Research output per year
Research output per year
Personal profile
Fields of Science
- 1184 Genetics, developmental biology, physiology
International and National Collaboration
Publications and projects within past five years.
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Jellyfish: integrative visualization of spatio-temporal tumor evolution and clonal dynamics
Lavikka, K., Maarala, A. I., Oikkonen, J. & Hautaniemi, S., 1 Mar 2025, In: Bioinformatics. 41, 3, 4 p., btaf091.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
A synthetic lethal dependency on casein kinase 2 in response to replication-perturbing therapeutics in RB1-deficient cancer cells
Bulanova, D., Akimov, Y., Senkowski, W., Oikkonen, J., Gall-Mas, L., Timonen, S., Elmadani, M., Hynninen, J., Hautaniemi, S., Aittokallio, T. & Wennerberg, K., 23 May 2024, In: Science Advances. 10, 21, 15 p., eadj1564.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Chemotherapy induces myeloid-driven spatially confined T cell exhaustion in ovarian cancer
Launonen, I.-M., Niemiec, I., Hincapié-Otero, M., Erkan, E. P., Junquera, A., Afenteva, D., Falco, M. M., Liang, Z., Salko, M., Chamchougia, F., Szabo, A., Perez-Villatoro, F., Li, Y., Micoli, G., Nagaraj, A., Haltia, U.-M., Kahelin, E., Oikkonen, J., Hynninen, J. & Virtanen, A. & 6 others, , 9 Dec 2024, In: Cancer Cell. 42, 12, p. 2045-2063.e10 29 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Deciphering cancer genomes with GenomeSpy: a grammar-based visualization toolkit
Lavikka, K., Oikkonen, J., Li, Y., Muranen, T., Micoli, G., Marchi, G., Lahtinen, A., Huhtinen, K., Lehtonen, R., Hietanen, S., Hynninen, J., Virtanen, A. & Hautaniemi, S., 5 Aug 2024, In: GigaScience. 13, 15 p., giae040.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Extensive mutational ctDNA profiles reflect High-grade serous cancer tumors and reveal emerging mutations at recurrence
Marchi, G., Rajavuori, A., Nguyen, M. T. N., Huhtinen, K., Oksa, S., Hietanen, S., Hautaniemi, S., Hynninen, J. & Oikkonen, J., Jan 2024, In: Translational oncology. 39, 8 p., 101814.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile
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Syöpäsäätiö 2025-26_Hautaniemi Sampsa
Hautaniemi, S. (Project manager), Micoli, G. (Participant) & Oikkonen, J. (Participant)
Syöpäsäätiö sr Cancerstiftelsen sr
01/01/2025 → 31/12/2026
Project: Foundations (Private Foundations, Non-Profit Foundations, Charitable Trusts)
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Orion_Targetizer: a computational platfo
Hautaniemi, S. (Project manager), Afenteva, D. (Participant), Lavikka, K. A. (Participant) & Oikkonen, J. (Participant)
Orion Oyj / Orion Corporation Orion Pharma
01/07/2024 → 01/07/2025
Project: Corporate funding
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Suomalais-Ugrilainen muinaisgenomi
Onkamo, P. (Project manager), Oikkonen, J. (Participant), Översti, S. (Participant), Salmela, E. (Participant), Salo, K. H. (Participant), Nordqvist, K. (Participant) & Junno, A. (Participant)
Koneen Säätiö, Jane and Aatos Erkko Foundation
01/01/2016 → …
Project: Research project
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Biological basis of musical aptitude
Ukkola-Vuoti, L. (Project manager) & Oikkonen, J. (Participant)
20/02/2011 → …
Project: Research project
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Gene-culture evolution in music
Ukkola-Vuoti, L. (Participant), Oikkonen, J. (Participant), Onkamo, P. (Participant), Raijas, P. (Participant) & Karma, K. (Participant)
01/04/2002 → …
Project: Research project
Activities
- 1 Academic visit to other institution
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The Institute of Cancer Research- ICR- United Kingdom
Oikkonen, J. (Visiting researcher)
14 Oct 2019 → 27 Oct 2019Activity: Visiting an external institution types › Academic visit to other institution