Research output per year
Research output per year
Personal profile
Fields of Science
- 113 Computer and information sciences
- bioinformatics
- machine learning
- computational systems biology
International and National Collaboration
Publications and projects within past five years.
-
Systematic review of computational methods for drug combination prediction
Kong, W., Midena, G., Chen, Y., Athanasiadis, P., Wang, T., Rousu, J., He, L. & Aittokallio, T., 2022, In: Computational and Structural Biotechnology Journal. 20, p. 2807-2814 8 p.Research output: Contribution to journal › Review Article › Scientific › peer-review
Open AccessFile -
Modeling drug combination effects via latent tensor reconstruction
Wang, T., Szedmak, S., Wang, H., Aittokallio, T., Pahikkala, T., Cichonska, A. & Rousu, J., Jul 2021, In: Bioinformatics. 37, p. I93-I101 9 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Leveraging multi-way interactions for systematic prediction of pre-clinical drug combination effects
Julkunen, H., Cichonska, A., Gautam, P., Szedmak, S., Douat, J., Pahikkala, T., Aittokallio, T. & Rousu, J., 1 Dec 2020, In: Nature Communications. 11, 11 p., 6136.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Systematic mapping of cancer cell target dependencies using high-throughput drug screening in triple-negative breast cancer
Wang, T., Gautam, P., Rousu, J. & Aittokallio, T., 2020, In: Computational and Structural Biotechnology Journal. 18, p. 3819-3832 14 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Learning with multiple pairwise kernels for drug bioactivity prediction
Cichonska, A., Pahikkala, T., Szedmak, S., Julkunen, H., Airola, A., Heinonen, M., Aittokallio, T. & Rousu, J., 1 Jul 2018, In: Bioinformatics. 34, 13, p. 509-518 10 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile
Projects
- 3 Finished
-
Modelling Functional Shifts in Enzyme Evolution
Pitkänen, E., Astikainen, K., Rousu, J. & Szedmak, S.
01/01/2006 → 31/12/2008
Project: Research project
-
Statistical Multilingual Analysis for Retrieval and Translation
Yu, H., Kääriäinen, M., Valtonen, K. & Rousu, J.
01/01/2006 → 30/09/2009
Project: Research project
-
Experimental and computational analysis of physiological regulation at transcriptome, proteome and metabolome level
Rousu, J., Rantanen, A. J., Pitkänen, E. & Heinonen, M.
01/01/2004 → 31/12/2007
Project: Research project
Activities
-
Phd thesis opponent
Juho Rousu (Opponent)
27 Jan 2012Activity: Examination types › Opponent of doctoral dissertation
-
Academy of Finland (External organisation)
Juho Rousu (Chair)
4 Nov 2011Activity: Membership types › Membership or other role in national/international committee, council, board
-
Machine Learning in Systems Biology
Juho Rousu (Speaker: Presenter)
20 Jul 2011 → 21 Jul 2011Activity: Participating in or organising an event types › Organisation and participation in conferences, workshops, courses, seminars
-
PhD thesis pre-examination
Juho Rousu (Pre-examiner)
16 Jun 2011 → 8 Aug 2011Activity: Examination types › Pre-examiner of doctoral thesis
-
Pattern Recognition in Bioinformatics
Juho Rousu (Scientific Committee Member)
10 Feb 2011 → 4 Nov 2011Activity: Participating in or organising an event types › Organisation and participation in conferences, workshops, courses, seminars