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Publications 2005 2019

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Conference contribution
2018

Kermit: Guided Long Read Assembly using Coloured Overlap Graphs

Walve, R. M., Rastas, P. M. A. & Salmela, L. M., 2018, 18th International Workshop on Algorithms in Bioinformatics (WABI 2018). Parida, L. & Ukkonen, E. (eds.). Dagstuhl: Schloss Dagstuhl - Leibniz-Zentrum für Informatik, p. 11:1-11:11 11 p. (Leibniz International Proceedings in Informatics (LIPIcs); vol. 113).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

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2008

Fast Bayesian haplotype inference via Context Tree Weighting

Rastas, P., Kollin, J. & Koivisto, M., 2008, Proceedings of the 8th International Workshop, WABI 2008, Karlsruhe, Germany, September 15-19, 2008. p. 259-270 12 p.

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

2007

Fast search algorithms for position specific scoring matrices

Pizzi, C., Rastas, P. & Ukkonen, E., 2007, Bioinformatics Research and Development. Springer-Verlag, p. 239-250 12 p. (Lecture Notes in Computer Science; vol. 4414).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

Haplotype inference via hierarchical genotype parsing

Rastas, P. & Ukkonen, E., 2007, Algorithms in Bioinformatics (WABI 2007). Springer-Verlag, p. 85-97 13 p. (Lecture Notes in Computer Science; vol. 4645).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review

2005

A hidden Markov technique for haplotype reconstruction

Rastas, P., Koivisto, M., Mannila, H. & Ukkonen, E., 2005, Algorithms in Bioinformatics (WABI-2005). Springer-Verlag, p. 140-151 12 p. (Lecture Notes in Computer Science; vol. 3692).

Research output: Chapter in Book/Report/Conference proceedingConference contributionScientificpeer-review