• PL 68 (Pietari Kalmin katu 5)

    00014

    Finland

  • Finland

20122020

Research output per year

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Personal profile

Fields of Science

  • 113 Computer and information sciences

International and National Collaboration Publications and projects within past five years.

Publications

Fast and accurate correction of optical mapping data via spaced seeds

Salmela, L., Mukherjee, K., Puglisi, S. J., Muggli, M. D. & Boucher, C., 1 Feb 2020, In : Bioinformatics. 36, 3, p. 682-689 8 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File

Fast Indexes for Gapped Pattern Matching

Cáceres, M., Puglisi, S. & Zhukova, B., 17 Jan 2020, p. 493-504. 12 p.

Research output: Conference materialsPaper

Tight Upper and Lower Bounds on Suffix Tree Breadth

Badkobeh, G., Gawrychowski, P., Kärkkäinen, J., Puglisi, S. & Zhukova, B., 23 Jan 2020, (Accepted/In press) In : Theoretical Computer Science.

Research output: Contribution to journalArticleScientificpeer-review

Fixed Block Compression Boosting in FM-Indexes: Theory and Practice

Gog, S., Kärkkäinen, J., Kempa, D., Petri, M. & Puglisi, S. J., Apr 2019, In : Algorithmica. 81, 4, p. 1370-1391 22 p.

Research output: Contribution to journalArticleScientificpeer-review

File

Kohdista: An efficient method to index and query possible Rmap alignments: Algorithms for Molecular Biology

Muggli, M. D., Puglisi, S. J. & Boucher, C., 2019, In : Algorithms for Molecular Biology. 14, 1, 25.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File

Activities

  • 13 Organisation and participation in conferences, workshops, courses, seminars
  • 12 Academic visit at UH
  • 9 Academic visit to other institution

University of Melbourne

Simon Puglisi (Visiting researcher)
25 Nov 201922 Dec 2019

Activity: Visiting an external institution typesAcademic visit to other institution

Manuel Cáceres

Simon Puglisi (Host)
16 Sep 20189 Nov 2018

Activity: Hosting a visitor typesAcademic visit at UH

Massimiliano Rossi

Simon Puglisi (Host)
28 Apr 201830 Sep 2018

Activity: Hosting a visitor typesAcademic visit at UH

Hideo Bannai

Simon Puglisi (Host)
2 Mar 201513 Mar 2015

Activity: Hosting a visitor typesAcademic visit at UH

King's College London

Simon Puglisi (Visiting researcher)
23 Mar 201512 May 2015

Activity: Visiting an external institution typesAcademic visit to other institution