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Heikki Mannila

19942015

Research output per year

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Publications

1994

Efficient Algorithms for Discovering Association Rules

Mannila, H., Toivonen, H. & Verkamo, A. I., Jul 1994, Knowledge Discovery in Databases, Papers from the 1994 AAAI Workshop (KDD'94). Fayyad, U. M. & Uthurusamy, R. (eds.). Seattle, Washington, USA: AAAI Press, p. 181-192 12 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Finding interesting rules from large sets of discovered association rules

Klemettinen, M., Mannila, H., Ronkainen, P., Toivonen, H. & Verkamo, A. I., 1994, Proceedings of the Third International Conference on Information and Knowledge Management. Adam, N. R., Bhargava, B. K. & Yesha, Y. (eds.). p. 401-407

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Open Access
1995

A Perspective on Databases and Data Mining

Holsheimer, M., Kersten, M., Mannila, H. & Toivonen, H., Aug 1995, Proceedings of the Fourth International Conference on Knowledge Discovery and Data Mining (KDD'98). Fayyad, U. M. & Uthurusamy, R. (eds.). Montreal, Canada: AAAI Press, p. 150-155 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Discovering Frequent Episodes in Sequences

Mannila, H., Toivonen, H. & Verkamo, A. I., Aug 1995, Proceedings of the First International Conference on Knowledge Discovery and Data Mining (KDD'95). Fayyad, U. M. & Uthurusamy, R. (eds.). Montreal, Canada: AAAI Press, p. 210-215 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Pruning and Grouping of Discovered Association Rules

Toivonen, H., Klemettinen, M., Ronkainen, P., Hätönen, K. & Mannila, H., 1995, Workshop Notes of ECML Workshop on Statistics, Machine Learning, and Knowledge Discovery in Databases. p. 47-52

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Open Access
1996

BASS: Bayesian analyzer of event sequences

Arjas, E., Mannila, H., Salmenkivi, M., Suramo, R. & Toivonen, H., Aug 1996, Proceedings in Computational Statistics (COMPSTAT'96). Prat, A. (ed.). Barcelona, Spain: Physica verlag, p. 199-204 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Constructing tailored SGML documents

Ahonen-Myka, H., Heikkinen, B., Heinonen, O., Jaakkola, J., Kilpeläinen, P., Lindén, G. & Mannila, H., 1996, Proceedings of SGML Finland '96. Saarela, J. (ed.). SGML Users' Group Finland, p. 106-116

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientific

Discovering generalized episodes using minimal occurrences

Mannila, H. & Toivonen, H., Aug 1996, Proceedings of the Second International Conference on Knowledge Discovery and Data Mining (KDD'96). Simoudis, E., Han, J. & Fayyad, U. (eds.). Portland, Oregon, USA: AAAI Press, p. 146-151 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Intelligent Assembly of Structured Documents

Ahonen-Myka, H., Heikkinen, B., Heinonen, O., Jaakkola, J., Kilpeläinen, P., Lindén, G. & Mannila, H., 1996, University of Helsinki, Department of Computer Science. (Series of Publications C; no. C-1996-40)

Research output: Book/ReportCommissioned reportProfessional

Knowledge discovery from telecommunication network alarm databases

Hatonen, K., Klemettinen, M., Mannila, H., Ronkainen, P. & Toivonen, H., 1996, Proceedings of the International Conference on Data Engineering 1996 (ICDE'96). p. 115-122 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Multiple uses of frequent sets and condensed representations

Mannila, H. & Toivonen, H., Aug 1996, Proceedings of the Second International Conference on Knowledge Discovery and Data Mining (KDD'96). Simoudis, E., Han, J. & Fayyad, U. (eds.). Portland, Oregon: AAAI Press, p. 189-194 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

On an algorithm for finding all interesting sentences

Mannila, H. & Toivonen, H., Apr 1996, Cybernetics and Systems, Volume II, The Thirteenth European Meeting on Cybernetics and Systems Research. Vienna, Austria: Austrian Society for Cybernetic Studies, p. 973-978 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

TASA: Telecommunication alarm sequence analyzer, or "How to enjoy faults in your network"

Hätönen, K., Klemettinen, M., Mannila, H., Ronkainen, P. & Toivonen, H., Apr 1996, Proceedings of the 1996 IEEE Network Operations and Management Symposium (NOMS'96). Kyoto, Japan: IEEE Computer Society, p. 520-529 10 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

TASA: Telecommunications alarm sequence analyzer

Hatonen, K., Klemettinen, M., Mannila, H., Ronkainen, P. & Toivonen, H., 1996, NOMS'96 - 1996 IEEE Network Operations and Management Symposium, vols. 1-4. p. 520-529 10 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

1997

A Data Mining Methodology and Its Application to Semi-Automatic Knowledge Acquisition

Klemettinen, M., Mannila, H. & Toivonen, H., Sep 1997, Proceedings of the 8th International Workshop on Database and Expert Systems Applications (DEXA'97). Wagner, R. R. (ed.). Toulouse, France: IEEE Computer Society, p. 670-677 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Data mining, hypergraph transversals, and machine learning

Gunopulos, D., Khardon, R., Mannila, H. & Toivonen, H., 1 May 1997, Proceedings of the Sixteenth ACM SIGACT-SIGMOD-SIGART Symposium on Principles of Database and Knowledgebase Systems (PODS'97). Tucson, Arizona: ACM, p. 209-216 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Discovery of Frequent Episodes in Event Sequences

Mannila, H., Toivonen, H. & Verkamo, A. I., Nov 1997, In : Data Mining and Knowledge Discovery. 1, 3, p. 259-289 31 p.

Research output: Contribution to journalArticleScientificpeer-review

Levelwise search and borders of theories in knowledge discovery

Mannila, H. & Toivonen, H., Nov 1997, In : Data Mining and Knowledge Discovery. 1, 3, p. 241-258 18 p.

Research output: Contribution to journalArticleScientificpeer-review

Similarity of event sequences

Mannila, H. & Ronkainen, P., 1997, Proceedings of the Fourth International Workshop on Temporal Representation and Reasoning (TIME'97). p. 136-139 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

1998

Bassist - a tool for MCMC simulation of statistical models

Toivonen, H., Mannila, H., Salmenkivi, M. & Laakso, K-P., Apr 1998, Proceedings of the Eurosim '98 Simulation Congress. Juslin, K. (ed.). Helsinki, Finland: The Federation of European Simulation Societies, p. 590-595 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Similarity of Attributes by External Probes

Das, G., Mannila, H. & Ronkainen, P., 1998, Proceedings of the Fourth International Conference on Knowledge Discovery and Data Mining. p. 23-29

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Open Access
1999

A genomewide screen for schizophrenia genes in an isolated Finnish subpopulation, suggesting multiple susceptibility loci

Hovatta, I., Varilo, T., Suvisaari, J., Terwilliger, J. D., Ollikainen, V., Arajarvi, R., Juvonen, H., Kokko-Sahin, M. L., Vaisanen, L., Mannila, H., Lonnqvist, J. & Palotie, L., 1999, In : American Journal of Human Genetics. 65, p. 1114-1124 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Interactive exploration of interesting findings in the Telecommunication Network Alarm Sequence Analyzer TASA

Klemettinen, M., Mannila, H. & Toivonen, H., Jun 1999, In : Information and Software Technology. 41, 9, p. 557-567 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Rule Discovery in Telecommunication Alarm Data

Klemettinen, M., Mannila, H. & Toivonen, H., Dec 1999, In : Journal of Network and Systems Management. 7, 4, p. 395 - 423

Research output: Contribution to journalArticleScientificpeer-review

Similarity between Event Types in Sequences

Mannila, H. & Ronkainen, P., 1999, Proceedings of the First International Conference on Data Warehousing and Knowledge Discovery. p. 271-280 (Lecture Notes in Computer Science; vol. 1676).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Open Access

Specifying and Simulating Complex Models Using Bassist

Toivonen, H., Mannila, H., Salmenkivi, M. & Laakso, K-P., 1999, In : Real Academia Gallega de Ciencias. Revista. 93, 3, p. 375-380 6 p.

Research output: Contribution to journalArticleScientificpeer-review

2000

Association study of the chromosomal region containing the FCER2 gene suggests it has a regulatory role in atopic disorders

Laitinen, T., Ollikainen, V., Lazaro, C., Kauppi, P., de Cid, R., Anto, J. M., Estivill, X., Lokki, H., Mannila, H., Laitinen, L. A. & Kere, J., 2000, In : American Journal of Respiratory and Critical Care Medicine. 2000, 161, p. 700-706 7 p.

Research output: Contribution to journalArticleScientificpeer-review

Data mining applied to linkage disequilibrium mapping

Toivonen, H. T. T., Onkamo, P., Vasko, K., Ollikainen, V., Sevon, P., Mannila, H., Herr, M. & Kere, J., 2000, In : American Journal of Human Genetics. 2000, 67, p. 133-145 13 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File

Mining the associations between genetic marker data and a phenotype including covariates

Sevon, P., Ollikainen, V., Onkamo, P., Toivonen, H. TT., Mannila, H. & Kere, J., Oct 2000, Genetic Analysis Workshop 12 (GAW12). San Antonio, TX

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

The IL9R region contribution in asthma is supported by genetic association in an isolated population

Kauppi, P., Laitinen, T., Ollikainen, V., Mannila, H., Laitinen, L. A. & Kere, J., 2000, In : European Journal of Human Genetics. 2000, 8, p. 788-792 5 p.

Research output: Contribution to journalArticleScientificpeer-review

2001

Association analysis by data mining tools

Onkamo, P., Sevon, P., Ollikainen, V., Toivonen, H. TT., Mannila, H. & Kere, J., Oct 2001, In : American Journal of Human Genetics. 69, 4, Suppl. 1, p. 1320 1 p.

Research output: Contribution to journalArticleScientificpeer-review

Mining associations between genetic markers, phenotypes, and covariates

Sevon, P., Ollikainen, V., Onkamo, P., Toivonen, H. T. T., Mannila, H. & Kere, J., 2001, In : Genetic Epidemiology. 2001, 21, p. S588-S593 6 p.

