Research output per year
Research output per year
Personal profile
Fields of Science
- 113 Computer and information sciences
Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Batched k-mer lookup on the Spectral Burrows-Wheeler Transform
Alanko, J., Biagi, E., Mackenzie, J. & Puglisi, S., 7 Jan 2025, 2025 Proceedings of the Symposium on Algorithm Engineering and Experiments (ALENEX). Chowdhury, R., Berry, J., Hanauer, K. & Ren, B. (eds.). Society for Industrial and Applied Mathematics, p. 95 - 106 12 p. ( Proceedings of the Workshop on Algorithm Engineering and Experiments).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
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Compressed Dictionary Matching on Run-Length Encoded Strings
Bille, P., Gørtz, I. L., Puglisi, S. J. & Tarnow, S. R., 10 Jun 2025, 36th Annual Symposium on Combinatorial Pattern Matching, CPM 2025. Bonizzoni, P. & Makinen, V. (eds.). Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing, 21. (Leibniz International Proceedings in Informatics, LIPIcs; vol. 331).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
Open AccessFile -
Finimizers: Variable-Length Bounded-Frequency Minimizers for k-mer Sets
Alanko, J. N., Biagi, E. & Puglisi, S. J., 2025, In: IEEE/ACM Transactions on Computational Biology and Bioinformatics. 22, 2, p. 899-910 12 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Height-Bounded Lempel-Ziv Encodings
Bannai, H., Funakoshi, M., Hendrian, D., Matsuda, M. & Puglisi, S. J., Sept 2024, 32nd Annual European Symposium on Algorithms, ESA 2024. Chan, T., Fischer, J., Iacono, J. & Herman, G. (eds.). Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing, 18. (Leibniz International Proceedings in Informatics, LIPIcs; vol. 308).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › Scientific › peer-review
Open AccessFile -
Suffix sorting via matching statistics
Lipták, Z., Masillo, F. & Puglisi, S. J., 12 Mar 2024, In: Algorithms for Molecular Biology. 19, 1, 18 p., 11.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile
Projects
- 1 Active
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WILL # CHAIR # BOSSA
Puglisi, S. (Project manager)
ET P Universite de Lille 1 Laboratore d'Oceanologie et de Geos Luczak Christophe
01/06/2025 → 31/05/2029
Project: Other funder
Prizes
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Alberto Apostolico Best Paper Award
Puglisi, S. (Recipient), Raman, R. (Recipient), Belazzougui, D. (Recipient) & Kosolobov, D. (Recipient), 6 Jul 2021
Prize: Prizes and awards
Activities
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46th International Symposium on Mathematical Foundations of Computer Science (Event)
Puglisi, S. (Programme Committee Chair)
23 Aug 2021 → 27 Aug 2021Activity: Publication peer-review and editorial work types › Editor of research anthology/collection/conference proceedings
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University of Melbourne
Puglisi, S. (Visiting researcher)
25 Nov 2019 → 22 Dec 2019Activity: Visiting an external institution types › Academic visit to other institution
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Massimiliano Rossi
Puglisi, S. (Host)
28 Apr 2018 → 30 Sept 2018Activity: Hosting a visitor types › Academic visit at UH
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Manuel Cáceres
Puglisi, S. (Host)
16 Sept 2018 → 9 Nov 2018Activity: Hosting a visitor types › Academic visit at UH
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22nd Symposium on String Processing and Information Retrieval (SPIRE)
Puglisi, S. (Scientific Committee Chair)
1 Sept 2015 → 3 Sept 2015Activity: Participating in or organising an event types › Organisation and participation in conferences, workshops, courses, seminars