Probe set selection for targeted spatial transcriptomics

Kuemmerle, L. B., Luecken, M. D., Firsova, A. B., Andrade e Sousa, L. B. D., Strasser, L., Mekki, I. I., Campi, F., Heumos, L., Shulman, M., Beliaeva, V., Hediyeh-Zadeh, S., Schaar, A. C., Mahbubani, K. T., Sountoulidis, A., Balassa, T., Kovacs, F., Horvath, P., Piraud, M., Erturk, A. & Samakovlis, C. & 1 others, Theis, F. J., 18 Nov 2024, In: Nature methods. 32 p.

Research output: Contribution to journal › Article › Scientific › peer-review

Role of the kisspeptin-KISS1R axis in the pathogenesis of chronic kidney disease and uremic cardiomyopathy

Dinh, H., Kovács, Z. Z. A., Kis, M., Kupecz, K., Sejben, A., Szűcs, G., Márványkövi, F., Siska, A., Freiwan, M., Pósa, S. P., Galla, Z., Ibos, K. E., Bodnár, É., Lauber, G. Y., Goncalves, A. I. A., Acar, E., Kriston, A., Kovács, F., Horváth, P. & Bozsó, Z. & 11 others, Tóth, G., Földesi, I., Monostori, P., Cserni, G., Podesser, B. K., Lehoczki, A., Pokreisz, P., Kiss, A., Dux, L., Csabafi, K. & Sárközy, M., 2024, In: GeroScience. 46, p. 2463–2488 26 p.

Research output: Contribution to journal › Article › Scientific › peer-review

Segmentation metric misinterpretations in bioimage analysis

Hirling, D., Tasnadi, E., Caicedo, J., Caroprese, M. V., Sjoegren, R., Aubreville, M., Koos, K. & Horvath, P., 2024, In: Nature methods. 21, p. 213–216 8 p.

Research output: Contribution to journal › Article › Scientific › peer-review

Super CUT, an unsupervised multimodal image registration with deep learning for biomedical microscopy

Grexa, I., Iván, Z. Z., Migh, E., Kovács, F., Bolck, H. A., Zheng, X., Mund, A., Moshkov, N., Miczán, V., Koos, K. & Horvath, P., 1 Mar 2024, In: Briefings in Bioinformatics. 25, 2, 11 p., bbae029.

Research output: Contribution to journal › Article › Scientific › peer-review

An integrated cell atlas of the lung in health and disease

Sikkema, L., Ramirez-Suastegui, C., Strobl, D. C., Gillett, T. E., Zappia, L., Madissoon, E., Markov, N. S., Zaragosi, L.-E., Ji, Y., Ansari, M., Arguel, M.-J., Apperloo, L., Banchero, M., Becavin, C., Berg, M., Chichelnitskiy, E., Chung, M.-I., Collin, A., Gay, A. C. A. & Gote-Schniering, J. & 77 others, Kashani, B. H., Inecik, K., Jain, M., Kapellos, T. S., Kole, T. M., Leroy, S., Mayr, C. H., Oliver, A. J., von Papen, M., Peter, L., Taylor, C. J., Walzthoeni, T., Xu, C., Bui, L. T., De Donno, C., Dony, L., Faiz, A., Guo, M., Gutierrez, A. J., Heumos, L., Huang, N., Ibarra, I. L., Jackson, N. D., Murthy, P. K. L., Lotfollahi, M., Tabib, T., Talavera-Lopez, C., Travaglini, K. J., Wilbrey-Clark, A., Worlock, K. B., Yoshida, M., van den Berge, M., Bosse, Y., Desai, T. J., Eickelberg, O., Kaminski, N., Krasnow, M. A., Lafyatis, R., Nikolic, M. Z., Powell, J. E., Rajagopal, J., Rojas, M., Rozenblatt-Rosen, O., Seibold, M. A., Sheppard, D., Shepherd, D. P., Sin, D. D., Timens, W., Tsankov, A. M., Whitsett, J., Xu, Y., Banovich, N. E., Barbry, P., Duong, T. E., Falk, C. S., Meyer, K. B., Kropski, J. A., Pe'er, D., Schiller, H. B., Tata, P. R., Schultze, J. L., Teichmann, S. A., Misharin, A., Nawijn, M. C., Luecken, M. D., Theis, F. J., Chen, Y., Hagood, J. S., Agami, A., Horvath, P., Lundeberg, J., Marquette, C.-H., Pryhuber, G., Samakovlis, C., Sun, X., Ware, L. B. & Zhang, K., 8 Jun 2023, In: Nature Medicine. 29, 6, p. 1563–1577 47 p.

Research output: Contribution to journal › Article › Scientific › peer-review