Research Output per year
Publications 1996 2019
2019
Caspase-2 and p75 neurotrophin receptor (p75NTR) are involved in the regulation of SREBP and lipid genes in hepatocyte cells
Pham, D. D., Bruelle, C., Do, H. T., Pajanoja, C., Jin, C., Olkkonen, V. M., Eriksson-Rosenberg, O., Jauhiainen, M., Lalowski, M. & Lindholm, D., 11 Jul 2019, In : Cell Death and Disease. 10, 15 p., 537.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
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Functional analysis of synovial fluid from osteoarthritic knee and carpometacarpal joints unravels different molecular profiles
Barreto, G., Soliymani, R., Baumann, M., Waris, E., Eklund, K. K., Zenobi-Wong, M. & Lalowski, M., May 2019, In : Rheumatology. 58, 5, p. 897-907 11 p.Research output: Contribution to journal › Article › Scientific › peer-review
HAS3-induced extracellular vesicles from melanoma cells stimulate IHH mediated c-Myc upregulation via the hedgehog signaling pathway in target cells.
Arasu, U. T., Deen, A. J., Pasonen-Seppänen, S., Heikkinen, S., Lalowski, M., Kärnä, R., Härkönen, K., Mäkinen, P., Lazaro Ibañez, E., Siljander, P., Oikari, S., Levonen, A-L. & Rilla, K., 9 Dec 2019, In : Cellular and Molecular Life Sciences.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
Muscle and serum metabolomes are dysregulated in colon-26 tumor-bearing mice despite amelioration of cachexia with activin receptor type 2B ligand blockade
Lautaoja, J. H., Lalowski, M., Nissinen, T. A., Hentila, J., Shi, Y., Ritvos, O., Cheng, S. & Hulmi, J. J., May 2019, In : American Journal of Physiology: Endocrinology and Metabolism. 316, 5, p. E852-E865 14 p.Research output: Contribution to journal › Article › Scientific › peer-review
Reactive oxygen species-regulating proteins peroxiredoxin 2 and thioredoxin, and glyceraldehyde-3-phosphate dehydrogenase are differentially abundant in induced sputum from smokers with lung cancer or asbestos exposure.
Rostila, A. M., Anttila, S. L., Lalowski, M. M., Vuopala, K. S., Toljamo, T. I., Lindström, I., Baumann, M. H. & Puustinen, A., 15 Sep 2019, In : European Journal of Cancer Prevention.Research output: Contribution to journal › Article › Scientific › peer-review
Simple 3D culture of dissociated kidney mesenchyme mimics nephron progenitor niche and facilitates nephrogenesis Wnt-independently
Dapkunas, A., Rantanen, V., Gui, Y., Lalowski, M., Sainio, K., Kuure, S. & Sariola, H., 17 Sep 2019, In : Scientific Reports. 9, 10 p., 13433.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
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2018
Characterizing the Key Metabolic Pathways of the Neonatal Mouse Heart Using a Quantitative Combinatorial Omics Approach
Lalowski, M. M., Björk, S., Finckenberg, P., Soliymani, R., Tarkia, M., Calza, G., Blokhina, D., Tulokas, S., Kankainen, M., Lakkisto, P., Baumann, M., Kankuri, E. & Mervaala, E., 11 Apr 2018, In : Frontiers in Physiology. 9, 20 p., 365.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
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Estrogen regulates muscle bioenergetic signaling
Laakkonen, E. K., Soliymani, R. & Lalowski, M., 4 Feb 2018, In : Aging. 10, 2, p. 160-161 2 p.Research output: Contribution to journal › Editorial › Scientific
Open Access
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Lactate-Induced Glucose Output Is Unchanged by Metformin at a Therapeutic Concentration - A Mass Spectrometry Imaging Study of the Perfused Rat Liver
Calza, G., Nyberg, E., Mäkinen, M., Soliymani, R., Cascone, A., Lindholm, D., Barborini, E., Baumann, M., Lalowski, M. & Eriksson, O., 22 Feb 2018, In : Frontiers in Pharmacology. 9, 12 p., 141.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
