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Personal profile

Keywords

  • 113 Computer and information sciences
  • bioinformatics
  • machine learning
  • computational systems biology

International and National Collaboration Publications and projects within past five years.

Publications 2003 2018

Learning with multiple pairwise kernels for drug bioactivity prediction

Cichonska, A., Pahikkala, T., Szedmak, S., Julkunen, H., Airola, A., Heinonen, M., Aittokallio, T. & Rousu, J., 1 Jul 2018, In : Bioinformatics. 34, 13, p. 509-518 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File

Computational-experimental approach to drug-target interaction mapping: A case study on kinase inhibitors

Cichonska, A., Ravikumar, B., Parri, E., Timonen, S., Pahikkala, T., Airola, A., Wennerberg, K., Rousu, J. & Aittokallio, T., 7 Aug 2017, In : PLoS Computational Biology. 13, 8, 28 p., 1005678.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File

Critical Assessment of Small Molecule Identification 2016: automated methods

Schymanski, E. L., Ruttkies, C., Krauss, M., Brouard, C., Kind, T., Duehrkop, K., Allen, F., Vaniya, A., Verdegem, D., Boecker, S., Rousu, J., Shen, H., Tsugawa, H., Sajed, T., Fiehn, O., Ghesquiere, B. & Neumann, S., 27 Mar 2017, In : Journal of Cheminformatics. 9, 21 p., 22.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File

metaCCA: summary statistics-based multivariate meta-analysis of genome-wide association studies using canonical correlation analysis

Cichonska, A., Rousu, J., Marttinen, P., Kangas, A. J., Soininen, P., Lehtimaki, T., Raitakari, O. T., Jarvelin, M-R., Salomaa, V., Ala-Korpela, M., Ripatti, S. & Pirinen, M., 1 Jul 2016, In : Bioinformatics. 32, 13, p. 1981-1989 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File

Profiling persistent tubercule bacilli from patient sputa during therapy predicts early drug efficacy

Honeyborne, I., McHugh, T. D., Kuittinen, I., Cichonska, A., Evangelopoulos, D., Ronacher, K., van Helden, P. D., Gillespie, S. H., Fernandez-Reyes, D., Walzl, G., Rousu, J., Butcher, P. D. & Waddell, S. J., 7 Apr 2016, In : BMC Medicine. 14, 13 p., 68.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File

Projects 2004 2009

Statistical Multilingual Analysis for Retrieval and Translation

Yu, H., Kääriäinen, M., Valtonen, K. & Rousu, J.

01/01/200630/09/2009

Project: Research project

Modelling Functional Shifts in Enzyme Evolution

Pitkänen, E., Astikainen, K., Rousu, J. & Szedmak, S.

01/01/200631/12/2008

Project: Research project

Activities 2003 2012

Phd thesis opponent

Juho Rousu (Opponent)
27 Jan 2012

Activity: Examination typesOpponent of doctoral dissertation

Academy of Finland (External organisation)

Juho Rousu (Chair)
4 Nov 2011

Activity: Membership typesMembership or other role in national/international committee, council, board

International Conference on Pattern Recognition Applications and Methods

Juho Rousu (Scientific Committee Member)
10 Jan 20118 Feb 2012

Activity: Participating in or organising an event typesOrganisation and participation in conferences, workshops, courses, seminars

PhD thesis pre-examination

Juho Rousu (Pre-examiner)
16 Jun 20118 Aug 2011

Activity: Examination typesPre-examiner of doctoral thesis

Machine Learning in Systems Biology

Juho Rousu (Speaker: Presenter)
20 Jul 201121 Jul 2011

Activity: Participating in or organising an event typesOrganisation and participation in conferences, workshops, courses, seminars

Press / Media

Radiaattori

Juho Rousu

21/02/2007

1 media contribution

Press/Media: Press / Media