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  • PL 63 (Haartmaninkatu 8), C211b2

    HELSINGIN YLIOPISTO

    Finland

  • PL 63 (Haartmaninkatu 8)

    00014

    Finland

1987 …2019
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Publications 1987 2018

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2018
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Chymase released from hypoxia-activated cardiac mast cells cleaves human apoA-I at Tyr192 and compromises its cardioprotective activity

Kareinen, I., Baumann, M., Su Duy Nguyen, Maaninka, K., Anisimov, A., Tozuka, M., Jauhiainen, M., Lee-Rueckert, M. & Kovanen, P. T., Jun 2018, In : Journal of Lipid Research. 59, 6, p. 945-957 13 p.

Research output: Contribution to journalArticleScientificpeer-review

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Extracellular Lipids Accumulate in Human Carotid Arteries as Distinct Three-Dimensional Structures and Have Proinflammatory Properties

Lehti, S., Nguyen, S. D., Belevich, I., Vihinen, H., Heikkilä, H. M., Soliymani, R., Käkelä, R., Saksi, J., Jauhiainen, M., Grabowski, G. A., Kummu, O., Hörkkö, S., Baumann, M., Lindsberg, P. J., Jokitalo, E., Kovanen, P. T. & Öörni, K., Feb 2018, In : The American Journal of Pathology. 188, 2, p. 525-538 14 p.

Research output: Contribution to journalArticleScientificpeer-review

Functional analysis of synovial fluid from osteoarthritic knee and carpometacarpal joints unravels different molecular profiles

Barreto, G., Soliymani, R., Baumann, M. H., Waris, E. M., Eklund, K. K., Zenobi-Wong, M. & Lalowski, M. M., Aug 2018, In : Rheumatology. Key232.

Research output: Contribution to journalArticleScientificpeer-review

Lactate-Induced Glucose Output Is Unchanged by Metformin at a Therapeutic Concentration - A Mass Spectrometry Imaging Study of the Perfused Rat Liver

Calza, G., Nyberg, E., Mäkinen, M., Soliymani, R., Cascone, A., Lindholm, D., Barborini, E., Baumann, M., Lalowski, M. & Eriksson, O., 22 Feb 2018, In : Frontiers in Pharmacology. 9, 12 p., 141.

Research output: Contribution to journalArticleScientificpeer-review

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SETBP1 induces transcription of a network of development genes by acting as an epigenetic hub

Piazza, R., Magistroni, V., Redaelli, S., Mauri, M., Massimino, L., Sessa, A., Peronaci, M., Lalowski, M., Soliymani, R., Mezzatesta, C., Pirola, A., Banfi, F., Rubio, A., Rea, D., Stagno, F., Usala, E., Martino, B., Campiotti, L., Merli, M., Passamonti, F. & 7 othersOnida, F., Morotti, A., Pavesi, F., Bregni, M., Broccoli, V., Baumann, M. & Gambacorti-Passerini, C., 6 Jun 2018, In : Nature Communications. 9, 13 p., 2192.

Research output: Contribution to journalArticleScientificpeer-review

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Susceptibility of low-density lipoprotein particles to aggregate depends on particle lipidome, is modifiable, and associates with future cardiovascular deaths

Ruuth, M., Nguyen, S. D., Vihervaara, T. M., Hilvo, M., Laajala, T. D., Kondadi, P. K., Gistera, A., Lähteenmäki, H., Kittilä, T., Huusko, J., Uusitupa, M., Schwab, U., Savolainen, M. J., Sinisalo, J., Lokki, M-L., Nieminen, M. S., Jula, A., Perola, M., Ylä-Herttula, S., Rudel, L. & 12 othersÖörni, A., Baumann, M., Baruch, A., Laaksonen, R., Ketelhuth, D. F. J., Aittokallio, T., Jauhiainen, M., Käkelä, R., Boren, J., Williams, K. J., Kovanen, P. T. & Öörni, K., 14 Jul 2018, In : European Heart Journal. 39, 27, p. 2562-2573 13 p.

Research output: Contribution to journalArticleScientificpeer-review

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2017

Estrogenic regulation of skeletal muscle proteome: a study of premenopausal women and postmenopausal MZ cotwins discordant for hormonal therapy

Laakkonen, E. K., Soliymani, R., Karvinen, S., Kaprio, J., Kujala, U. M., Baumann, M., Sipilä, S., Kovanen, V. & Lalowski, M., Dec 2017, In : Aging Cell. 16, 6, p. 1276-1287 12 p.

