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Teemu Kivioja

  • Viikinkaari 5, Biocenter 2

    00790 Helsinki

    Finland

20002018

Research output per year

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Personal profile

Fields of Science

  • 113 Computer and information sciences

International and National Collaboration Publications and projects within past five years.

Publications

A protein activity assay to measure global transcription factor activity reveals determinants of chromatin accessibility

Wei, B., Jolma, A., Sahu, B., Orre, L. M., Zhong, F., Zhu, F., Kivioja, T., Sur, I., Lehtiö, J., Taipale, M. & Taipale, J., Jun 2018, In : Nature Biotechnology. 36, 6, p. 521-+ 13 p.

Research output: Contribution to journalArticleScientificpeer-review

Contribution of allelic imbalance to colorectal cancer

Palin, K., Pitkänen, E., Turunen, M., Sahu, B., Pihlajamaa, P., Kivioja, T., Kaasinen, E., Välimäki, N., Hänninen, U. A., Cajuso, T., Aavikko, M., Tuupanen, S., Kilpivaara, O., van den Berg, L., Kondelin, J., Tanskanen, T., Katainen, R., Grau, M., Rauanheimo, H., Plaketti, R-M. & 20 others, Taira, A., Sulo, P., Hartonen, T., Dave, K., Schmierer, B., Botla, S., Sokolova, M., Vähärautio, A., Gladysz, K., Ongen, H., Dermitzakis, E., Bramsen, J. B., Orntoft, T. F., Andersen, C. L., Ristimäki, A., Lepistö, A., Renkonen-Sinisalo, L., Mecklin, J-P., Taipale, J. & Aaltonen, L. A., 10 Sep 2018, In : Nature Communications. 9, 9 p., 3664.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Modular discovery of monomeric and dimeric transcription factor binding motifs for large data sets

Toivonen, J., Kivioja, T., Jolma, A., Yin, Y., Taipale, J. & Ukkonen, E., 4 May 2018, In : Nucleic Acids Research. 46, 8, 16 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
File

CRISPR/Cas9 screening using unique molecular identifiers

Schmierer, B., Botla, S. K., Zhang, J., Turunen, M., Kivioja, T. & Taipale, J., Oct 2017, In : Molecular Systems Biology. 13, 10, 8 p., 945.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Genome-wide screen of cell-cycle regulators in normal and tumor cells identifies a differential response to nucleosome depletion

Sokolova, M., Turunen, M., Mortusewicz, O., Kivioja, T., Herr, P., Vähärautio, A., Björklund, M., Taipale, M., Helleday, T. & Taipale, J., 2017, In : Cell Cycle. 16, 2, p. 189-199 11 p.

Research output: Contribution to journalArticleScientificpeer-review

Open Access
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Activities

  • 1 Peer review of manuscripts

IEEE/ACM Transactions on Computational Biology and Bioinformatics (Journal)

Teemu Kivioja (Reviewer)
2010 → …

Activity: Publication peer-review and editorial work typesPeer review of manuscripts