Research output per year
Research output per year
Personal profile
Fields of Science
- 113 Computer and information sciences
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Application of Self Supervised Vision Transformers for Multiplexed Microscopy Images and Its Challenges
Atarsaikhan, G., Mogollon Figueroa, I., Välimäki, K., Pellinen, T., Mirtti, T. & Paavolainen, L., 16 Dec 2023.Research output: Conference materials › Paper › peer-review
Open AccessFile -
Deep attentive time warping
Matsuo, S., Wu, X., Atarsaikhan, G., Kimura, A., Kashino, K., Iwana, B. K. & Uchida, S., Apr 2023, In: Pattern Recognition. 136, 13 p., 109201.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Typographic Design Generation Using Neural Style Transfer
Atarsaikhan, G., 22 Mar 2022Research output: Thesis › Doctoral Thesis › Monograph
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Attention to Warp: Deep Metric Learning for Multivariate Time Series
Matsuo, S., Wu, X., Atarsaikhan, G., Kimura, A., Kashino, K., Iwana, B. K. & Uchida, S., 2021, Document Analysis and Recognition - ICDAR 2021 - 16th International Conference, Proceedings. Lladós, J., Lopresti, D. & Uchida, S. (eds.). Springer Science and Business Media Deutschland GmbH, p. 350-365 16 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12823 LNCS).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
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Guided neural style transfer for shape stylization
Atarsaikhan, G., Iwana, B. K. & Uchida, S., Jun 2020, In: PLoS One. 15, 6, 23 p., e0233489.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile
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Uncovering patterns in cancer cells with visual representation learning
Paavolainen, L. (Project manager), Atarsaikhan, G. (Participant) & Mogollon Figueroa, I. (Participant)
01/09/2024 → 31/08/2026
Project: Research Council of Finland: Academy Research Fellow's research expenses
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PanCanPro: Decoding pan-cancer tumor microenvironment with integrative single-cell spatial profiling
Paavolainen, L. (Project manager) & Atarsaikhan, G. (Participant)
01/09/2024 → 31/08/2028
Project: Research Council of Finland: Academy Project
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iCAN - Digital precision cancer medicine for discoveries and improved treatments
Mäkelä, T. (Project manager), Adhikari, S. (Participant), Aldahdooh, J. M. F. (Participant), Ariotta, V. (Participant), Arjama, M. A. (Participant), Atarsaikhan, G. (Participant), Bao, J. (Participant), Barreiro, K. (Participant), Bhalke, M. S. (Participant), Bollepalli, S. (Participant), Brandt, J. A. J. (Participant), Chernenko, A. (Participant), Dashi, G. (Participant), Eloranta, K. (Participant), Eriksson, M. R. (Participant), Fey, E. (Participant), Gerber, L. J. (Participant), Grönholm, M. (Participant), Hannula, S. A. (Participant), Heistman, V. (Participant), Henriksson, M. E. J. (Participant), Hiitola, E. T. J. (Participant), Huttunen, A. T. (Participant), Hyyppä, S. P. P. (Participant), Högel-Starck, C. S. P. (Participant), Ianevski, A. (Participant), Ikonen, N. (Participant), Jansouz, S. (Participant), Jha, S. (Participant), Junquera Mencía, A. (Participant), Kampanellou, E. (Participant), Karabayev, D. (Participant), Karhemo, P.-R. (Participant), Kekkonen, J. (Participant), Kolikova, Y. (Participant), Krami Senhaji, O. (Participant), Kuisma-van der Linden, M. S. (Participant), Kuosmanen, A. (Participant), Kurki, V. (Participant), Kuusela, S. (Participant), Kücükel, H. (Participant), Langohr, L. (Participant), Le Joncour, V. (Participant), Lehto, T.-P. (Participant), Leivonen, S.-K. (Participant), Liljeström, M. (Participant), Lindfors, I. S. (Participant), Lindgren, H. (Participant), Luck, T. J. (Participant), Lähdeniemi, I. A. K. (Participant), Maarala, A. I. (Participant), Maljanen, K. J. (Participant), Marchi, G. (Participant), Martikainen, E. M. (Participant), Meriranta, L. (Participant), Metsäranta, N. A. C. (Participant), Miihkinen, M. S. (Participant), Nader, K. M. (Participant), Nagaraj, A. (Participant), Nguyen, M. (Participant), Niemeyer, F. (Participant), Niemiec, I. (Participant), Nylén, M. M. (Participant), Palin, K. (Participant), Palva, A. (Participant), Parsons, A. O. (Participant), Perez Villatoro, F. R. (Participant), Pietiäinen, V. (Participant), Pirinen, I. E. (Participant), Pirttikoski, A. A. (Participant), Pitko, I. M. (Participant), Puhka, M. (Participant), Quintero, I. B. (Participant), Rachidi, S. E. (Participant), Rajalaakso, M. T. (Participant), Rodosthenous, R. (Participant), Saad, J. (Participant), Sanjaya, P. (Participant), Seppälä, T. T. (Participant), Seref Vujaklija, C. (Participant), Shah, S. (Participant), Sorri, S. P. (Participant), Suni, V. (Participant), Suutala, A. (Participant), Suvela, M. (Participant), Udayani, J. E. (Participant), Verkasalo, H. M. (Participant), Vilkkavaara Cancocak, Y. (Participant), Vähärautio, A. (Participant), Vänttinen, I. M. (Participant), Västrik, I. (Participant), Väänänen, J. (Participant) & Wang, W. (Participant)