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SETBP1 induces transcription of a network of development genes by acting as an epigenetic hub
Piazza, R., Magistroni, V., Redaelli, S., Mauri, M., Massimino, L., Sessa, A., Peronaci, M., Lalowski, M., Soliymani, R., Mezzatesta, C., Pirola, A., Banfi, F., Rubio, A., Rea, D., Stagno, F., Usala, E., Martino, B., Campiotti, L., Merli, M., Passamonti, F. & 7 others, , 6 Jun 2018, In : Nature Communications. 9, 13 p., 2192.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
File
2017
Commentary: LACTB is a tumour suppressor that modulates lipid metabolism and cell state
Eriksson, O., Lalowski, M. & Lindholm, D., 2017, In : Frontiers in Physiology. 8, 3 p., 396.Research output: Contribution to journal › Comment/debate › Scientific › peer-review
Open Access
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Estrogenic regulation of skeletal muscle proteome: a study of premenopausal women and postmenopausal MZ cotwins discordant for hormonal therapy
Laakkonen, E. K., Soliymani, R., Karvinen, S., Kaprio, J., Kujala, U. M., Baumann, M., Sipilä, S., Kovanen, V. & Lalowski, M., Dec 2017, In : Aging Cell. 16, 6, p. 1276-1287 12 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
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Recent advances in applying mass spectrometry and systems biology to determine brain dynamics
Scifo, E., Calza, G., Fuhrmann, M., Soliymani, R., Baumann, M. & Lalowski, M., 1 Jun 2017, In : Expert review of proteomics.. 14, 6, p. 545-559 15 p.Research output: Contribution to journal › Review Article › Scientific › peer-review
The Networks of Genes Encoding Palmitoylated Proteins in Axonal and Synaptic Compartments Are Affected in PPT1 Overexpressing Neuronal-Like Cells
Pezzini, F., Bianchi, M., Benfatto, S., Griggio, F., Doccini, S., Carrozzo, R., Dapkunas, A., Delledonne, M., Santorelli, F. M., Lalowski, M. M. & Simonati, A., 22 Aug 2017, In : Frontiers in Molecular Neuroscience. 10, 18 p., 266.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
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Transcriptomic Profiling Discloses Molecular and Cellular Events Related to Neuronal Differentiation in SH-SY5Y Neuroblastoma Cells
Pezzini, F., Bettinetti, L., Di Leva, F., Bianchi, M., Zoratti, E., Carrozzo, R., Santorelli, F. M., Delledonne, M., Lalowski, M. & Simonati, A., May 2017, In : Cellular and Molecular Neurobiology. 37, 4, p. 665-682 18 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
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2016
Label-Free LC-MS/MS Comparative Analysis of Protein S-Nitrosome in Synaptosomes from Wild-Type and APP Transgenic Mice
Zareba-Koziol, M., Lalowski, M. & Wyslouch-Cieszynska, A., May 2016, Analysis of Post-Translational Modifications and Proteolysis in Neuroscience. Grant, J. E. & Li, H. (eds.). Humana press, p. 73-96 24 p. (Neuromethods; no. 114).Research output: Chapter in Book/Report/Conference proceeding › Chapter › Scientific › peer-review
Peroxisome proliferator-activated receptor-gamma coactivator-1 alpha mediates neuroprotection against excitotoxic brain injury in transgenic mice: role of mitochondria and X-linked inhibitor of apoptosis protein
Mäkelä, J., Mudo, G., Pham, D. D., Di Liberto, V., Eriksson, O., Louhivuori, L., Bruelle, C., Soliymani, R., Baumann, M., Korhonen, L., Lalowski, M., Belluardo, N. & Lindholm, D., Mar 2016, In : European Journal of Neuroscience. 43, 5, p. 626-639 14 p.Research output: Contribution to journal › Article › Scientific › peer-review
Proteomic Profiling in the Brain of CLN1 Disease Model Reveals Affected Functional Modules
Tikka, S., Monogioudi, E., Gotsopoulos, A., Soliymani, R., Pezzini, F., Scifo, E., Uusi-Rauva, K., Tyynelä, J., Baumann, M. H., Jalanko, A., Simonati, A. & Lalowski, M. M., 22 Mar 2016, In : NeuroMolecular Medicine. 18, 1, p. 109-133Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