Research output: Contribution to journalArticleScientificpeer-review

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Multi-infarct dementia of Swedish type is caused by a 3 ' UTR mutation of COL4A1

Siitonen, M., Borjesson-Hanson, A., Pöyhönen, M., Ora, A., Pasanen, P., Bras, J., Kern, S., Kern, J., Andersen, O., Stanescu, H., Kleta, R., Baumann, M., Kalaria, R., Kalimo, H., Singleton, A., Hardy, J., Viitanen, M., Myllykangas, L. & Guerreiro, R., May 2017, In : Brain : a journal of neurology. 140, 4 p., 29.

Research output: Contribution to journalArticleScientific

Open Access

Primary familial brain calcification linked to deletion of 5' noncoding region of SLC20A2

Pasanen, P., Mäkinen, J., Myllykangas, L., Guerreiro, R., Bras, J., Valori, M., Viitanen, M., Baumann, M., Tienari, P. J., Pöyhönen, M. & Baumann, P., Jul 2017, In : Acta Neurologica Scandinavica. 136, 1, p. 59-63 5 p.

Research output: Contribution to journalArticleScientificpeer-review

Western Diet Deregulates Bile Acid Homeostasis, Cell Proliferation, and Tumorigenesis in Colon

Dermadi, D., Valo, S., Ollila, S., Soliymani, R., Sipari, N., Pussila, M., Sarantaus, L., Linden, J., Baumann, M. & Nystrom, M., 15 Jun 2017, In : Cancer Research. 77, 12, p. 3352-3363 12 p.

Research output: Contribution to journalArticleScientificpeer-review

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2016

Gelsolin amyloid angiopathy causes severe disruption of the arterial wall

Koskelainen, S., Pihlamaa, T., Suominen, S., Zhao, F., Salo, T., Risteli, J., Baumann, M., Kalimo, H. & Kiuru-Enari, S., Aug 2016, In : APMIS. 124, 8, p. 639-648 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Peroxisome proliferator-activated receptor-gamma coactivator-1 alpha mediates neuroprotection against excitotoxic brain injury in transgenic mice: role of mitochondria and X-linked inhibitor of apoptosis protein

Mäkelä, J., Mudo, G., Pham, D. D., Di Liberto, V., Eriksson, O., Louhivuori, L., Bruelle, C., Soliymani, R., Baumann, M., Korhonen, L., Lalowski, M., Belluardo, N. & Lindholm, D., Mar 2016, In : European Journal of Neuroscience. 43, 5, p. 626-639 14 p.

Research output: Contribution to journalArticleScientificpeer-review

Proteomic Profiling in the Brain of CLN1 Disease Model Reveals Affected Functional Modules

Tikka, S., Monogioudi, E., Gotsopoulos, A., Soliymani, R., Pezzini, F., Scifo, E., Uusi-Rauva, K., Tyynelä, J., Baumann, M. H., Jalanko, A., Simonati, A. & Lalowski, M. M., 22 Mar 2016, In : NeuroMolecular Medicine. 18, 1, p. 109-133

Research output: Contribution to journalArticleScientificpeer-review

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2015

APOE and AGT in the Finnish p.Arg133Cys CADASIL population

Siitonen, M., Mykkanen, K., Pescini, F., Rovio, S., Kaariainen, H., Baumann, M., Poyhonen, M. & Viitanen, M., 1 Dec 2015, In : Acta Neurologica Scandinavica. 132, 6, p. 430-434 5 p.

Research output: Contribution to journalArticleScientific

Identification of cytoplasmic proteins interacting with unliganded estrogen receptor and in human breast cancer cells

Stellato, C., Nassa, G., Tarallo, R., Giurato, G., Ravo, M., Rizzo, F., Marchese, G., Alexandrova, E., Cordella, A., Baumann, M., Nyman, T. A., Weisz, A. & Ambrosino, C., 2015, In : Proteomics (Weinheim). 15, 11, p. 1801-1807 7 p.

