Research output per year
Research output per year
Personal profile
Description of research and teaching
Bioinformatics, Structural bioinformatics, NGS analysis, computational methods for Cryo-EM, (Bio)Python.
Fields of Science
- 119 Other natural sciences
- Bioinformatics
International and National Collaboration
Publications and projects within past five years.
Publications
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Classification of the Viral World Based on Atomic Level Structures
Ravantti, J. & Abrescia, N., 2021, Encyclopedia of Virology. Zuckerman, M. & Bamford, DH. (eds.). 4 ed. Oxford: Academic Press, Vol. 1. p. 153-161Research output: Chapter in Book/Report/Conference proceeding › Chapter › Scientific › peer-review
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Cooperation between Different CRISPR-Cas Types Enables Adaptation in an RNA-Targeting System
Hoikkala, V., Ravantti, J., Diez-Villasenor, C., Tiirola, M., Conrad, R. A., McBride, M. J., Moineau, S. & Sundberg, L-R., 2021, In: mBio. 12, 2, 18 p., ARTN e03338-20.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
No evidence of EMAST in whole genome sequencing data from 248 colorectal cancers
Kondelin, J., Martin, S., Katainen, R., Renkonen-Sinisalo, L., Lepistö, A., Koskensalo, S., Böhm, J., Mecklin, J-P., Cajuso, T., Hänninen, U. A., Välimäki, N., Ravantti, J., Rajamäki, K., Palin, K. & Aaltonen, L. A., 19 Feb 2021, (E-pub ahead of print) In: Genes, Chromosomes & Cancer. 11 p.Research output: Contribution to journal › Article › Scientific › peer-review
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Structure Unveils Relationships between RNA Virus Polymerases
Mönttinen, H., Ravantti, J. & Poranen, M., Feb 2021, In: Viruses-Basel. 13, 2, 17 p., 313.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Adapting a phage to combat phage resistance
Laanto, E., Mäkelä, K., Hoikkala, V., Ravantti, J. & Sundberg, L-R., 29 May 2020, In: Antibiotics. 9, 6, 11 p., 291.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile
Projects
- 1 Finished
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Center of Excellence in Virus Research (CoE_VIRRES)
Bamford, D., Bamford, J., Butcher, S., Oksanen, H. M., Poranen, M., Roine, E., Kainov, D., Tuma, R., Ravantti, J., Huiskonen, J., Jäälinoja, H., Ora, A., Hattula, K., Ziedaite, G., Romanovskaya, A., Lisal, J., Buivydas, A., Redder, P., Domanska, A., Vilen, S., Manole, V., Happonen, L., Seitsonen, J., Liljeroos, L., Suchanova, B., Falck, S., Daugelavicius, R., Golubtsov, A., Yuan, P., Anastasina, M., Karhu, N. J., Koivunen, M., Laurinavicius, S., Wallin, A., Aalto, A. P., Sarin, P., Atanasova, N., Sun, X., Pietilä, M., Krupovic, M., Cvirkaite-Krupovic, V., Kukkaro, P. & Pirttimaa, M.
25/02/2011 → 31/12/2016
Project: Research Evaluation 2011
Activities
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PhD thesis Co-supervisor of Lauri Sipilä
Janne Ravantti (Supervisor)
2017 → …Activity: Examination types › Supervisor or co-supervisor of doctoral thesis
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Reviewer of PhD thesis of Bhanupratap Singh Chouhan
Janne Ravantti (Pre-examiner)
2016Activity: Examination types › Pre-examiner of doctoral thesis
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Okinawa Institute of Science and Technology (OIST)
Janne Ravantti (Visiting researcher)
23 Oct 2015 → 30 Oct 2015Activity: Visiting an external institution types › Academic visit to other institution
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Member of thesis committee of Linping Wang
Janne Ravantti (Member of thesis committee / follow-up group)
2015 → …Activity: Examination types › Member of doctoral thesis committee / follow-up group
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University of Oxford
Janne Ravantti (Visiting researcher)
23 Jan 2014 → 24 Jan 2014Activity: Visiting an external institution types › Academic visit to other institution