Jing Tang

Personal profile

Education/Academic qualification

Biometry, Docentship, University of Helsinki

Statistics, PhD, University of Helsinki

Keywords

112 Statistics and probability
Bayesian statistics/Mathematical modeling
113 Computer and information sciences
Machine learning
1182 Biochemistry, cell and molecular biology
Cancer biology
3111 Biomedicine
Drug Discovery
1183 Plant biology, microbiology, virology
Microbial genetics

International and National Collaboration Publications and projects within past five years.

Publications 2007 2019

38 Article
3 Review Article
2 Chapter
2 Meeting Abstract
3 More

Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen

Menden, M. P., Wang, D., Mason, M. J., Szalai, B., Bulusu, K. C., Guan, Y., Yu, T., Kang, J., Jeon, M., Wolfinger, R., Nguyen, T., Zaslavskiy, M., Abante, J., Abecassis, B. S., Aben, N., Aghamirzaie, D., Aittokallio, T., Akhtari, F. S., Al-lazikani, B., Alam, T. & 280 othersAllam, A., Allen, C., de Almeida, M. P., Altarawy, D., Alves, V., Amadoz, A., Anchang, B., Antolin, A. A., Ash, J. R., Aznar, V. R., Ba-alawi, W., Bagheri, M., Bajic, V., Ball, G., Ballester, P. J., Baptista, D., Bare, C., Bateson, M., Bender, A., Bertrand, D., Wijayawardena, B., Boroevich, K. A., Bosdriesz, E., Bougouffa, S., Bounova, G., Brouwer, T., Bryant, B., Calaza, M., Calderone, A., Calza, S., Capuzzi, S., Carbonell-Caballero, J., Carlin, D., Carter, H., Castagnoli, L., Celebi, R., Cesareni, G., Chang, H., Chen, G., Chen, H., Chen, H., Cheng, L., Chernomoretz, A., Chicco, D., Cho, K-H., Cho, S., Choi, D., Choi, J., Choi, K., Choi, M., Cock, M. D., Coker, E., Cortes-Ciriano, I., Cserzö, M., Cubuk, C., Curtis, C., Daele, D. V., Dang, C. C., Dijkstra, T., Dopazo, J., Draghici, S., Drosou, A., Dumontier, M., Ehrhart, F., Eid, F-E., ElHefnawi, M., Elmarakeby, H., van Engelen, B., Engin, H. B., de Esch, I., Evelo, C., Falcao, A. O., Farag, S., Fernandez-Lozano, C., Fisch, K., Flobak, A., Fornari, C., Foroushani, A. B. K., Fotso, D. C., Fourches, D., Friend, S., Frigessi, A., Gao, F., Gao, X., Gerold, J. M., Gestraud, P., Ghosh, S., Gillberg, J., Godoy-Lorite, A., Godynyuk, L., Godzik, A., Goldenberg, A., Gomez-Cabrero, D., Gonen, M., de Graaf, C., Gray, H., Grechkin, M., Guimera, R., Guney, E., Haibe-Kains, B., Han, Y., Hase, T., He, D., He, L., Heath, L. S., Hellton, K. H., Helmer-Citterich, M., Hidalgo, M. R., Hidru, D., Hill, S. M., Hochreiter, S., Hong, S., Hovig, E., Hsueh, Y-C., Hu, Z., Huang, J. K., Huang, R. S., Hunyady, L., Hwang, J., Hwang, T. H., Hwang, W., Hwang, Y., Isayev, O., Don’t Walk, O. B., Jack, J., Jahandideh, S., Ji, J., Jo, Y., Kamola, P. J., Kanev, G. K., Karacosta, L., Karimi, M., Kaski, S., Kazanov, M., Khamis, A. M., Khan, S. A., Kiani, N. A., Kim, A., Kim, J., Kim, J., Kim, K., Kim, K., Kim, S., Kim, Y., Kim, Y., Kirk, P. D. W., Kitano, H., Klambauer, G., Knowles, D., Ko, M., Kohn-Luque, A., Kooistra, A. J., Kuenemann, M. A., Kuiper, M., Kurz, C., Kwon, M., van Laarhoven, T., Laegreid, A., Lederer, S., Lee, H., Lee, J., Lee, Y. W., Lepp_aho, E., Lewis, R., Li, J., Li, L., Liley, J., Lim, W. K., Lin, C., Liu, Y., Lopez, Y., Low, J., Lysenko, A., Machado, D., Madhukar, N., Maeyer, D. D., Malpartida, A. B., Mamitsuka, H., Marabita, F., Marchal, K., Marttinen, P., Mason, D., Mazaheri, A., Mehmood, A., Mehreen, A., Michaut, M., Miller, R. A., Mitsopoulos, C., Modos, D., Moerbeke, M. V., Moo, K., Motsinger-Reif, A., Movva, R., Muraru, S., Muratov, E., Mushthofa, M., Nagarajan, N., Nakken, S., Nath, A., Neuvial, P., Newton, R., Ning, Z., Niz, C. D., Oliva, B., Olsen, C., Palmeri, A., Panesar, B., Papadopoulos, S., Park, J., Park, S., Park, S., Pawitan, Y., Peluso, D., Pendyala, S., Peng, J., Perfetto, L., Pirro, S., Plevritis, S., Politi, R., Poon, H., Porta, E., Prellner, I., Preuer, K., Pujana, M. A., Ramnarine, R., Reid, J. E., Reyal, F., Richardson, S., Ricketts, C., Rieswijk, L., Rocha, M., Rodriguez-Gonzalvez, C., Roell, K., Rotroff, D., de Ruiter, J. R., Rukawa, P., Sadacca, B., Safikhani, Z., Safitri, F., Sales-Pardo, M., Sauer, S., Schlichting, M., Seoane, J. A., Serra, J., Shang, M-M., Sharma, A., Sharma, H., Shen, Y., Shiga, M., Shin, M., Shkedy, Z., Shopsowitz, K., Sinai, S., Skola, D., Smirnov, P., Soerensen, I. F., Soerensen, P., Song, J-H., Song, S. O., Soufan, O., Spitzmueller, A., Steipe, B., Suphavilai, C., Tamayo, S. P., Tamborero, D., Tang, J., Tanoli, Z-R., Tarres-Deulofeu, M., Tegner, J., Thommesen, L., Tonekaboni, S. A. M., Tran, H., Troyer, E. D., Truong, A., Tsunoda, T., Turu, G., Tzeng, G-Y., Verbeke, L., Videla, S. & Consortium, A-S. D. C. DREAM., 2019, In : Nature Communications. 10, 1

