Research output per year
Research output per year
Personal profile
Description of research and teaching
Bioinformatics, Structural bioinformatics, NGS analysis, computational methods for Cryo-EM, (Bio)Python.
Fields of Science
- 119 Other natural sciences
- Bioinformatics
International and National Collaboration
Publications and projects within past five years.
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Cryo-EM structure of ssDNA bacteriophage ΦCjT23 provides insight into early virus evolution
Kejzar, N., Laanto, E., Rissanen, I., Abrishami, V., Selvaraj, M., Moineau, S., Ravantti, J., Sundberg, L. R. & Huiskonen, J. T., Dec 2022, In: Nature Communications. 13, 7478.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Mucin induces CRISPR-Cas defense in an opportunistic pathogen
Almeida, G., Hoikkala, V., Ravantti, J., Rantanen, N. & Sundberg, L-R., 25 Jun 2022, In: Nature Communications. 13, 12 p., 3653.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Sex-specific familial aggregation of cancers in Finland
Sipilä, L. J., Seppä, K., Aavikko, M., Ravantti, J., Heikkinen, S., Aaltonen, L. A. & Pitkäniemi, J., 6 Sep 2022, In: Scientific Reports. 12, 1, 9 p., 15126.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Classification of the Viral World Based on Atomic Level Structures
Ravantti, J. & Abrescia, N., 2021, Encyclopedia of Virology. Zuckerman, M. & Bamford, DH. (eds.). 4 ed. Oxford: Academic Press, Vol. 1. p. 153-161Research output: Chapter in Book/Report/Conference proceeding › Chapter › Scientific › peer-review
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Cooperation between Different CRISPR-Cas Types Enables Adaptation in an RNA-Targeting System
Hoikkala, V., Ravantti, J., Diez-Villasenor, C., Tiirola, M., Conrad, R. A., McBride, M. J., Moineau, S. & Sundberg, L-R., 2021, In: mBio. 12, 2, 18 p., ARTN e03338-20.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile
Projects
- 1 Finished
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Center of Excellence in Virus Research (CoE_VIRRES)
Bamford, D. H., Bamford, J., Butcher, S., Oksanen, H. M., Poranen, M., Roine, E., Kainov, D., Tuma, R., Ravantti, J., Huiskonen, J., Jäälinoja, H., Ora, A., Hattula, K., Ziedaite, G., Romanovskaya, A., Lisal, J., Buivydas, A., Redder, P., Domanska, A., Vilen, S., Manole, V., Happonen, L., Seitsonen, J., Liljeroos, L., Suchanova, B., Falck, S., Daugelavicius, R., Golubtsov, A., Yuan, P., Anastasina, M., Karhu, N. J., Koivunen, M., Laurinavicius, S., Wallin, A., Aalto, A. P., Sarin, P., Atanasova, N., Sun, X., Pietilä, M., Krupovic, M., Cvirkaite-Krupovic, V., Kukkaro, P. & Pirttimaa, M.
25/02/2011 → 31/12/2016
Project: Research Evaluation 2011
Activities
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PhD thesis Co-supervisor of Svetlana Sofieva
Janne Ravantti (Supervisor)
2019 → …Activity: Examination types › Supervisor or co-supervisor of doctoral thesis
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PhD thesis Co-supervisor of Lauri Sipilä
Janne Ravantti (Supervisor)
2017 → …Activity: Examination types › Supervisor or co-supervisor of doctoral thesis
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Reviewer of PhD thesis of Bhanupratap Singh Chouhan
Janne Ravantti (Pre-examiner)
2016Activity: Examination types › Pre-examiner of doctoral thesis
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Member of thesis committee of Linping Wang
Janne Ravantti (Member of thesis committee / follow-up group)
2015 → …Activity: Examination types › Member of doctoral thesis committee / follow-up group
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Okinawa Institute of Science and Technology (OIST)
Janne Ravantti (Visiting researcher)
23 Oct 2015 → 30 Oct 2015Activity: Visiting an external institution types › Academic visit to other institution
Press/Media
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University of Helsinki: Breakthrough in Understanding Genesis of Fibroids
Biswajyoti Sahu, Davide Berta & Janne Ravantti
05/08/2021
1 item of Media coverage
Press/Media: Press / Media
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Breakthrough in understanding genesis of fibroids
Niko Välimäki, Kristiina Rajamäki, Biswajyoti Sahu, Davide Berta & Janne Ravantti
05/08/2021
2 items of Media coverage
Press/Media: Press / Media
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Mathematics supports a new way to classify viruses based on structure
Dennis Bamford & Janne Ravantti
22/02/2017 → 27/02/2017
2 items of Media coverage
Press/Media: Press / Media
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Researchers find new evidence to support structure-based classification system for viruses
Dennis Bamford & Janne Ravantti
23/02/2017 → 24/02/2017
2 items of Media coverage
Press/Media: Press / Media
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Mathematics supports a new way to classify viruses based on structure -- ScienceDaily
Dennis Bamford & Janne Ravantti
23/02/2017
1 item of Media coverage
Press/Media: Press / Media