Research output per year
Research output per year
Personal profile
Fields of Science
- 113 Computer and information sciences
- bioinformatics
- machine learning
- computational systems biology
International and National Collaboration
Publications and projects within past five years.
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Leveraging multi-way interactions for systematic prediction of pre-clinical drug combination effects
Julkunen, H., Cichonska, A., Gautam, P., Szedmak, S., Douat, J., Pahikkala, T., Aittokallio, T. & Rousu, J., 1 Dec 2020, In: Nature Communications. 11, 11 p., 6136.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Systematic mapping of cancer cell target dependencies using high-throughput drug screening in triple-negative breast cancer
Wang, T., Gautam, P., Rousu, J. & Aittokallio, T., 2020, In: Computational and Structural Biotechnology Journal. 18, p. 3819-3832 14 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Learning with multiple pairwise kernels for drug bioactivity prediction
Cichonska, A., Pahikkala, T., Szedmak, S., Julkunen, H., Airola, A., Heinonen, M., Aittokallio, T. & Rousu, J., 1 Jul 2018, In: Bioinformatics. 34, 13, p. 509-518 10 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Computational-experimental approach to drug-target interaction mapping: A case study on kinase inhibitors
Cichonska, A., Ravikumar, B., Parri, E., Timonen, S., Pahikkala, T., Airola, A., Wennerberg, K., Rousu, J. & Aittokallio, T., 7 Aug 2017, In: PLoS Computational Biology. 13, 8, 28 p., 1005678.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Critical Assessment of Small Molecule Identification 2016: automated methods
Schymanski, E. L., Ruttkies, C., Krauss, M., Brouard, C., Kind, T., Duehrkop, K., Allen, F., Vaniya, A., Verdegem, D., Boecker, S., Rousu, J., Shen, H., Tsugawa, H., Sajed, T., Fiehn, O., Ghesquiere, B. & Neumann, S., 27 Mar 2017, In: Journal of Cheminformatics. 9, 21 p., 22.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile
Projects
- 3 Finished
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Statistical Multilingual Analysis for Retrieval and Translation
Yu, H., Kääriäinen, M., Valtonen, K. & Rousu, J.
01/01/2006 → 30/09/2009
Project: Research project
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Modelling Functional Shifts in Enzyme Evolution
Pitkänen, E., Astikainen, K., Rousu, J. & Szedmak, S.
01/01/2006 → 31/12/2008
Project: Research project
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Experimental and computational analysis of physiological regulation at transcriptome, proteome and metabolome level
Rousu, J., Rantanen, A. J., Pitkänen, E. & Heinonen, M.
01/01/2004 → 31/12/2007
Project: Research project
Activities
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Phd thesis opponent
Juho Rousu (Opponent)
27 Jan 2012Activity: Examination types › Opponent of doctoral dissertation
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PhD thesis pre-examination
Juho Rousu (Pre-examiner)
16 Jun 2011 → 8 Aug 2011Activity: Examination types › Pre-examiner of doctoral thesis
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Academy of Finland (External organisation)
Juho Rousu (Chair)
4 Nov 2011Activity: Membership types › Membership or other role in national/international committee, council, board
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Opponent of doctoral dissertation
Juho Rousu (Opponent)
26 Aug 2011Activity: Examination types › Opponent of doctoral dissertation
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Machine Learning in Systems Biology
Juho Rousu (Speaker: Presenter)
20 Jul 2011 → 21 Jul 2011Activity: Participating in or organising an event types › Organisation and participation in conferences, workshops, courses, seminars