Research output per year
Research output per year
Personal profile
Research interests
- Clinical Bioinformatics- Biomarker discovery
- Analysis of Multi-Omics data and apply statistical methodologies to answer key questions related to clinical research
- Development of bioinformatics pipelines and efficient scripting to analyze and perform statistics on DNA-seq, RNA-seq data.
- Cloud computing for data analysis
- Data mining and machine learning on large biological datasets
- Designing bioinformatics algorithms including unsupervised and supervised machine learning
Education information
2005-2007 B.Sc Biotechnology
2008-2010 M.Sc Bioinformatics (University of Pune)
2008-2010 M.Sc Bioinformatics (University of Pune)
Fields of Science
- 1181 Ecology, evolutionary biology
- Genomics
- Evolutionary Biology
- Microbiota
- Genome evolution
- Transcriptomic data analysis
- 3111 Biomedicine
- Genomics
- Biomarker
- Bioinformatics, Systems biology
- Next generation sequencing
International and National Collaboration
Publications and projects within past five years.
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Inhibition of Vascular Endothelial Growth Factor Receptors 1 and 2 Attenuates Natural Killer Cell and Innate Immune Responses in an Experimental Model for Obliterative Bronchiolitis
Krebs, R., Tikkanen, J. M., Raissadati, A., Hollmen, M., Dhaygude, K. & Lemstrom, K. B., Feb 2022, In: The American Journal of Pathology. 192, 2, p. 254-269 16 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Plasma proteome of brain-dead organ donors predicts heart transplant outcome
Lukac, J., Dhaygude, K., Saraswat, M., Joenväärä, S., Syrjälä, S. O., Holmström, E. J., Krebs, R., Renkonen, R., Nykänen, A. I. & Lemström, K. B., 1 Mar 2022, In: Journal of Heart and Lung Transplantation. 41, 3, p. 311-324 14 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Genomics of asthma, allergy and chronic rhinosinusitis: novel concepts and relevance in airway mucosa
Laulajainen-Hongisto, A., Lyly, A., Hanif, T., Dhaygude, K., Kankainen, M., Renkonen, R., Donner, K., Mattila, P., Jartti, T., Bousquet, J., Kauppi, P. & Toppila-Salmi, S., 28 Oct 2020, In: Clinical and Translational Allergy. 10, 1, 17 p., 45.Research output: Contribution to journal › Review Article › Scientific › peer-review
Open AccessFile -
Instability of natural selection at candidate barrier loci underlying speciation in wood ants
Kulmuni, J., Nouhaud, P., Pluckrose, L., Satokangas, I., Dhaygude, K. & Butlin, R. K., 2 Oct 2020, In: Molecular Ecology. 29, 20, p. 3988-3999 12 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Maternal smoking during pregnancy affects adult onset of asthma in offspring: a follow up from birth to age 46 years
Toppila-Salmi, S., Luukkainen, A. T., Xu, B., Lampi, J., Auvinen, J., Dhaygude, K., Järvelin, M-R. & Pekkanen, J., 1 Sep 2020, In: European Respiratory Journal. 55, 6, 11 p., 1901857.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile
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AirGOs2: Aggravated airway inflammation: research on genome-scale solutions
Toppila-Salmi, S., Pekkanen, J., Karjalainen, J., Dhaygude, K., Kankainen, M., Ojala, T., Haahtela, T., Renkonen, R., Mäkelä, M., Mäkitie, A., Kauppi, P., Virkkula, P., Cardell, L., Bisgaard, H., Bonnelykke, K., Siroux, V. & Bousquet, J.
01/03/2018 → …
Project: Research project
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The cross-talk between epithelium, genome and microbiome in the pathogenesis of airway allergy, asthma and chronic rhinosinusitis
Toppila-Salmi, S., Mattila, P., Kankainen, M., Terna, E., Renkonen, J., Joenväärä, S., Kauppi, P., Mäkelä, M., Haahtela, T. M. K., Pelkonen, A. S., Auvinen, P., Alenius, H., Hanif, T., Dhaygude, K. & Renkonen, R.
01/03/2011 → …
Project: Research project
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The Centre of Excellence in Biological Interactions (BIOINT)
Sundström, L., Kokko, H., Bos, N., Freitak, D., Salmela, H., Helanterä, H., Johansson, H., Laakso, J., Seppä, P., Lindström, S., Morandin, C., Paviala, J., Pekkonen, M., Pulliainen, U., Ozan, M., Schultner, E., Stucki, D., Wolf, J., Galarza, J., Kulmuni, J., Hakala, S. M. & Dhaygude, K.
01/01/2012 → 31/12/2017
Project: Research project
Prizes
Activities
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23rd Spring Symposium
Kishor Dhaygude (Member of organizing committee)
3 Mar 2014 → 5 Mar 2014Activity: Participating in or organising an event types › Organisation and participation in conferences, workshops, courses, seminars
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Organism Biology Annual Workshop
Kishor Dhaygude (Speaker: Presenter)
4 Jun 2014 → 5 Jun 2014Activity: Participating in or organising an event types › Organisation and participation in conferences, workshops, courses, seminars
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Bayesian inference using BEAST
Kishor Dhaygude (Attendee)
26 May 2014 → 30 May 2014Activity: Participating in or organising an event types › Organisation and participation in conferences, workshops, courses, seminars
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1st Finnish Molecular Ecology and Evolution Symposium
Kishor Dhaygude (Attendee)
8 Oct 2014 → 10 Oct 2014Activity: Participating in or organising an event types › Organisation and participation in conferences, workshops, courses, seminars
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Third DNA metabarcoding spring school
Kishor Dhaygude (Speaker: Presenter)
31 Mar 2014 → 6 Apr 2014Activity: Participating in or organising an event types › Organisation and participation in conferences, workshops, courses, seminars