, p. 640-650 11 p.

  Research output: Contribution to journal › Article › Scientific › peer-review
• 2018

  A Gene Encoding Scots Pine Antimicrobial Protein Sp-AMP2 (PR-19) Confers Increased Tolerance against Botrytis cinerea in Transgenic Tobacco

  Jaber, E., Kovalchuk, A., Raffaello, T., Keriö, S., Teeri, T. & Asiegbu, F. O., Jan 2018, In: Forests. 9, 1, 15 p., 10.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Biocontrol Potential of Forest Tree Endophytes

  Terhonen, E., Kovalchuk, A., Zarsav, A. & Asiegbu, F. O., 2018, Endophytes of Forest Trees . Pirttilä, A. M. & Frank, C. (eds.). Second Edition ed. Springer, Vol. 2. p. 283 – 318 35 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter › Scientific › peer-review

  Open Access

  File

• Genome-Wide Exon-Capture Approach Identifies Genetic Variants of Norway Spruce Genes Associated With Susceptibility to Heterobasidion parviporum Infection

  Mukrimin, M., Kovalchuk, A., Neves, L. G., Jaber, E. H. A., Haapanen, M., Kirst, M. & Asiegbu, F. O., 12 Jun 2018, In: Frontiers in plant science. 9, 13 p., 793.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Intraspecific comparative genomics of isolates of the Norway spruce pathogen (Heterobasidion parviporum) and identification of its potential virulence factors

  Zeng, Z., Sun, H., Vainio, E. J., Raffaello, T., Kovalchuk, A., Morin, E., Duplessis, S. & Asiegbu, F. O., 27 Mar 2018, In: BMC Genomics. 19, 21 p., 220.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Mycobiome analysis of asymptomatic and symptomatic Norway spruce trees naturally infected by the conifer pathogens Heterobasidion spp.

  Kovalchuk, A., Mukrimin, M., Zeng, Z., Raffaello, T., Liu, M., Kasanen, R., Sun, H. & Asiegbu, F. O., Oct 2018, In: Environmental microbiology reports. 10, 5, p. 532-541 10 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File
• 2017

  CYPome of the conifer pathogen Heterobasidion irregulare: Inventory, phylogeny, and transcriptional analysis of the response to biocontrol

  Mgbeahuruike, A. C., Kovalchuk, A., Ubhayasekera, W., Nelson, D. R. & Yadav, J. S., Feb 2017, In: Fungal Biology. 121, 2, p. 158-171 14 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Differential responses of Scots pine stilbene synthase and chalcone synthase genes to Heterobasidion annosum infection

  Kovalchuk, A., Zhu, L., Kerio, S. & Asiegbu, F. O., Aug 2017, In: Forest Pathology. 47, 4, 5 p., 12348.

  Research output: Contribution to journal › Article › Scientific › peer-review

• Genome sequencing and population genomic analyses provide insights into the adaptive landscape of silver birch

  Salojärvi, J., Smolander, O-P., Nieminen, K., Rajaraman, S., Safronov, O., Safdari, P., Lamminmäki, A., Immanen, J., Lan, T., Tanskanen, J., Rastas, P., Amiryousefi, A., Jayaprakash, B., Kammonen, J. I., Hagqvist, R., Eswaran, G., Ahonen, V. H., Serra, J. A., Asiegbu, F. O., Barajas-Lopez, J. D. D., & 65 othersBlande, D., Blokhina, O., Blomster, T., Broholm, S., Brosche, M., Cui, F., Dardick, C., Ehonen, S. E., Elomaa, P., Escamez, S., Fagerstedt, K. V., Fujii, H., Gauthier, A., Gollan, P. J., Halimaa, P., Heino, P. I., Himanen, K., Hollender, C., Kangasjarvi, S., Kauppinen, L., Kelleher, C. T., Kontunen-Soppela, S., Koskinen, J. P., Kovalchuk, A., Karenlampi, S. O., Kärkönen, A. K., Lim, K-J., Leppälä, J., Macpherson, L., Mikola, J., Mouhu, K., Mähönen, A. P., Niinemets, U., Oksanen, E., Overmyer, K., Palva, E. T., Pazouki, L., Pennanen, V., Puhakainen, T., Poczai, P., Possen, B. J. H. M., Punkkinen, M., Rahikainen, M. M., Rousi, M., Ruonala, R., van der Schoot, C., Shapiguzov, A., Sierla, M., Sipilä, T. P., Sutela, S., Teeri, T. H., Tervahauta, A. I., Vaattovaara, A., Vahala, J., Vetchinnikova, L., Welling, A., Wrzaczek, M., Xu, E., Paulin, L. G., Schulman, A. H., Lascoux, M., Albert, V. A., Auvinen, P., Helariutta, Y. & Kangasjarvi, J., 8 May 2017, In: Nature Genetics. 49, 6, p. 904-912 12 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File
• 2016

  De novo transcriptomic assembly and profiling of Rigidoporus microporus during saprotrophic growth on rubber wood

  Oghenekaro, A. O., Raffaello, T., Kovalchuk, A. & Asiegbu, F. O., 15 Mar 2016, In: BMC Genomics. 17, 17 p., 234.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Dominant Tree Species and Soil Type Affect the Fungal Community Structure in a Boreal Peatland Forest

  Sun, H., Terhonen, E., Kovalchuk, A., Tuovila, H., Chen, H., Oghenekaro, A. O., Heinonsalo, J., Kohler, A., Kasanen, R., Vasander, H. & Asiegbu, F. O., May 2016, In: Applied and Environmental Microbiology. 82, 9, p. 2632-2643 12 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• Genome organisation and expression profiling of ABC protein-encoding genes in Heterobasidion annosum s.l. complex

  Baral, B., Kovalchuk, A. & Asiegbu, F. O., Mar 2016, In: Fungal Biology. 120, 3, p. 376-384 9 p.

  Research output: Contribution to journal › Article › Scientific › peer-review
• 2015

  A cerato-platanin-like protein HaCPL2 from Heterobasidion annosum sensu stricto induces cell death in Nicotiana tabacum and Pinus sylvestris

  Chen, H., Quintana, J., Kovalchuk, A., Ubhayasekera, W. & Asiegbu, F. O., Nov 2015, In: Fungal Genetics and Biology. 84, p. 41-51 11 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• Activation of defence pathways in Scots pine bark after feeding by pine weevil (Hylobius abietis)

  Kovalchuk, A., Raffaello, T., Jaber, E., Keriö, S., Ghimire, R., Lorenz, W. W., Dean, J. F. D., Holopainen, J. K. & Asiegbu, F. O., 6 May 2015, In: BMC Genomics. 16, 15 p., 352.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Diversity and evolution of ABC proteins in mycorrhiza-forming fungi

  Kovalchuk, A., Kohler, A., Martin, F. & Asiegbu, F. O., 28 Dec 2015, In: BMC Evolutionary Biology. 15, 19 p., 249.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File
• 2014

  Analysis of the Phlebiopsis gigantea Genome, Transcriptome and Secretome Provides Insight into Its Pioneer Colonization Strategies of Wood

  Hori, C., Ishida, T., Igarashi, K., Samejima, M., Suzuki, H., Master, E., Ferreira, P., Ruiz-Duenas, F. J., Held, B., Canessa, P., Larrondo, L. F., Schmoll, M., Druzhinina, I. S., Kubicek, C. P., Gaskell, J. A., Kersten, P., St John, F., Glasner, J., Sabat, G., BonDurant, S. S., & 21 othersSyed, K., Yadav, J., Mgbeahuruike, A. C., Kovalchuk, A., Asiegbu, F. O., Lackner, G., Hoffmeister, D., Rencoret, J., Gutierrez, A., Sun, H., Lindquist, E., Barry, K., Riley, R., Grigoriev, I. V., Henrissat, B., Kuees, U., Berka, R. M., Martinez, A. T., Covert, S. F., Blanchette, R. A. & Cullen, D., Dec 2014, In: PLoS Genetics. 10, 12, 20 p., 1004759.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File
• 2013

  Antimicrobial Defenses and Resistance in Forest Trees: Challenges and Perspectives in a Genomic Era

  Kovalchuk, A., Keriö, S., Oghenekaro, A., Jaber, E., Raffaello, T. & Asiegbu, F., 2013, In: Annual Review of Phytopathology. 51, p. 221-44 24 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• Comparative genomics and evolutionary analysis of hydrophobins from three species of wood-degrading fungi

  Mgbeahuruike, A. C., Kovalchuk, A. & Asiegbu, F. O., 2013, In: Mycologia. 105, 6, p. 1471-1478 8 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• Distribution and bioinformatic analysis of the cerato-platanin protein family in Dikarya

  Chen, H., Kovalchuk, A., Kerio, S. & Asiegbu, F. O., 2013, In: Mycologia. 105, 6, p. 1479-1488 10 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• Diversity and evolution of ABC proteins in basidiomycetes

  Kovalchuk, A., Lee, Y-H. & Asiegbu, F., 2013, In: Mycologia. 105 , 6, p. 1456-1470 15 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• Evolutionary analysis of hydrophobin gene family in two wood-degrading basidiomycetes, Phlebia brevispora and Heterobasidion annosum s.l.

  Mgbeahuruike, A. C., Kovalchuk, A., Chen, H., Ubhayasekera, W. & Asiegbu, F. O., 2013, In: BMC Evolutionary Biology. 13, 16 p., 240.

  Research output: Contribution to journal › Article › Scientific › peer-review