Research output per year
Research output per year
Personal profile
Fields of Science
- 1182 Biochemistry, cell and molecular biology
- Proteomics
- 119 Other natural sciences
- Molecular microbiology, probiotics, pathogens, biofilms
International and National Collaboration
Publications and projects within past five years.
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Aerobic Adaptation and Metabolic Dynamics of Propionibacterium freudenreichii DSM 20271: Insights from Comparative Transcriptomics and Surfaceome Analysis
Loivamaa, I., Sillanpää, L. A., Deptula, P., Chamlagain, B., Edelmann, M., Auvinen, P., Nyman, T., Savijoki, K., Piironen, V. & Varmanen, P., 30 Apr 2024, In: bioRxiv.Research output: Contribution to journal › Article › Scientific
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Drug repurposing platform for deciphering the druggable SARS-CoV-2 interactome
Bogacheva, M., Kuivanen, S., Potdar, S., Hassinen, A., Huuskonen, S., Pöhner, I., Luck, T. J., Turunen, L., Feodoroff, M., Szirovicza, L., Savijoki, K., Saarela, J., Tammela, P., Paavolainen, L., Poso, A., Varjosalo, M., Kallioniemi, O., Pietiäinen, V. & Vapalahti, O., Mar 2024, In: Antiviral Research. 223, 15 p., 105813.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Revised Whole-Genome and DNA-Methylome of Mycobacterium marinum type strain ATCC 927T
Savijoki, K., Deptula, P., Roberts, R. J., Hammarén, M. M., Yli-Kauhaluoma, J., Varmanen, P. & Parikka, M., 28 Feb 2024, In: Microbiology Resource Announcements. 13, 4, 5 p., e01016-23.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Antibacterial and antibiofilm activity of permanently ionized quaternary ammonium fluoroquinolones
Fedorowicz, J., Cruz, C. D., Morawska, M., Ciura, K., Gilbert-Girard, S., Mazur, L., Mäkkylä, H., Ilina, P., Savijoki, K., Fallarero, A., Tammela, P. & Sączewski, J., 5 Jun 2023, In: European Journal of Medicinal Chemistry. 254, 14 p., 115373.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
In vitro and ex vivo proteomics of Mycobacterium marinum biofilms and the development of biofilm-binding synthetic nanobodies
Hammarén, M., Luukinen, H., Sillanpää, A., Remans, K., Lapouge, K., Custódio, T., Löw, C., Myllymäki, H., Montonen, T., Seeger, M., Roberstson, J., Nyman, T. A., Savijoki, K. & Parikka, M., 29 Jun 2023, In: mSystems. 8, 3, 27 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile
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DisRUPT: Mykobakteeribiofilmien estäminen tuberkuloosin lääkehoidon tehostamiseksi
Yli-Kauhaluoma, J. & Savijoki, K.
Suomen Akatemia Projektilaskutus
01/09/2022 → 31/08/2026
Project: Research Council of Finland: Academy Project
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Proteomics and Surfaceomics of Staphylococcus aureus
Frees, D., Mellerkaard Pedersen, M., Savijoki, K. & Nyman, T. A.
05/11/2016 → …
Project: Other project
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B12WEGAIN: Natural vitamin B12 fortification of future foods by bioprocessing and controlled cell-lysis of Propionibacterium freudenreichii
Varmanen, P., Piironen, V., Sillanpää, L. A., Loivamaa, I., Savijoki, K., Chamlagain, B. & Edelmann, M.
01/01/2021 → 31/12/2023
Project: Research project
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Molecular basis for natural vitamin B12 fortification of emerging new foods by utilization of Propionibacterium freudenreichii
Piironen, V., Loivamaa, I., Edelmann, M., Chamlagain, B., Savijoki, K., Varmanen, P., Sillanpää, L. A. & Zhang, R.
01/09/2019 → 31/08/2023
Project: Research project
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Utaretulehdus ja antibioottiresistenssi − mikä on kalvovesikkeleiden rooli?
Siljamäki, P., Savijoki, K., Varmanen, P., Taponen, S. & Nyman, T.
01/05/2018 → 31/12/2020
Project: Research project
Datasets
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ProteomeXchange / PRIDE dataset ID PXD030232
Hanski, L. (Creator), Taavitsainen-Wahlroos, E. (Creator), Miettinen, I. (Creator), Reigada, I. (Creator), Savijoki, K. (Creator) & Nyman, T. A. (Creator), European Bioinformatics Institute, 14 Apr 2022
Dataset
Activities
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Weizhe Wang
Pekka Varmanen (Host) & Kirsi Savijoki (Host)
4 Oct 2023 → 15 Nov 2023Activity: Hosting a visitor types › Academic visit at UH
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Eline Van Lergberghe
Pekka Varmanen (Host) & Kirsi Savijoki (Host)
14 Sept 2022 → 21 Dec 2022Activity: Hosting a visitor types › Academic visit at UH
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Supervision of M.Sc. thesis of Julie Bruyndonckx (University of Antwerp, Belgium)
Cristina Durante Cruz (Supervisor), Päivi Tammela (Supervisor) & Kirsi Savijoki (Supervisor)
Sept 2021 → Dec 2021Activity: Examination types › Supervision of other thesis (Master's, Licentiate)
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Supervision of M.Sc. thesis of Eline Freire Boullosa (University of Antwerp, Belgium)
Cristina Durante Cruz (Supervisor), Kirsi Savijoki (Supervisor) & Päivi Tammela (Supervisor)
Sept 2020 → Dec 2020Activity: Examination types › Supervision of other thesis (Master's, Licentiate)
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Journal of Microbiological Methods (Journal)
Kirsi Savijoki (Reviewer)
2019 → …Activity: Publication peer-review and editorial work types › Peer review of manuscripts