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2015
MALDI-Imaging Mass Spectrometry on Tissues
Mainini, V., Lalowski, M., Gotsopoulos, A., Bitsika, V., Baumann, M. & Magni, F., 2015, Clinical Proteomics: Methods and Protocols. Vlahou, A. & Makridakis, M. (eds.). 2nd. ed. ed. Totowa, NJ: Humana press, p. 139-164 26 p. (Methods in Molecular Biology; vol. 1243).Research output: Chapter in Book/Report/Conference proceeding › Chapter › Scientific › peer-review
Proteomic analysis of the palmitoyl protein thioesterase 1 interactome in SH-SY5Y human neuroblastoma cells
Scifo, E., Szwajda, A., Soliymani, R., Pezzini, F., Bianchi, M., Dapkunas, A., Debski, J., Uusi-Rauva, K., Dadlez, M., Gingras, A-C., Tyynelä, J., Simonati, A., Jalanko, A., Baumann, M. H. & Lalowski, M., 18 Jun 2015, In : Journal of Proteomics. 123, p. 42-53 12 p.Research output: Contribution to journal › Article › Scientific › peer-review
Quantitative analysis of PPT1 interactome in human neuroblastoma cells
Scifo, E., Szwajda, A., Soliymani, R., Pezzini, F., Bianchi, M., Dapkunas, A., Debski, J., Uusi-Rauvala, K., Dadlez, M., Gingras, A-C., Tyynelä, J., Simonati, A., Jalanko, A., Baumann, M. & Lalowski, M., 2015, In : Data in Brief. 4, p. 207-216 10 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
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Quantitative Interaction Proteomics of Neurodegenerative Disease Proteins
Hosp, F., Vossfeldt, H., Heinig, M., Vasiljevic, D., Arumughan, A., Wyler, E., Landthaler, M., Hubner, N., Wanker, E. E., Lannfelt, L., Ingelsson, M., Lalowski, M., Voigt, A., Selbach, M. & Genetic & Environm Risk Alzheimer', 19 May 2015, In : Cell Reports. 11, 7, p. 1134-1146 13 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open Access
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2014
Global Analysis of S-nitrosylation Sites in the Wild Type (APP) Transgenic Mouse Brain-Clues for Synaptic Pathology
Zareba-Koziol, M., Szwajda, A., Dadlez, M., Wyslouch-Cieszynska, A. & Lalowski, M., Sep 2014, In : Molecular & Cellular Proteomics. 13, 9, p. 2288-2305 18 p.Research output: Contribution to journal › Article › Scientific › peer-review
Inherited cancer predisposition sensitizes colonic mucosa to address Western diet effects and putative cancer-predisposing changes on mouse proteome
Bebek, D. D., Valo, S., Pussila, M., Reyhani, N., Sarantaus, L., Lalowski, M., Baumann, M. & Nyström, M., Nov 2014, In : Journal of Nutritional Biochemistry. 25, 11, p. 1196-1206 11 p.Research output: Contribution to journal › Article › Scientific › peer-review
2013
Cathepsin D deficiency induces cytoskeletal changes and affects cell migration pathways in the brain
Koch, S., Scifo, E., Rokka, A., Trippner, P., Lindfors, M., Korhonen, R., Corthals, G. L., Virtanen, I., Lalowski, M. & Tyynelä, J., Feb 2013, In : Neurobiology of Disease. 50, p. 107-119 13 p.Research output: Contribution to journal › Article › Scientific › peer-review
Drafting the CLN3 Protein Interactome in SH-SY5Y Human Neuroblastoma Cells: A Label-free Quantitative Proteomics Approach
Scifo, E., Szwajda, A., Debski, J., Uusi-Rauva, K., Kesti, T., Dadlez, M., Gingras, A-C., Tyynelä, J., Baumann, M. H., Jalanko, A. & Lalowski, M., May 2013, In : Journal of Proteome Research. 12, 5, p. 2101-2115 15 p.Research output: Contribution to journal › Article › Scientific › peer-review
File
Imaging mass spectrometry: a new tool for kidney disease investigations
Lalowski, M., Magni, F., Mainini, V., Monogioudi, E., Gotsopoulos, A., Soliymani, R., Chinello, C. & Baumann, M., Jul 2013, In : Nephrology, Dialysis, Transplantation. 28, 7, p. 1648-1656 9 p.Research output: Contribution to journal › Article › Scientific › peer-review
Proteomics imaging and the kidney