Research output: Contribution to journalArticleScientificpeer-review

Time series segmentation for context recognition in mobile devices

Himberg, J., Korpiaho, K., Mannila, H., Tikanmäki, J. & Toivonen, H. T. T., Nov 2001, The 2001 IEEE International Conference on Data Mining (ICDM'01). San Jose, California: IEEE Computer Society, p. 203-210 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

2002

Association analysis for quantitative traits by data mining: QHPM

Onkamo, P., Ollikainen, V., Sevon, P., Toivonen, H. T. T., Mannila, H. & Kere, J., 2002, In : Annals of Human Genetics. 2002, 66, p. 419-429 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Genome segmentation using piecewise constant intensity models and reversible jump MCMC

Salmenkivi, M., Kere, J. & Mannila, H., 2002, In : Bioinformatics Trends. 2002, 18, p. S211-S218 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Investigatory and analytical approaches to differential gene expression profiling in mantle cell lymphoma

Zhu, Y., Hollmen, J., Raty, R., Aalto, Y., Nagy, B., Elonen, E., Kere, J., Mannila, H., Franssila, K. & Knuutila, S., 2002, In : British Journal of Haematology. 2002, 119, p. 905-915 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Long-range control of expression in yeast

Mannila, H., Patrikainen, A., Seppanen, J. K. & Kere, J., 2002, In : Bioinformatics Trends. 2002, 18, p. 482-483 2 p.

Research output: Contribution to journalArticleScientificpeer-review

Machine Learning: ECML 2002: 12th European Conference on Machine Learning

Elomaa, T. (ed.), Mannila, H. (ed.) & Toivonen, H. (ed.), 2002, Springer. 532 p. (LNCS; vol. 2430)

Research output: Book/ReportAnthology or special issueScientificpeer-review

Principles of Data Mining and Knowledge Discovery: 6th European Conference, PKDD 2002

Elomaa, T. (ed.), Mannila, H. (ed.) & Toivonen, H. (ed.), 2002, Springer. 514 p. (LNCS; vol. 2431)

Research output: Book/ReportAnthology or special issueScientificpeer-review

2003

An MDL method for finding haplotype blocks and for estimating the strength of haplotype block boundaries

Koivisto, M., Perola, M., Varilo, T., Hennah, W., Ekelund, J., Lukk, M., Peltonen, L., Ukkonen, E. & Mannila, H., 2003, Pacific Symposium on Biocomputing 2003. Altman, R. B., Dunker, A. K., Hunter, L., Jung, T. A. & Klein, T. E. (eds.). Toh Tuck Link: World Scientific, p. 502-13 12 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Discovering all most specific sentences

Gunopulos, D., Khardon, R., Mannila, H., Saluja, S., Toivonen, H. & Sharma, R. S., 2003, In : ACM Transactions on Database Systems. 28, p. 140-174 35 p.

Research output: Contribution to journalArticleScientificpeer-review

Louhi ja naistenmaa: Kalevalaisten runojen Pohjolan sijainti peruskartan nimistön valossa

Pulkkinen, R. H., Salmenkivi, M., Leino, A. & Mannila, H., 2003, In : Sananjalka (Turku). 45, p. 67–78

Research output: Contribution to journalArticleScientificpeer-review

Rule Discovery and Probabilistic Modeling for Onomastic Data

Leino, A., Mannila, H. & Pitkänen, R. L., 2003, Knowledge Discovery in Databases: PKDD 2003: PKDD 2003. Lavrac, N., Gamberger, D. & Blockeel, H. (eds.). Springer, p. 291–302 12 p. (Lecture Notes in Artificial Intelligence; no. 2838).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

2005

A hidden Markov technique for haplotype reconstruction

Rastas, P., Koivisto, M., Mannila, H. & Ukkonen, E., 2005, Algorithms in Bioinformatics (WABI-2005). Springer-Verlag, p. 140-151 12 p. (Lecture Notes in Computer Science; vol. 3692).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

A look at aerosol formation using data mining techniques

Hyvönen, S., Junninen, H., Laakso, L., Dal Maso, M., Grönholm, T., Bonn, B., Keronen, P., Aalto, P., Hiltunen, V., Pohja, T., Launiainen, S., Hari, P., Mannila, H. & Kulmala, M., 2005, In : Atmospheric Chemistry and Physics. 5, p. 3345-3356 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Clustering aggregation

Gionis, A., Mannila, H. & Tsaparas, P., 2005, The 21st International Conference on Data Engineering (ICDE 2005) April 5-8, 2005 National Center of Sciences, Tokyo, Japan.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Finding partial orders from unordered 0-1 data

Ukkonen, A., Fortelius, M. & Mannila, H., 2005, KDD-2005. p. 285-293 9 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Method for gene mapping from chromosome and phenotype data

Toivonen, H., Onkamo, P., Vasko, K., Ollikainen, V. V., Sevon, P., Mannila, H. & Kere, J., 21 Jun 2005, USA, Patent No. 6909971, 20 May 2010

Research output: Patent