Research output per year
Research output per year
Personal profile
Fields of Science
- 113 Computer and information sciences
- 1184 Genetics, developmental biology, physiology
- 3122 Cancers
International and National Collaboration
Publications and projects within past five years.
Publications
- 4 Article
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Deciphering cancer genomes with GenomeSpy: a grammar-based visualization toolkit
Lavikka, K., Oikkonen, J., Li, Y., Muranen, T., Micoli, G., Marchi, G., Lahtinen, A., Huhtinen, K., Lehtonen, R., Hietanen, S., Hynninen, J., Virtanen, A. & Hautaniemi, S., 5 Aug 2024, In: GigaScience. 13, 15 p., giae040.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
HRD related signature 3 predicts clinical outcome in advanced tubo-ovarian high-grade serous carcinoma
Koskela, H., Li, Y., Joutsiniemi, T., Muranen, T., Isoviita, V. M., Huhtinen, K., Micoli, G., Lavikka, K., Marchi, G., Hietanen, S., Virtanen, A., Hautaniemi, S., Oikkonen, J. & Hynninen, J., Jan 2024, In: Gynecologic Oncology. 180, p. 91-98 8 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Evolutionary states and trajectories characterized by distinct pathways stratify patients with ovarian high grade serous carcinoma
Lahtinen, A., Hautaniemi, S., Lavikka, K. A., Virtanen, A., Li, Y., Jamalzadeh, S., Skorda, A., Rossberg Lauridsen, A., Zhang, K., Marchi, G., Isoviita, V.-M., Ariotta, V., Lehtonen, J. O., Muranen, T. A., Huhtinen, K. L., Carpen, O. M., Hietanen, S., Senkowski, W., Kallunki, T. & Häkkinen, A. & 1 others, , 12 Jun 2023, In: Cancer Cell. 41, 6, p. 1103-+ 28 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Optimized detection of homologous recombination deficiency improves the prediction of clinical outcomes in cancer
Perez Villatoro, F. R., Oikkonen, J., Casado, J., Chernenko, A., Gulhan, D. C., Tumiati, M., Li, Y., Lavikka, K. A., Hietanen, S., Hynninen, J., Haltia, U.-M., Tyrmi, J. S., Laivuori, H., Konstantinopoulos, P. A., Hautaniemi, S., Kauppi, L. & Färkkilä, A., 2022, In: npj precision oncology. 6, 1, 13 p., 96.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile
Projects
- 1 Active
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Orion_Targetizer: a computational platfo
Hautaniemi, S. (Project manager), Afenteva, D. (Participant), Lavikka, K. A. (Participant) & Oikkonen, J. (Participant)
Orion Oyj / Orion Corporation Orion Pharma
01/07/2024 → 01/07/2025
Project: Corporate funding