Anna Kuosmanen

  • PL 63 (Haartmaninkatu 8)

    00014

    Finland

20132019
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Personal profile

Keywords

  • 113 Computer and information sciences

International and National Collaboration Publications and projects within past five years.

Publications 2013 2019

  • 5 Article
  • 3 Conference contribution
  • 1 Doctoral Thesis

Sparse Dynamic Programming on DAGs with Small Width

Mäkinen, V., Tomescu, A. I., Kuosmanen, A., Paavilainen, T., Gagie, T. & Chikhi, R., May 2019, In : ACM Transactions on Algorithms. 15, 2, 21 p., 29.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File

Evaluating approaches to find exon chains based on long reads

Kuosmanen, A., Norri, T. & Mäkinen, V., May 2018, In : Briefings in Bioinformatics. 19, 3, p. 404-414 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File

Using Minimum Path Cover to Boost Dynamic Programming on DAGs: Co-linear Chaining Extended

Kuosmanen, A., Paavilainen, T., Gagie, T., Chikhi, R., Tomescu, A. & Mäkinen, V., Apr 2018, Research in Computational Molecular Biology : 22nd Annual International Conference, RECOMB 2018, Paris, France, April 21-24, 2018, Proceedings. Raphael, B. J. (ed.). Cham: Springer International Publishing AG, p. 105-121 17 p. (Lecture Notes in Bioinformatics; vol. 10812).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Third-generation RNA-sequencing analysis: graph alignment and transcript assembly with long reads

Kuosmanen, A., 20 Dec 2017, Helsinki: University of Helsinki. 133 p.

Research output: ThesisDoctoral ThesisCollection of Articles

Open Access

On using Longer RNA-seq Reads to Improve Transcript Prediction Accuracy

Kuosmanen, A. E., Sobih, A. A. M., Rizzi, R., Mäkinen, V. A. T. & Tomescu, A. I., 2016, Proceedings of the 9th International Joint Conference on Biomedical Engineering Systems and Technologies. Gilbert, J., Azhari, H., Ali, H., Quintão, C., Sliwa, J., Ruiz, C., Fred, A. & Gamboa, H. (eds.). SCITEPRESS Science And Technology Publications , p. 272-277 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Prizes

Google Scholarship for Students with Disabilities 2015

Anna Kuosmanen (Recipient), 27 May 2015

Prize: Prizes and awards

Activities 2014 2016

  • 7 Organisation and participation in conferences, workshops, courses, seminars

9th International Joint Conference on Biomedical Engineering Systems and Technologies

Anna Kuosmanen (Attendee)
21 Feb 201623 Feb 2016

Activity: Participating in or organising an event typesOrganisation and participation in conferences, workshops, courses, seminars

BREW2016: The 14th Bioinformatics Research and Education Workshop

Anna Kuosmanen (Member of organizing committee)
19 May 201620 May 2016

Activity: Participating in or organising an event typesOrganisation and participation in conferences, workshops, courses, seminars

Swedish Summer School in Computer Science – S3CS 2016

Anna Kuosmanen (Attendee)
26 Jun 20162 Jul 2016

Activity: Participating in or organising an event typesOrganisation and participation in conferences, workshops, courses, seminars

BREW2015: The 13th Bioinformatics Research and Education Workshop

Anna Kuosmanen (Member of organizing committee)
23 May 201524 May 2015

Activity: Participating in or organising an event typesOrganisation and participation in conferences, workshops, courses, seminars

RNA-seq data analysis workshop

Anna Kuosmanen (Attendee)
8 Jan 20149 Jan 2014

Activity: Participating in or organising an event typesOrganisation and participation in conferences, workshops, courses, seminars

Press / Media

Interview for "IT Invalidityö" magazine

Anna Kuosmanen

29/01/2016

1 media contribution

Press/Media: Press / Media