Research output: Contribution to journalArticleScientificpeer-review

Mass-Tag Enhanced Immuno-Laser Desorption/Ionization Mass Spectrometry for Sensitive Detection of Intact Protein Antigens

Lorey, M., Adler, B., Yan, H., Soliymani, R., Ekström, S., Yli-Kauhaluoma, J., Laurell, T. & Baumann, M., 19 May 2015, In : Analytical Chemistry. 87, 10, p. 5255-5262 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Proteomic analysis of the palmitoyl protein thioesterase 1 interactome in SH-SY5Y human neuroblastoma cells

Scifo, E., Szwajda, A., Soliymani, R., Pezzini, F., Bianchi, M., Dapkunas, A., Debski, J., Uusi-Rauva, K., Dadlez, M., Gingras, A-C., Tyynelä, J., Simonati, A., Jalanko, A., Baumann, M. H. & Lalowski, M., 18 Jun 2015, In : Journal of Proteomics. 123, p. 42-53 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Quantitative analysis of PPT1 interactome in human neuroblastoma cells

Scifo, E., Szwajda, A., Soliymani, R., Pezzini, F., Bianchi, M., Dapkunas, A., Debski, J., Uusi-Rauvala, K., Dadlez, M., Gingras, A-C., Tyynelä, J., Simonati, A., Jalanko, A., Baumann, M. & Lalowski, M., 2015, In : Data in Brief. 4, p. 207-216 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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2014

Antigenic Differences between AS03 Adjuvanted Influenza A (H1N1) Pandemic Vaccines: Implications for Pandemrix-Associated Narcolepsy Risk

Vaarala, O., Vuorela, A., Partinen, M., Baumann, M., Freitag, T. L., Meri, S., Saavalainen, P., Jauhiainen, M., Soliymani, R., Kirjavainen, T., Olsen, P., Saarenpaa-Heikkila, O., Rouvinen, J., Roivainen, M., Nohynek, H., Jokinen, J., Julkunen, I. & Kilpi, T., 15 Dec 2014, In : PLoS One. 9, 12, 23 p., 114361.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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CADASIL and CARASIL

Tikka, S., Baumann, M., Siitonen, M., Pasanen, P., Poyhonen, M., Myllykangas, L., Viitanen, M., Fukutake, T., Cognat, E., Joutel, A. & Kalimo, H., Sep 2014, In : Brain Pathology. 24, 5, p. 525-544 20 p.

Research output: Contribution to journalArticleScientificpeer-review

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Kemiallisesti tuotetut kantasolut: Ikuisen nuoruuden lähde?

Baumann, M., Eriksson-Rosenberg, O. & Lindholm, D. B., 2014, In : Kemia - Kemi. 2, p. 52-54 3 p.

Research output: Contribution to journalArticleGeneral public

Post-transcriptional Regulation of Human Breast Cancer Cell Proteome by Unliganded Estrogen Receptor beta via microRNAs*

Nassa, G., Tarallo, R., Giurato, G., De Filippo, M. R., Ravo, M., Rizzo, F., Stellato, C., Ambrosino, C., Baumann, M., Lietzen, N., Nyman, T. A. & Weisz, A., Apr 2014, In : Molecular & Cellular Proteomics. 13, 4, p. 1076-1090 15 p.

Research output: Contribution to journalArticleScientificpeer-review

2013

Drafting the CLN3 Protein Interactome in SH-SY5Y Human Neuroblastoma Cells: A Label-free Quantitative Proteomics Approach

Scifo, E., Szwajda, A., Debski, J., Uusi-Rauva, K., Kesti, T., Dadlez, M., Gingras, A-C., Tyynelä, J., Baumann, M. H., Jalanko, A. & Lalowski, M., May 2013, In : Journal of Proteome Research. 12, 5, p. 2101-2115 15 p.

Research output: Contribution to journalArticleScientificpeer-review

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Experimental studies of mitochondrial function in CADASIL vascular smooth muscle cells

Viitanen, M., Sundstrom, E., Baumann, M., Pöyhönen, M., Tikka, S. M. S. & Behbahani, H., 1 Feb 2013, In : Experimental Cell Research. 319, 3, p. 134-143 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Imaging mass spectrometry: a new tool for kidney disease investigations

Lalowski, M., Magni, F., Mainini, V., Monogioudi, E., Gotsopoulos, A., Soliymani, R., Chinello, C. & Baumann, M., Jul 2013, In : Nephrology, Dialysis, Transplantation. 28, 7, p. 1648-1656 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Molecular Mechanisms of Selective Estrogen Receptor Modulator Activity in Human Breast Cancer Cells: Identification of Novel Nuclear Cofactors of Antiestrogen-ER alpha Complexes by Interaction Proteomics

Cirillo, F., Nassa, G., Tarallo, R., Stellato, C., De Filippo, M. R., Ambrosino, C., Baumann, M., Nyman, T. A. & Weisz, A., Jan 2013, In : Journal of Proteome Research. 12, 1, p. 421-431 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Oxidative Stress Is Associated With Cell Death, Wall Degradation, and Increased Risk of Rupture of the Intracranial Aneurysm Wall

Laaksamo, E., Tulamo, R., Liiman, A., Baumann, M., Friedlander, R. M., Hernesniemi, J., Kangasniemi, M., Niemela, M., Laakso, A. & Frosen, J., Jan 2013, In : Neurosurgery (Baltimore). 72, 1, p. 109-117 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Proteomics imaging and the kidney

Magni, F., Lalowski, M., Mainini, V., Marchetti-Deschmann, M., Chinello, C., Urbani, A. & Baumann, M., 2013, In : JN : Journal of Nephrology. 26, 3, p. 430-436 7 p.

