Research output per year
Research output per year
Personal profile
Fields of Science
- 3122 Cancers
- Ovarian cancer
- Single cell
- 3111 Biomedicine
- 113 Computer and information sciences
- Transcriptomic data analysis
- 112 Statistics and probability
International and National Collaboration
Publications and projects within past five years.
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Longitudinal single-cell RNA-seq analysis reveals stress-promoted chemoresistance in metastatic ovarian cancer
Zhang, K., Erkan, E. P., Jamalzadeh, S., Dai, J., Andersson, N., Kaipio, K., Lamminen, T., Mansuri, N., Huhtinen, K., Carpen, O., Hietanen, S., Oikkonen, J., Hynninen, J., Virtanen, A., Häkkinen, A., Hautaniemi, S. & Väharautio, A., Feb 2022, In: Science Advances. 8, 8, 18 p., 1831.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Multiomics characterization implicates PTK7 in ovarian cancer EMT and cell plasticity and offers strategies for therapeutic intervention
Raivola, J., Dini, A., Karvonen, H., Piki, E., Salokas, K., Niininen, W., Kaleva, L., Zhang, K., Arjama, M., Gudoityte, G., Seashore-Ludlow, B., Varjosalo, M., Kallioniemi, O., Hautaniemi, S., Murumagi, A. & Ungureanu, D., 17 Aug 2022, In: Cell Death and Disease. 13, 8, 12 p., 714.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Co-evolution of matrisome and adaptive adhesion dynamics drives ovarian cancer chemoresistance
Pietilä, E. A., Gonzalez-Molina, J., Moyano-Galceran, L., Jamalzadeh, S., Zhang, K., Lehtinen, L., Turunen, S. P., Martins, T. A., Gultekin, O., Lamminen, T., Kaipio, K., Joneborg, U., Hynninen, J., Hietanen, S., Grenman, S., Lehtonen, R., Hautaniemi, S., Carpen, O., Carlson, J. W. & Lehti, K., 23 Jun 2021, In: Nature Communications. 12, 1, 19 p., 3904.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Human cell transformation by combined lineage conversion and oncogene expression
Sahu, B., Pihlajamaa, P., Zhang, K., Palin, K., Ahonen, S., Cervera, A., Ristimäki, A., Aaltonen, L. A., Hautaniemi, S. & Taipale, J., 9 Sep 2021, In: Oncogene. 40, p. 5533-5547 15 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
miQC: An adaptive probabilistic framework for quality control of single-cell RNA-sequencing data
Hippen, A. A., Falco, M. M., Weber, L. M., Erkan, E. P., Zhang, K., Doherty, J. A., Vähärautio, A., Greene, C. S. & Hicks, S. C., Aug 2021, In: PLoS Computational Biology. 17, 8, 18 p., 1009290.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile