Eero Salli

Publications

Research output per year 1996 2017 2022 2024

• 37 Article
• 6 Conference contribution
• 3 Chapter
• 3 Conference article
• 2 More
  • 1 Review Article
  • 1 Doctoral Thesis

Research output per year

Research output per year

Search results

• 2024

  Cerebral Small Vessel Disease Is Associated With Smaller Brain Volumes in Adults With Type 1 Diabetes

  Claesson, T.-B., Putaala, J., Shams, S., Salli, E., Gordin, D., Mutter, S., Tatlisumak, T., Groop, P.-H., Martola, J. & Thorn, L., 2024, In: Journal of diabetes research. 2024, 1, 8 p., 5525213.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Quantifying the calcification of abdominal aorta and major side branches with deep learning

  Halkoaho, J. T. E., Niiranen, O., Salli, E., Kaseva, T., Savolainen, S., Kangasniemi, M. & Hakovirta, H., May 2024, In: Clinical Radiology. 79, 5, p. e665-e674 10 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File
• 2023

  Deep learning-aided extraction of outer aortic surface from CT angiography scans of patients with Stanford type B aortic dissection

  Kesävuori, R., Kaseva, T., Salli, E., Raivio, P., Savolainen, S. & Kangasniemi, M., 29 Jun 2023, In: European radiology experimental. 7, 1, 13 p., 35.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File
• 2022

  Automatic CT Angiography Lesion Segmentation Compared to CT Perfusion in Ischemic Stroke Detection: a Feasibility Study

  Mäkelä, T., Öman, O., Hokkinen, L. M. I., Wilppu, U., Salli, E., Savolainen, S. & Kangasniemi, M., Jun 2022, In: Journal of Digital Imaging. 35, 3, p. 551-563 13 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Automatic detection of Crohn's disease using quantified motility in magnetic resonance enterography: initial experiences

  Arkko, A., Kaseva, T., Salli, E., Mäkelä, T., Savolainen, S. & Kangasniemi, M., Feb 2022, In: Clinical Radiology. 77, 2, p. 96-103 8 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Brain volumes and abnormalities in adults born preterm at very low birth weight

  Kuula, J., Martola, J., Hakkarainen, A., Räikkönen, K., Savolainen, S., Salli, E., Hovi, P., Björkqvist, J., Kajantie, E. & Lundbom, N., Jul 2022, In: The Journal of Pediatrics. 246, p. 48-+ 15 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Detection of Aspartylglucosaminuria Patients from Magnetic Resonance Images by a Machine-Learning-Based Approach

  Ruohola, A., Salli, E., Roine, T., Tokola, A., Laine, M., Tikkanen, R., Savolainen, S. & Autti, T., Nov 2022, In: Brain Sciences. 12, 11, 12 p., 1522.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

• Marker-controlled Watershed with Deep Edge Emphasis and Optimized H-minima Transform for Automatic Segmentation of Densely Cultivated 3D Cell Nuclei

  Kaseva, T., Omidali, B., Hippeläinen, E., Mäkelä, T., Wilppu, U., Sofiev, A., Merivaara, A., Yliperttula, M., Savolainen, S. & Salli, E., 21 Jul 2022, In: BMC Bioinformatics. 23, 1, 19 p., 289.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Motion modeling from 4D MR images of liver simulating phantom

  Kavaluus, H., Koivula, L., Salli, E., Seppälä, T., Saarilahti, K. & Tenhunen, M., Jul 2022, In: Journal of applied clinical medical physics. 23, 7, 11 p., 13611.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Stiffness-controlled hydrogels for 3D cell culture models

  Merivaara, A., Koivunotko, E., Manninen, K., Kaseva, T., Monola, J., Salli, E., Koivuniemi, R., Savolainen, S., Valkonen, S. & Yliperttula, M., 2022, In: Polymers. 14, 24, 5530.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access
• 2020

  Comparison of Manual Cross-Sectional Measurements and Automatic Volumetry of the Corpus Callosum, and Their Clinical Impact: A Study on Type 1 Diabetes and Healthy Controls

  Claesson, T.-B., Putaala, J., Shams, S., Salli, E., Gordin, D., Liebkind, R., Forsblom, C., Summanen, P. A., Tatlisumak, T., Groop, P.-H., Martola, J. & Thorn, L. M., 29 Jan 2020, In: Frontiers in neurology. 11, 8 p., 27.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Inter- and intra-scanner variations in four magnetic resonance imaging image quality parameters

  Peltonen, J. I., Mäkelä, T., Lehmonen, L., Sofiev, A. & Salli, E., 4 Dec 2020, In: Journal of Medical Imaging. 7, 6, 17 p., 065501.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Retrospective four-dimensional magnetic resonance imaging of liver: Method development

  Kavaluus, H., Seppälä, T., Koivula, L., Salli, E., Collan, J., Saarilahti, K. & Tenhunen, M., Dec 2020, In: Journal of applied clinical medical physics. 21, 12, p. 304-313 10 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File
• 2019

