• PL 63 (Haartmaninkatu 8)

    00014

    Finland

20132019

Research output per year

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Personal profile

Fields of Science

  • 113 Computer and information sciences

International and National Collaboration Publications and projects within past five years.

Publications

  • 5 Article
  • 3 Conference contribution
  • 1 Doctoral Thesis

Sparse Dynamic Programming on DAGs with Small Width

Mäkinen, V., Tomescu, A. I., Kuosmanen, A., Paavilainen, T., Gagie, T. & Chikhi, R., May 2019, In : ACM Transactions on Algorithms. 15, 2, 21 p., 29.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File

Evaluating approaches to find exon chains based on long reads

Kuosmanen, A., Norri, T. & Mäkinen, V., May 2018, In : Briefings in Bioinformatics. 19, 3, p. 404-414 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File

Using Minimum Path Cover to Boost Dynamic Programming on DAGs: Co-linear Chaining Extended

Kuosmanen, A., Paavilainen, T., Gagie, T., Chikhi, R., Tomescu, A. & Mäkinen, V., Apr 2018, Research in Computational Molecular Biology : 22nd Annual International Conference, RECOMB 2018, Paris, France, April 21-24, 2018, Proceedings. Raphael, B. J. (ed.). Cham: Springer International Publishing AG, p. 105-121 17 p. (Lecture Notes in Bioinformatics; vol. 10812).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Open Access
File

Third-generation RNA-sequencing analysis: graph alignment and transcript assembly with long reads

Kuosmanen, A., 20 Dec 2017, Helsinki: University of Helsinki. 133 p.

Research output: ThesisDoctoral ThesisCollection of Articles

Open Access

On using Longer RNA-seq Reads to Improve Transcript Prediction Accuracy

Kuosmanen, A. E., Sobih, A. A. M., Rizzi, R., Mäkinen, V. A. T. & Tomescu, A. I., 2016, Proceedings of the 9th International Joint Conference on Biomedical Engineering Systems and Technologies. Gilbert, J., Azhari, H., Ali, H., Quintão, C., Sliwa, J., Ruiz, C., Fred, A. & Gamboa, H. (eds.). SCITEPRESS Science And Technology Publications , p. 272-277 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Prizes

Google Scholarship for Students with Disabilities 2015

Anna Kuosmanen (Recipient), 27 May 2015

Prize: Prizes and awards

Activities

  • 7 Organisation and participation in conferences, workshops, courses, seminars

Swedish Summer School in Computer Science – S3CS 2016

Anna Kuosmanen (Attendee)
26 Jun 20162 Jul 2016

Activity: Participating in or organising an event typesOrganisation and participation in conferences, workshops, courses, seminars

BREW2016: The 14th Bioinformatics Research and Education Workshop

Anna Kuosmanen (Member of organizing committee)
19 May 201620 May 2016

Activity: Participating in or organising an event typesOrganisation and participation in conferences, workshops, courses, seminars

9th International Joint Conference on Biomedical Engineering Systems and Technologies

Anna Kuosmanen (Attendee)
21 Feb 201623 Feb 2016

Activity: Participating in or organising an event typesOrganisation and participation in conferences, workshops, courses, seminars

BREW2015: The 13th Bioinformatics Research and Education Workshop

Anna Kuosmanen (Member of organizing committee)
23 May 201524 May 2015

Activity: Participating in or organising an event typesOrganisation and participation in conferences, workshops, courses, seminars

Lipari School on BioInformatics and Computational Biology - Computational Genomics and Personalized Medicine

Anna Kuosmanen (Attendee)
13 Jul 201419 Jul 2014

Activity: Participating in or organising an event typesOrganisation and participation in conferences, workshops, courses, seminars

Press / Media

Interview for "IT Invalidityö" magazine

Anna Kuosmanen

29/01/2016

1 Media contribution

Press/Media: Press / Media