Research output per year
Research output per year
Personal profile
Description of research and teaching
Bioinformatics, Structural bioinformatics, NGS analysis, computational methods for Cryo-EM, (Bio)Python.
Fields of Science
- 119 Other natural sciences
- Bioinformatics
International and National Collaboration
Publications and projects within past five years.
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Classification of the Viral World Based on Atomic Level Structures
Ravantti, J. & Abrescia, N., 2021, Encyclopedia of Virology. Zuckerman, M. & Bamford, DH. (eds.). 4 ed. Oxford: Academic Press, Vol. 1. p. 153-161Research output: Chapter in Book/Report/Conference proceeding › Chapter › Scientific › peer-review
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Cooperation between Different CRISPR-Cas Types Enables Adaptation in an RNA-Targeting System
Hoikkala, V., Ravantti, J., Diez-Villasenor, C., Tiirola, M., Conrad, R. A., McBride, M. J., Moineau, S. & Sundberg, L-R., 2021, In: mBio. 12, 2, 18 p., ARTN e03338-20.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Deficient H2A.Z deposition is associated with genesis of uterine leiomyoma
Berta, D. G., Kuisma, H., Välimäki, N., Räisänen, M., Jäntti, M., Pasanen, A., Karhu, A., Kaukomaa, J., Taira, A., Cajuso, T., Nieminen, S., Penttinen, R-M., Ahonen, S., Lehtonen, R., Mehine, M., Vahteristo, P., Jalkanen, J., Sahu, B., Ravantti, J., Mäkinen, N. & 7 others, , 19 Aug 2021, In: Nature. 596, 7872, 34 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Genetic and Epigenetic Characteristics of Inflammatory Bowel Disease–Associated Colorectal Cancer
Rajamäki, K., Taira, A., Katainen, R., Välimäki, N., Kuosmanen, A., Plaketti, R-M., Seppälä, T. T., Ahtiainen, M., Wirta, E-V., Vartiainen, E., Sulo, P., Ravantti, J., Lehtipuro, S., Granberg, K. J., Nykter, M., Tanskanen, T., Ristimäki, A., Koskensalo, S., Renkonen-Sinisalo, L., Lepistö, A. & 6 others, , 21 Aug 2021, In: Gastroenterology. 161, 2, p. 592–607 16 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Ice nucleation by viruses and their potential for cloud glaciation
Adams, M. P., Atanasova, N. S., Sofieva, S., Ravantti, J., Heikkinen, A., Brasseur, Z., Duplissy, J., Bamford, D. H. & Murray, B. J., 28 Jul 2021, In: Biogeosciences. 18, 14, p. 4431-4444 14 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile
Projects
- 1 Finished
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Center of Excellence in Virus Research (CoE_VIRRES)
Bamford, D. H., Bamford, J., Butcher, S., Oksanen, H. M., Poranen, M., Roine, E., Kainov, D., Tuma, R., Ravantti, J., Huiskonen, J., Jäälinoja, H., Ora, A., Hattula, K., Ziedaite, G., Romanovskaya, A., Lisal, J., Buivydas, A., Redder, P., Domanska, A., Vilen, S., Manole, V., Happonen, L., Seitsonen, J., Liljeroos, L., Suchanova, B., Falck, S., Daugelavicius, R., Golubtsov, A., Yuan, P., Anastasina, M., Karhu, N. J., Koivunen, M., Laurinavicius, S., Wallin, A., Aalto, A. P., Sarin, P., Atanasova, N., Sun, X., Pietilä, M., Krupovic, M., Cvirkaite-Krupovic, V., Kukkaro, P. & Pirttimaa, M.
25/02/2011 → 31/12/2016
Project: Research Evaluation 2011
Activities
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PhD thesis Co-supervisor of Svetlana Sofieva
Janne Ravantti (Supervisor)
2019 → …Activity: Examination types › Supervisor or co-supervisor of doctoral thesis
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PhD thesis Co-supervisor of Lauri Sipilä
Janne Ravantti (Supervisor)
2017 → …Activity: Examination types › Supervisor or co-supervisor of doctoral thesis
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Reviewer of PhD thesis of Bhanupratap Singh Chouhan
Janne Ravantti (Pre-examiner)
2016Activity: Examination types › Pre-examiner of doctoral thesis
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Member of thesis committee of Linping Wang
Janne Ravantti (Member of thesis committee / follow-up group)
2015 → …Activity: Examination types › Member of doctoral thesis committee / follow-up group
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Okinawa Institute of Science and Technology (OIST)
Janne Ravantti (Visiting researcher)
23 Oct 2015 → 30 Oct 2015Activity: Visiting an external institution types › Academic visit to other institution
Press / Media
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Breakthrough in understanding genesis of fibroids
Niko Välimäki, Kristiina Rajamäki, Biswajyoti Sahu, Davide Berta & Janne Ravantti
05/08/2021
2 items of Media coverage
Press/Media: Press / Media
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University of Helsinki: Breakthrough in Understanding Genesis of Fibroids
Biswajyoti Sahu, Davide Berta & Janne Ravantti
05/08/2021
1 item of Media coverage
Press/Media: Press / Media
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Mathematics supports a new way to classify viruses based on structure
Dennis Bamford & Janne Ravantti
22/02/2017 → 27/02/2017
2 items of Media coverage
Press/Media: Press / Media
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Researchers find new evidence to support structure-based classification system for viruses
Dennis Bamford & Janne Ravantti
23/02/2017 → 24/02/2017
2 items of Media coverage
Press/Media: Press / Media
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Mathematics supports a new way to classify viruses based on structure -- ScienceDaily
Dennis Bamford & Janne Ravantti
23/02/2017
1 item of Media coverage
Press/Media: Press / Media