Research output per year
Research output per year
Personal profile
Education/Academic qualification
Applied Mathematics, PhD, University of Turku
Award Date: 12 Aug 2001
External positions
Professor of Statistics and Applied Mathematics, University of Turku
1 Aug 2015 → …
Fields of Science
- 3111 Biomedicine
- Computational systems medicine
- 111 Mathematics
- Mathematical modeling
- Biomathematics
- 113 Computer and information sciences
- Data mining
- Bioinformatics
- 112 Statistics and probability
- Biostatistics
International and National Collaboration
Publications and projects within past five years.
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Artificial intelligence for drug response prediction in disease models
Ballester, P. J., Stevens, R., Haibe-Kains, B., Huang, R. S. & Aittokallio, T., 17 Jan 2022, In: Briefings in Bioinformatics. 23, 1, 3 p., 450.Research output: Contribution to journal › Editorial › Scientific › peer-review
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Evaluation of statistical approaches for association testing in noisy drug screening data
Smirnov, P., Smith, I., Safikhani, Z., Ba-alawi, W., Khodakarami, F., Lin, E., Yu, Y., Martin, S., Ortmann, J., Aittokallio, T., Hafner, M. & Haibe-Kains, B., 18 May 2022, In: BMC Bioinformatics. 23, 1, 24 p., 188.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Fully-automated and ultra-fast cell-type identification using specific marker combinations from single-cell transcriptomic data
Ianevski, A., Giri, A. K. & Aittokallio, T., 10 Mar 2022, In: Nature Communications. 13, 10 p., 1246.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
Implementing a Functional Precision Medicine Tumor Board for Acute Myeloid Leukemia
Malani, D., Kumar, A., Brück, O., Kontro, M., Yadav, B., Hellesoy, M., Kuusanmäki, H., Dufva, O., Kankainen, M., Eldfors, S., Potdar, S., Saarela, J., Turunen, L., Parsons, A., Västrik, I., Kivinen, K., Saarela, J., Räty, R., Lehto, M., Wolf, M. & 7 others, , Feb 2022, In: Cancer Discovery. 12, 2, p. 388-401 14 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile -
SynergyFinder 3.0: an interactive analysis and consensus interpretation of multi-drug synergies across multiple samples
Ianevski, A., Giri, A. K. & Aittokallio, T., 5 Jul 2022, In: Nucleic Acids Research. 50, W1, p. W739-W743 5 p.Research output: Contribution to journal › Article › Scientific › peer-review
Open AccessFile
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Elucidation of mechanisms of action of the natural stilbenoid pinosylvin via network pharmacology computational methods
Kibble, M. M., Aittokallio, T., Mäkelä, S., Saarinen, N. & Martinez Chacon , G.
01/01/2014 → …
Project: Research project
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Predicting disease specific effects and mechanisms of action of compound combinations in phytotherapy
Kibble, M. M., Aittokallio, T., Tang, J., Sultan Khan, S. & Peddinti, G.
18/05/2015 → 18/12/2017
Project: Research project
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Personalizing health and care - creating medically-driven integrative bioinformatics applications focused on oncology, CNS disorders and their comorbidities
01/05/2015 → 30/04/2017
Project: Research project
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Cancer society of Finland - Individualized drug target combinations: prediction, testing and translation
Tang, J., Aittokallio, T. & Wennerberg, K.
01/01/2015 → 31/12/2016
Project: Research project
Prizes
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Helsinki Challenge
Tang, Jing (Recipient), Kurki, S. (Recipient), Aittokallio, Tero (Recipient), Andersson, Emma I (Recipient), Kulesskiy, Evgeny (Recipient), Kumar, A. (Recipient), Tsallos, Dimitrios (Recipient), Majumder, M. (Recipient), Dufva, Olli (Recipient) & Keränen, M. (Recipient), 22 Nov 2017
Prize: Prizes and awards
Activities
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Computational analyses of small molecules activity from phenotypic screens
Tero Aittokallio (Supervisor)
8 Jan 2019Activity: Examination types › Pre-examiner of doctoral thesis
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Modeling and prediction of advanced prostate cancer
Tero Aittokallio (Supervisor)
16 Nov 2018Activity: Examination types › Supervisor or co-supervisor of doctoral thesis
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Bioinformatics analysis of intron retention events associated with the minor spliceosome
Tero Aittokallio (Supervisor)
Oct 2018Activity: Examination types › Pre-examiner of doctoral thesis
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Machine Learning for Systems Pharmacology
Tero Aittokallio (Supervisor)
5 Oct 2018Activity: Examination types › Supervisor or co-supervisor of doctoral thesis
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University of Toronto
Tero Aittokallio (Visiting researcher)
28 Feb 2018 → 26 Apr 2018Activity: Visiting an external institution types › Academic visit to other institution
Press / Media
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Finnish AI solution helps medical staff kill cancer cells
22/12/2020
1 item of Media coverage
Press/Media: Press / Media
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Researchers develop new model to suggest new method to kill cancer cells
06/12/2020
4 items of Media coverage
Press/Media: Press / Media
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Machine Learning Model Predicts Which Drug Combinations Kill Cancer Cells
02/12/2020
2 items of Media coverage
Press/Media: Press / Media
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AI predicts which drug combinations kill cancer cells
01/12/2020 → 02/12/2020
12 items of Media coverage
Press/Media: Press / Media
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