Research output: Contribution to journalArticleScientificpeer-review

The Arctic AβPP mutation leads to Alzheimer's disease pathology with highly variable topographic deposition of differentially truncated Aβ

Kalimo, H. O., Lalowski, M., Bogdanovic, N., Philipson, O., Bird, T. D., Nochlin, D., Schellenberg, G. D., Brundin, R., Olofsson, T., Soliymani, R., Baumann, M., Wirths, O., Bayer, T. A., Nilsson, L. NG., Basun, H., Lannfelt, L. & Ingelsson, M., 2013, In : Acta Neuropathologica Communications. 1, 1, p. 60 19 p.

Research output: Contribution to journalArticleScientificpeer-review

2012

Binding of Hepcidin to Plasma Proteins

Itkonen, O., Stenman, U. H., Parkkinen, J., Soliymani, R., Baumann, M. & Hämäläinen, E., 2012, In : Advances in Clinical Chemistry. 58, 7, p. 1158-1160 3 p.

Research output: Contribution to journalArticleScientific

CADASIL mutations and shRNA silencing of NOTCH3 affect actin organization in cultured vascular smooth muscle cells

Tikka, S., Ng, Y. P., Di Maio, G., Mykkanen, K., Siitonen, M., Lepikhova, T., Pöyhönen, M., Viitanen, M., Virtanen, I., Kalimo, H. & Baumann, M., Dec 2012, In : Journal of Cerebral Blood Flow and Metabolism. 32, 12, p. 2171-2180 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Caloric Restriction Ameliorates Angiotensin II-Induced Mitochondrial Remodeling and Cardiac Hypertrophy

Finckenberg, P., Eriksson-Rosenberg, O., Baumann, M., Merasto, S., Lalowski, M. M., Levijoki, J., Haasio, K., Kyto, V., Muller, D. N., Luft, F. C., Oresic, M. & Mervaala, E., 2012, In : Hypertension Research. 59, p. 76-84 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Intracellular Signaling Pathways and Size, Shape, and Rupture History of Human Intracranial Aneurysms

Laaksamo, E., Ramachandran, M., Frösen, J., Tulamo, R., Baumann, M., Friedlander, R. M., Harbaugh, R. E., Hernesniemi, J., Niemela, M., Raghavan, M. L. & Laakso, A., 2012, In : Neurosurgery (Baltimore). 70, 6, p. 1565-1572 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Recognition of Porphyromonas gingivalis Gingipain Epitopes by Natural IgM Binding to Malondialdehyde Modified Low-Density Lipoprotein

Turunen, S. P., Kummu, O., Harila, K., Veneskoski, M., Soliymani, R., Baumann, M., Pussinen, P. J. & Horkko, S., 2012, In : PLoS One. 7, 4, p. Article Number: e34910 16 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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The Arctic amyloid-beta precursor protein (A beta PP) mutation results in distinct plaques and accumulation of N- and C-truncated A beta

Philipson, O., Lord, A., Lalowski, M., Soliymani, R., Baumann, M., Thyberg, J., Bogdanovic, N., Olofsson, T., Tjernberg, L. O., Ingelsson, M., Lannfelt, L., Kalimo, H. & Nilsson, L. N. G., 2012, In : Neurobiology of Aging. 33, 5, p. 1010 13 p.

Research output: Contribution to journalArticleScientificpeer-review

Trypsin-2 Enhances Carcinoma Invasion by Processing Tight Junctions and Activating ProMT1-MMP

Vilen, S-T., Suojanen, J., Salas, F., Risteli, J., Ylipalosaari, M., Itkonen, O., Koistinen, H. K., Baumann, M., Stenman, U. H., Sorsa, T., Salo, T. & Nyberg, P., 1 Oct 2012, In : Cancer Investigation. 30, 8, p. 583-592 10 p.