  3D Convolutional Neural Network Applied to CT Angiography in the Detection of an Acute Ischemic Stroke

  Öman, O., Mäkelä, T., Salli, E., Savolainen, S. & Kangasniemi, M., 2019, In: European radiology experimental. 3, 11 p., 8.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File
• 2018

  MRI quality assurance based on 3D FLAIR brain images

  Peltonen, J. I., Mäkelä, T. & Salli, E., Dec 2018, In: Magnetic Resonance Materials in Physics, Biology and Medicine.. 31, 6, p. 689–699 11 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File
• 2017

  An Automatic Image Processing Workflow for Daily Magnetic Resonance Imaging Quality Assurance

  Peltonen, J. I., Mäkelä, T., Sofiev, A. & Salli, E., Apr 2017, In: Journal of Digital Imaging. 30, 2, p. 163-171 9 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

• ISLES 2015 - A public evaluation benchmark for ischemic stroke lesion segmentation from multispectral MRI

  Maier, O., Menze, B. H., von der Gablentz, J., Hani, L., Heinrich, M. P., Liebrand, M., Winzeck, S., Basit, A., Bentley, P., Chen, L., Christiaens, D., Dutil, F., Egger, K., Feng, C., Glocker, B., Götz, M., Haeck, T., Halme, H.-L., Havaei, M. & Iftekharuddin, K. M. & 29 others, Jodoin, P.-M., Kamnitsas, K., Kellner, E., Korvenoja, A., Larochelle, H., Ledig, C., Lee, J.-H., Maes, F., Mahmood, Q., Maier-Hein, K. H., McKinley, R., Muschelli, J., Pal, C., Pei, L., Rangarajan, J. R., Reza, S. M. S., Robben, D., Rueckert, D., Salli, E., Suetens, P., Wang, C.-W., Wilms, M., Kirschke, J. S., Kramer, U. M., Munte, T. F., Schramm, P., Wiest, R., Handels, H. & Reyes, M., 2017, In: Medical Image Analysis. 35, p. 250-269 20 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• Multicellular dosimetric chain for molecular radiotherapy exemplified with dose simulations on 3D cell spheroids

  Reijonen, V., Kanninen, L. K., Hippeläinen, E., Lou, Y.-R., Salli, E., Sofiev, A., Malinen, M., Paasonen, T., Yliperttula, M., Kuronen, A. & Savolainen, S., Aug 2017, In: Physica Medica. 40, p. 72-78 7 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File

• White Matter Microstructure and Subcortical Gray Matter Structure Volumes in Aspartylglucosaminuria; a 5-Year Follow-up Brain MRI Study of an Adolescent with Aspartylglucosaminuria and His Healthy Twin Brother

  Tokola, A., Brandstack, N., Hakkarainen, A., Salli, E., Åberg, L. & Autti, T., 2017, In: Journal of Inherited Metabolic Disease Reports. 35, p. 105-115 11 p.

  Research output: Contribution to journal › Article › Scientific › peer-review
• 2015

  Feasibility of MRI-based reference images for image-guided radiotherapy of the pelvis with either cone-beam computed tomography or planar localization images

  Korhonen, J., Kapanen, M., Sonke, J.-J., Wee, L., Salli, E., Keyrilainen, J., Seppälä, T. & Tenhunen, M., Jun 2015, In: Acta Oncologica. 54, 6, p. 889-U190 10 p.

  Research output: Contribution to journal › Article › Scientific › peer-review
• 2014

  Hippocampal Volumes in Juvenile Neuronal Ceroid Lipofuscinosis: A Longitudinal Magnetic Resonance Imaging Study

  Tokola, A. M., Salli, E. K., Aberg, L. E. & Autti, T. H., Feb 2014, In: Pediatric Neurology. 50, 2, p. 158-163 6 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• Structural changes induced by daily music listening in the recovering brain after middle cerebral artery stroke: a voxel-based morphometry study

  Särkämö, T. T., Ripollés, P., Vepsäläinen, H. R., Autti, T. H., Silvennoinen, H. M., Salli, E., Laitinen, S., Forsblom, A., Soinila, S. & Rodríguez-Fornells, A., 17 Apr 2014, In: Frontiers in Human Neuroscience . 8, 16 p., 245.

  Research output: Contribution to journal › Article › Scientific › peer-review

  Open Access

  File
• 2013

  Applicability of nTMS in locating the motor cortical representation areas in patients with epilepsy

  Vitikainen, A.-M., Salli, E., Lioumis, P., Mäkelä, J. & Metsähonkala, L., Mar 2013, In: Acta Neurochirurgica. 155, 3, p. 507-518 12 p.

  Research output: Contribution to journal › Article › Scientific › peer-review
• 2012

  Organ dose calculation in CT based on scout image data and automatic image registration

  Kortesniemi, M., Salli, E. & Seuri, R., Oct 2012, In: Acta Radiologica. 53, 8, p. 908-913 6 p.

