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Publications 2013 2019

  • 5 Article
  • 3 Conference contribution
  • 1 Doctoral Thesis
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Conference contribution
2018

Using Minimum Path Cover to Boost Dynamic Programming on DAGs: Co-linear Chaining Extended

Kuosmanen, A., Paavilainen, T., Gagie, T., Chikhi, R., Tomescu, A. & Mäkinen, V., Apr 2018, Research in Computational Molecular Biology : 22nd Annual International Conference, RECOMB 2018, Paris, France, April 21-24, 2018, Proceedings. Raphael, B. J. (ed.). Cham: Springer International Publishing AG, p. 105-121 17 p. (Lecture Notes in Bioinformatics; vol. 10812).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

2016

On using Longer RNA-seq Reads to Improve Transcript Prediction Accuracy

Kuosmanen, A. E., Sobih, A. A. M., Rizzi, R., Mäkinen, V. A. T. & Tomescu, A. I., 2016, Proceedings of the 9th International Joint Conference on Biomedical Engineering Systems and Technologies. Gilbert, J., Azhari, H., Ali, H., Quintão, C., Sliwa, J., Ruiz, C., Fred, A. & Gamboa, H. (eds.). SCITEPRESS Science And Technology Publications , p. 272-277 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

2013

A Novel Combinatorial Method for Estimating Transcript Expression with RNA-Seq: Bounding the Number of Paths

Tomescu, A. I., Kuosmanen, A., Rizzi, R. & Mäkinen, V., 2013, Algorithms in Bioinformatics: 13th International Workshop, WABI 2013, Sophia Antipolis, France, September 2-4, 2013. Proceedings. Darling, A. & Stoye, J. (eds.). Springer-Verlag, p. 85-98 (Lecture Notes in Computer Science; no. 8126).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review