Research output: Contribution to journalArticleScientificpeer-review

2011

A large set of estrogen receptor beta-interacting proteins identified by tandem affinity purification in hormone-responsive human breast cancer cell nuclei

Nassa, G., Tarallo, R., Ambrosino, C., Bamundo, A., Ferraro, L., Paris, O., Ravo, M., Guzzi, P. H., Cannataro, M., Baumann, M., Nyman, T. A., Nola, E. & Weisz, A., 2011, In : Proteomics (Weinheim). 11, p. 159-165 7 p.

Research output: Contribution to journalArticleScientificpeer-review

Analysis of myotilin turnover provides mechanistic insight into the role of myotilinopathy-causing mutations

Nandelstadh von, P., Soliymani, R., Baumann, M. & Carpen, O. M., 2011, In : Biochemical Journal. 436, p. 113-121 9 p.

Research output: Contribution to journalArticleScientificpeer-review

Comparative analysis of nuclear estrogen receptor alpha and beta interactomes in breast cancer cells

Nassa, G., Tarallo, R., Guzzi, P. H., Ferraro, L., Cirillo, F., Ravo, M., Nola, E., Baumann, M., Nyman, T. A., Cannataro, M., Ambrosino, C. & Weisz, A., 2011, In : Molecular BioSystems. 7, 3, p. 667-676 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Engineered droplets for dried droplet solute deposition by mass spectrometric imaging

Jokinen, V., Franssila, S. & Baumann, M., 2011, In : Microfluidics and Nanofluidics. 11, p. 145-156 12 p.

Research output: Contribution to journalArticleScientificpeer-review

Identification of proteins associated with ligand-activated estrogen receptor alpha in human breast cancer cell nuclei by tandem affinity purification and nano LC-MS/MS

Tarallo, R., Bamundo, A., Nassa, G., Nola, E., Paris, O., Ambrosino, C., Facchiano, A., Baumann, M., Nyman, T. A. & Weisz, A., 2011, In : Proteomics (Weinheim). 11, 1, p. 172-179 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Is coproporphyrin III a copper-acquisition compound in Paracoccus denitrificans?

Anttila, J., Heinonen, P., Nenonen, T., Pino, A., Iwai, H., Kauppi, E., Soliymani, R., Baumann, M., Saksi, J., Suni, N. & Haltia, T., 2011, In : Biochimica et Biophysica Acta. Bioenergetics. 1807, 3, p. 311-318 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Is the time ripe for kidney tissue proteomics?

Charonis, A., Luider, T., Baumann, M. & Schanstra, J. P., 2011, In : Proteomics. Clinical applications. 5, p. 215-221 7 p.

Research output: Contribution to journalArticleScientificpeer-review

Serum Amyloid A Activates the NLRP3 Inflammasome via P2X(7) Receptor and a Cathepsin B-Sensitive Pathway

Niemi, K., Teirila, L., Lappalainen, J., Rajamaki, K., Baumann, M. H., Öörni, K., Wolff, H., Kovanen, P. T., Matikainen, S. & Eklund, K. K., 2011, In : Online Journal of Immunology. 186, p. 6119-6128 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Systems biology approaches towards Neuronal ceroid lipofuscinoses interactome

Scifo, E., Mia-Lisa, S., Uusi-Rauva, K., Soliymani, R., Karjalainen, M., Kyttala, A., Baumann, M., Jalanko, A. & Lalowski, M., 2011, In : The FEBS Journal. 278, p. 151-151 1 p.

Research output: Contribution to journalArticleScientificpeer-review

2010

Calcium Gluconate in Phosphate Buffered Saline Increases Gene Delivery with Adenovirus Type 5

Ahonen, M. T., Diaconu, I., Pesonen, S., Kanerva, A., Baumann, M., Parviainen, S. T., Spiller, B., Cerullo, V. & Hemminki, A., 2010, In : PLoS One. 5, 9, p. Article Number: e13103 10 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Identification of a Hormone-regulated Dynamic Nuclear Actin Network Associated with Estrogen Receptor alpha in Human Breast Cancer Cell Nuclei

Ambrosino, C., Tarallo, R., Bamundo, A., Cuomo, D., Franci, G., Nassa, G., Paris, O., Ravo, M., Giovane, A., Zambrano, N., Lepikhova, T., Jänne, O. A., Baumann, M., Nyman, T. A., Cicatiello, L. & Weisz, A., 2010, In : Molecular & Cellular Proteomics. 9, p. 1352-1367 16 p.

Research output: Contribution to journalArticleScientificpeer-review