Suomen Akatemia Projektilaskutus, Academy of Finland
01/09/2022 → 31/12/2026
Project: Research Council of Finland: Finnish Flagship Programme
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Uncovering patterns in cancer cells with visual representation learning
Paavolainen, L. (Project manager), Atarsaikhan, G. (Participant), Mogollon Figueroa, I. (Participant) & Sanian, M. V. (Participant)
01/09/2021 → 31/08/2026
Project: Research project
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Pan-cancer tumor microenvironment exploration with vision transformers
Paavolainen, L. (Project manager), Atarsaikhan, G. (Participant), Mogollon Figueroa, I. (Participant) & Mogollon Figueroa, I. (Participant)
Syöpäsäätiö sr Cancerstiftelsen sr
01/01/2023 → 31/12/2024
Project: Foundations (Private Foundations, Non-Profit Foundations, Charitable Trusts)
Activities
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iCAN retreat 2024
Kremneva, E. (Chair of organizing committee), Kolikova, Y. (Member of organizing committee), Laakkonen, P. (Member of organizing committee), Vanharanta, S. (Member of organizing committee), Varjosalo, M. (Member of organizing committee), Wahl, H. (Member of organizing committee), Sankkila-Forsström, S. S. (Member of organizing committee), Duàn, H. (Speaker: Presenter), Karhemo, P.-R. (Speaker: Presenter), Miihkinen, M. S. (Speaker: Presenter), Liljeström, M. (Member of organizing committee), Pietiäinen, V. (Speaker: Presenter), Ganesan, A. (Poster Presentation), Saad, J. (Poster Presentation), Holmström, S. (Poster Presentation), Brodkin, J. H. (Poster Presentation), Mendoza Ortiz, E. D. (Poster Presentation), Sundaresan, S. (Poster Presentation), Chiaro, J. (Poster Presentation), Giannoula, Y. (Poster Presentation), Portaankorva, A. M. (Speaker: Presenter), Mustjoki, S. (Speaker: Presenter), Mäkelä, T. (Speaker: Presenter), Atarsaikhan, G. (Poster Presentation), Filppu, P. (Poster Presentation), Russo, S. (Poster Presentation), Pikkusaari, S. K. (Poster Presentation), Ryzhenkov, A. (Poster Presentation), Newman, R. G. D. (Speaker: Presenter), Arffman, M. E. (Speaker: Presenter), Kumari, R. (Poster Presentation), Leppiniemi, S. A. (Poster Presentation), Sanjaya, P. (Poster Presentation), Feodoroff, M. J. (Poster Presentation), Karabayev, D. (Poster Presentation), Jäntti, J. M. (Poster Presentation), Wong Ramirez, J. R. C. (Poster Presentation), Kalander, K. O. (Poster Presentation), Bouhlal, J. O. V. (Speaker: Presenter), Kuusela, S. (Speaker: Presenter), Fey, E. (Speaker: Presenter), Krami Senhaji, O. (Poster Presentation), Moradi, N. (Poster Presentation), Polso, M. M. M. (Poster Presentation), Antignani, G. (Poster Presentation), Maljanen, K. J. (Poster Presentation), Langohr, L. (Poster Presentation), Anil, A. (Poster Presentation), Smolander, P. J. (Poster Presentation), Feodoroff, M. J. (Poster Presentation), Alsaed, B. (Poster Presentation), Mogollon Figueroa, I. (Poster Presentation), Ryzhenkov, A. (Poster Presentation) & Henriksson, M. E. J. (Poster Presentation)
3 Oct 2024Activity: Participating in or organising an event types › Organisation and participation in conferences, workshops, courses, seminars
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AI-Driven Deep Image-Based Profiling of Pan-Cancer Tumor Microenvironment
Atarsaikhan, G. (Speaker)
12 Sept 2023Activity: Talk or presentation types › Oral presentation
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2023 MAQC SOCIETY 6TH ANNUAL MEETING
Atarsaikhan, G. (Speaker: Presenter)
11 Sept 2023 → 12 Sept 2023Activity: Participating in or organising an event types › Organisation and participation in conferences, workshops, courses, seminars
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NeurIPS 2023 Workshop: Self-Supervised Learning - Theory and Practice
Atarsaikhan, G. (Poster Presentation)
16 Dec 2023Activity: Participating in or organising an event types › Organisation and participation in conferences, workshops, courses, seminars
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Cytodata 2023 and Hackathon
Atarsaikhan, G. (Attendee)
23 Oct 2023 → 26 Oct 2023Activity: Participating in or organising an event types › Organisation and participation in conferences, workshops, courses, seminars