Magni, F., Lalowski, M., Mainini, V., Marchetti-Deschmann, M., Chinello, C., Urbani, A. & Baumann, M., 2013, In : JN : Journal of Nephrology. 26, 3, p. 430-436 7 p.Research output: Contribution to journal › Article › Scientific › peer-review
The Arctic AβPP mutation leads to Alzheimer's disease pathology with highly variable topographic deposition of differentially truncated Aβ
Kalimo, H. O., Lalowski, M., Bogdanovic, N., Philipson, O., Bird, T. D., Nochlin, D., Schellenberg, G. D., Brundin, R., Olofsson, T., Soliymani, R., Baumann, M., Wirths, O., Bayer, T. A., Nilsson, L. NG., Basun, H., Lannfelt, L. & Ingelsson, M., 2013, In : Acta Neuropathologica Communications. 1, 1, p. 60 19 p.Research output: Contribution to journal › Article › Scientific › peer-review
Translation of HTT mRNA with expanded CAG repeats is regulated by the MID1-PP2A protein complex
Krauss, S., Griesche, N., Jastrzebska, E., Chen, C., Rutschow, D., Achmueller, C., Dorn, S., Boesch, S. M., Lalowski, M., Wanker, E., Schneider, R. & Schweiger, S., Feb 2013, In : Nature Communications. 4, p. Article Number: 1511 9 p.Research output: Contribution to journal › Article › Scientific › peer-review
2012
Caloric Restriction Ameliorates Angiotensin II-Induced Mitochondrial Remodeling and Cardiac Hypertrophy
Finckenberg, P., Eriksson-Rosenberg, O., Baumann, M., Merasto, S., Lalowski, M. M., Levijoki, J., Haasio, K., Kyto, V., Muller, D. N., Luft, F. C., Oresic, M. & Mervaala, E., 2012, In : Hypertension Research. 59, p. 76-84 9 p.Research output: Contribution to journal › Article › Scientific › peer-review
Phosphorylation-regulated axonal dependent transport of syntaxin 1 is mediated by a Kinesin-1 adapter
Chua, J. J. E., Butkevich, E., Worseck, J. M., Kittelmann, M., Gronborg, M., Behrmann, E., Stelzl, U., Pavlos, N. J., Lalowski, M. M., Eimer, S., Wanker, E. E., Klopfenstein, D. R. & Jahn, R., 10 Apr 2012, In : Proceedings of the National Academy of Sciences of the United States of America. 109, 15, p. 5862-5867 6 p.Research output: Contribution to journal › Article › Scientific › peer-review
The Arctic amyloid-beta precursor protein (A beta PP) mutation results in distinct plaques and accumulation of N- and C-truncated A beta
Philipson, O., Lord, A., Lalowski, M., Soliymani, R., Baumann, M., Thyberg, J., Bogdanovic, N., Olofsson, T., Tjernberg, L. O., Ingelsson, M., Lannfelt, L., Kalimo, H. & Nilsson, L. N. G., 2012, In : Neurobiology of Aging. 33, 5, p. 1010 13 p.Research output: Contribution to journal › Article › Scientific › peer-review
2011
Systems biology approaches towards Neuronal ceroid lipofuscinoses interactome
Scifo, E., Mia-Lisa, S., Uusi-Rauva, K., Soliymani, R., Karjalainen, M., Kyttala, A., Baumann, M., Jalanko, A. & Lalowski, M., 2011, In : The FEBS Journal. 278, p. 151-151 1 p.Research output: Contribution to journal › Article › Scientific › peer-review
2001
Characterization of human palladin, a microfilament-associated protein
Mykkanen, O. M., Gronholm, M., Ronty, M., Lalowski, M., Salmikangas, P., Suila, H. & Carpen, O., 2001, In : Molecular Biology of the Cell. 12, p. 3060-3073 14 p.Research output: Contribution to journal › Article › Scientific › peer-review
1998
HB-GAM, a novel amyloid associated protein, is present in prion related disorders and other cerebral amyloidoses
Lalowski, M., Baumann, M., Rauvala, H., Frangione, B. & Wisniewski, T., 1998, In : Advances in Behavioral Biology. p. 121-131Research output: Contribution to journal › Article › Scientific › peer-review
1996
HB-GAM is a cytokine present in Alzheimer's and Down's syndrome lesions
Wisniewski, T., Lalowski, M., Baumann, M., Rauvala, H., Raulo, E., Nolo, R. & Frangione, B., 1996, In : NeuroReport. 7, p. 667-671Research output: Contribution to journal › Article › Scientific › peer-review