  Research output: Contribution to journal › Article › Scientific › peer-review
• 2009

  Combined use of non-invasive techniques for improved functional localization for a selected group of epilepsy surgery candidates

  Vitikainen, A.-M., Lioumis, P., Paetau, R., Salli, E., Komssi, S., Metsähonkala, L., Paetau, A., Kic̆ić, D., Blomstedt, G., Valanne, L., Mäkelä, J. P. T. & Gaily, E., 2009, In: NeuroImage. 45, 2, p. 342-348 7 p.

  Research output: Contribution to journal › Article › Scientific › peer-review
• 2008

  Automatic image quality quantification and mapping with an edge-preserving mask-filtering algorithm

  Kortesniemi, M., Schenkel, Y. & Salli, E., 2008, In: Acta Radiologica. 49, 1, p. 45-55 11 p.

  Research output: Contribution to journal › Article › Scientific › peer-review
• 2007

  Boron neutron capture therapy in the treatment of locally recurred head and neck cancer

  Kankaanranta, L., Seppälä, T., Koivunoro, H., Saarilahti, K., Atula, T., Collan, J., Salli, E., Kortesniemi, M., Uusi-Simola, J., Mäkitie, A., Seppänen, M., Minn, H., Kotiluoto, P., Auterinen, I., Savolainen, S., Kouri, M. & Joensuu, H., 2007, In: International Journal of Radiation: Oncology - Biology - Physics. 69, 2, p. 475-482 8 p.

  Research output: Contribution to journal › Article › Scientific › peer-review
• 2006

  A cluster mass permutation test with contextual enhancement for fMRI activation detection

  Tillikainen, L., Salli, E., Korvenoja, A. & Aronen, H., 2006, In: NeuroImage. 32, 2, p. 654-664 11 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• Sensorimotor cortex localization: comparison of magnetoencephalography, functional MR imaging, and intraoperative cortical mapping

  Korvenoja, A., Kirveskari, E., Aronen, H. J., Avikainen, S., Brander, A., Huttunen, J., Ilmoniemi, R., Jääskeläinen, J., Kovala, T., Mäkelä, J. P. T., Salli, E. & Seppä, M., 2006, In: Radiology. 241, 1, p. 213-222 10 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• 2004

  Kuvankäsittely radiologiassa

  Salli, E. & Kortesniemi, M., 2004, In: Radiografia.. 2, p. 16-19 4 p.

  Research output: Contribution to journal › Article › Professional

• 2001

  Contextual clustering for analysis of functional MRI data

  Salli, E., Aronen, H. J., Savolainen, S., Korvenoja, A. & Visa, A., 2001, In: IEEE Transactions on Medical Imaging. 20, 5, p. 403-414 12 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• Reproducibility of fMRI: effect of the use of contextual information

  Salli, E., Korvenoja, A., Visa, A., Katila, T. & Aronen, H. J., 2001, In: NeuroImage. 13, p. 459-471 13 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• 1999

  Activation of multiple cortical areas in response to somatosensory stimulation: Combined magnetoencephalographic and functional magnetic resonance imaging

  Korvenoja, A., Huttunen, J., Salli, E., Pohjonen, H., Martinkauppi, S., Palva, L. M., Lauronen, L., Virtanen, J., Ilmoniemi, R. J. & Aronen, H. J., 1999, In: Human Brain Mapping. 8, p. 13-27 15 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• Somatosensory evoked magnetic fields from the primary somatosensory cortex (SI) in acute stroke

  Wikström, H., Roine, R. O., Salonen, O., Buch Lund, K., Salli, E., Ilmoniemi, R., Aronen, H. & Huttunen, J., 1999, In: Clinical Neurophysiology. 110, 5, p. 916-923 8 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• 1998

  Distribution of cortical activation during visuospatial n-back tasks as revealed by functional magnetic resonance imaging

  Carlson, S., Martinkauppi, S., Rämä, P., Salli, E., Korvenoja, A. & Aronen, H. J., 1998, In: Cerebral Cortex. 8, p. 743-752 10 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• Reversal of cerebral asymmetry in schizophrenia measured with magnetoencephalography

  Tiihonen, J., Katila, H., Pekkonen, E., Jaaskelainen, I. P., Huotilainen, M., Aronen, H., Ilmoniemi, R. J., Rasanen, P., Virtanen, J., Salli, E. & Karhu, J., 1998, In: Schizophrenia Research. 30, 3, p. 209-219 11 p.

  Research output: Contribution to journal › Article › Scientific › peer-review

• 1996

  Registration and display of brain SPECT and MRI using external markers

  Pohjonen, H., Nikkinen, P., Sipilä, O., Launes, J., Salli, E., Karp, P., Ylä-Jääski, J., Katila, T. & Liewendahl, K., 1996, In: Neuroradiology. 38, p. 108-14

  Research output: Contribution to journal › Article › Scientific › peer-review