Research output: Contribution to journal › Article › Scientific › peer-review

DrugComb: an integrative cancer drug combination data portal

Zagidullin, B., Aldahdooh, J. M. F., Zheng, S., Wang, W., Wang, Y., Saad, J., Malyutina, A., Jafari, M., Tanoli, Z-R., Pessia, A. & Tang, J., 8 May 2019, In : Nucleic Acids Research.

Research output: Contribution to journal › Article › Scientific › peer-review

Open Access

File

Drug combination sensitivity scoring facilitates the discovery of synergistic and efficacious drug combinations in cancer

Malyutina, A., Majumder, M. M., Wang, W., Pessia, A., Heckman, C. A. & Tang, J., 20 May 2019, In : PLoS Computational Biology. 15, 5, p. e1006752 19 p., 1006752.

Research output: Contribution to journal › Article › Scientific › peer-review

Open Access

File

Making Sense of the Epigenome Using Data Integration Approaches

Cazaly, E., Saad, J., Wang, W., Heckman, C., Ollikainen, M. & Tang, J., 19 Feb 2019, In : Frontiers in Pharmacology. 10, 15 p., 126.

Research output: Contribution to journal › Review Article › Scientific › peer-review

Open Access

File

Network pharmacology modeling identifies synergistic Aurora B and ZAK interaction in triple-negative breast cancer

Tang, J., Gautam, P., Gupta, A., He, L., Timonen, S., Akimov, Y., Wang, W., Szwajda, A., Jaiswal, A., Turei, D., Yadav, B., Kankainen, M., Saarela, J., Saez-Rodriguez, J., Wennerberg, K. & Aittokallio, T., 2019, In : npj Systems Biology and Applications. 5, 1

Research output: Contribution to journal › Article › Scientific › peer-review

Projects 2013 2022

1 Active
4 Finished

DrugComb: ERC Starting Grant: Informatics approaches for the rational selection of personalized cancer drug combinations

Tang, J.

01/06/2017 → 31/05/2022

Project: Research project

Personalizing health and care - creating medically-driven integrative bioinformatics applications focused on oncology, CNS disorders and their comorbidities

Aittokallio, T. & Tang, J.

01/05/2015 → 30/04/2017

Project: Research project

Cancer society of Finland - Individualized drug target combinations: prediction, testing and translation

Tang, J., Aittokallio, T. & Wennerberg, K.

01/01/2015 → 31/12/2016

Project: Research project

CONTROL: Synthetic controllability of biological networks through understanding and engineering their control elements

Aittokallio, T. & Tang, J.

01/09/2013 → 31/08/2017

Project: Research project

Prediction of synergistic anticancer drug combinations and their potential side-effects by integrating transcriptional and pharmacological data

Tang, J., Kibble, M. M. & Aittokallio, T.

01/01/2013 → 31/12/2013

Project: Research project

Prizes

Academy of Finland Research Fellow

Jing Tang (Recipient), 1 Sep 2018

Prize: Prizes and awards

Helsinki Challenge

Jing Tang (Recipient), Samu Kurki (Recipient), Tero Aittokallio (Recipient), Emma I. Andersson (Recipient), Evgeny Kulesskiy (Recipient), Ashwini Kumar (Recipient), Dimitrios Tsallos (Recipient), Muntasir Majumder (Recipient), Olli Dufva (Recipient) & Mikko Keränen (Recipient), 22 Nov 2017

Prize: Prizes and awards