Research Output per year
Personal profile
Keywords
- 113 Computer and information sciences
- bioinformatics
- machine learning
- computational systems biology
International and National Collaboration
Publications and projects within past five years.
Publications 2003 2018
Learning with multiple pairwise kernels for drug bioactivity prediction
Cichonska, A., Pahikkala, T., Szedmak, S., Julkunen, H., Airola, A., Heinonen, M., Aittokallio, T. & Rousu, J., 1 Jul 2018, In : Bioinformatics. 34, 13, p. 509-518 10 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
File
Computational-experimental approach to drug-target interaction mapping: A case study on kinase inhibitors
Cichonska, A., Ravikumar, B., Parri, E., Timonen, S., Pahikkala, T., Airola, A., Wennerberg, K., Rousu, J. & Aittokallio, T., 7 Aug 2017, In : PLoS Computational Biology. 13, 8, 28 p., 1005678.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
File
Critical Assessment of Small Molecule Identification 2016: automated methods
Schymanski, E. L., Ruttkies, C., Krauss, M., Brouard, C., Kind, T., Duehrkop, K., Allen, F., Vaniya, A., Verdegem, D., Boecker, S., Rousu, J., Shen, H., Tsugawa, H., Sajed, T., Fiehn, O., Ghesquiere, B. & Neumann, S., 27 Mar 2017, In : Journal of Cheminformatics. 9, 21 p., 22.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
File
metaCCA: summary statistics-based multivariate meta-analysis of genome-wide association studies using canonical correlation analysis
Cichonska, A., Rousu, J., Marttinen, P., Kangas, A. J., Soininen, P., Lehtimaki, T., Raitakari, O. T., Jarvelin, M-R., Salomaa, V., Ala-Korpela, M., Ripatti, S. & Pirinen, M., 1 Jul 2016, In : Bioinformatics. 32, 13, p. 1981-1989 9 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
File
Profiling persistent tubercule bacilli from patient sputa during therapy predicts early drug efficacy
Honeyborne, I., McHugh, T. D., Kuittinen, I., Cichonska, A., Evangelopoulos, D., Ronacher, K., van Helden, P. D., Gillespie, S. H., Fernandez-Reyes, D., Walzl, G., Rousu, J., Butcher, P. D. & Waddell, S. J., 7 Apr 2016, In : BMC Medicine. 14, 13 p., 68.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
File
Projects 2004 2009
- 3 Finished
Statistical Multilingual Analysis for Retrieval and Translation
Yu, H., Kääriäinen, M., Valtonen, K. & Rousu, J.
01/01/2006 → 30/09/2009
Project: Research project
Modelling Functional Shifts in Enzyme Evolution
Pitkänen, E., Astikainen, K., Rousu, J. & Szedmak, S.
01/01/2006 → 31/12/2008
Project: Research project
Experimental and computational analysis of physiological regulation at transcriptome, proteome and metabolome level
Rousu, J., Rantanen, A. J., Pitkänen, E. & Heinonen, M.
01/01/2004 → 31/12/2007
Project: Research project
Activities 2003 2012
Phd thesis opponent
Juho Rousu (Opponent)27 Jan 2012
Activity: Examination types › Opponent of doctoral dissertation
Academy of Finland (External organisation)
Juho Rousu (Chair)4 Nov 2011
Activity: Membership types › Membership or other role in national/international committee, council, board
International Conference on Pattern Recognition Applications and Methods
Juho Rousu (Scientific Committee Member)10 Jan 2011 → 8 Feb 2012
Activity: Participating in or organising an event types › Organisation and participation in conferences, workshops, courses, seminars
PhD thesis pre-examination
Juho Rousu (Pre-examiner)16 Jun 2011 → 8 Aug 2011
Activity: Examination types › Pre-examiner of doctoral thesis
Machine Learning in Systems Biology
Juho Rousu (Speaker: Presenter)20 Jul 2011 → 21 Jul 2011
Activity: Participating in or organising an event types › Organisation and participation in conferences, workshops, courses, seminars