Tero Aittokallio

Helsinki Institute for Information Technology
Bioinformatics
Senior Researcher, Institute for Molecular Medicine Finland
Supervisor for doctoral programme, Doctoral Programme in Biomedicine
Supervisor for doctoral programme, Doctoral Programme in Clinical Research
Supervisor for doctoral programme, Doctoral Programme in Drug Research
Supervisor for doctoral programme, Doctoral Programme in Integrative Life Science

https://orcid.org/0000-0002-0886-9769

Phone+358503182426, +358294125831
Emailtero.aittokallio@helsinki.fi

Finland
PL 20 (Tukholmankatu 8)
00014
Finland
Viikinkaari 5, Biocenter 2
00790 Helsinki
Finland

Research output per year

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Personal profile

Education/Academic qualification

Applied Mathematics, PhD, University of Turku

Award Date: 12 Aug 2001

External positions

Professor of Statistics and Applied Mathematics, University of Turku

1 Aug 2015 → …

Fields of Science

3111 Biomedicine
Computational systems medicine
111 Mathematics
Mathematical modeling
Biomathematics
113 Computer and information sciences
Data mining
Bioinformatics
112 Statistics and probability
Biostatistics

International and National Collaboration

Publications and projects within past five years.

111 Article
10 Review Article
9 Meeting Abstract
3 Chapter
5 More

A normalized drug response metric improves accuracy and consistency of anticancer drug sensitivity quantification in cell-based screening
Gupta, A., Gautam, P., Wennerberg, K. & Aittokallio, T., 23 Jan 2020, In : Communications Biology. 3, 1, 12 p., 42.
Research output: Contribution to journal › Article › Scientific › peer-review

Open Access
File
A relational database to identify differentially expressed genes in the endometrium and endometriosis lesions
Gabriel, M., Fey, V., Heinosalo, T., Adhikari, P., Rytkönen, K., Komulainen, T., Huhtinen, K., Laajala, T. D., Siitari, H., Virkki, A., Suvitie, P., Kujari, H., Aittokallio, T., Perheentupa, A. & Poutanen, M., 28 Aug 2020, In : Scientific data . 7, 13 p., 284.
Research output: Contribution to journal › Article › Scientific › peer-review

Open Access
File
Breeze: an integrated quality control and data analysis application for high-throughput drug screening
Potdar, S., Ianevski, A., Mpindi, J-P., Bychkov, D., Fiere, C., Ianevski, P., Yadav, B., Wennerberg, K., Aittokallio, T., Kallioniemi, O., Saarela, J. & Östling, P., Jun 2020, In : Bioinformatics. 36, 11, p. 3602-3604 3 p.
Research output: Contribution to journal › Article › Scientific › peer-review

Open Access
File
Cost-effective survival prediction for patients with advanced prostate cancer using clinical trial and real-world hospital registry datasets
Murtojärvi, M., Halkola, A. S., Airola, A., Laajala, T. D., Mirtti, T., Aittokallio, T. & Pahikkala, T., Jan 2020, In : International Journal of Medical Informatics. 133, 8 p., 104014.
Research output: Contribution to journal › Article › Scientific › peer-review

Open Access
File
Genetic and functional implications of an exonic TRIM55 variant in heart failure
Heliste, J., Chheda, H., Paatero, I., Salminen, T. A., Akimov, Y., Paavola, J., Elenius, K. & Aittokallio, T., Jan 2020, In : Journal of Molecular and Cellular Cardiology. 138, p. 222-233 12 p.
Research output: Contribution to journal › Article › Scientific › peer-review

1 Active
13 Finished

Elucidation of mechanisms of action of the natural stilbenoid pinosylvin via network pharmacology computational methods
Kibble, M. M., Aittokallio, T., Mäkelä, S., Saarinen, N. & Martinez Chacon , G.
01/01/2014 → …
Project: Research project
Predicting disease specific effects and mechanisms of action of compound combinations in phytotherapy
Kibble, M. M., Aittokallio, T., Tang, J., Sultan Khan, S. & Peddinti, G.
18/05/2015 → 18/12/2017
Project: Research project
Personalizing health and care - creating medically-driven integrative bioinformatics applications focused on oncology, CNS disorders and their comorbidities
Aittokallio, T. & Tang, J.
01/05/2015 → 30/04/2017
Project: Research project
Creating medically-driven integrative bioinformatics applications focused on oncology, CNS disorders and their comorbidities (MedBioinformatics)
Aittokallio, T.
European Commission / Horizon 2020
01/05/2015 → 30/04/2018
Project: Research project
Cancer society of Finland - Individualized drug target combinations: prediction, testing and translation
Tang, J., Aittokallio, T. & Wennerberg, K.
01/01/2015 → 31/12/2016
Project: Research project

Helsinki Challenge
Tang, Jing (Recipient), Samu Kurki (Recipient), Aittokallio, Tero (Recipient), Andersson, Emma I. (Recipient), Kulesskiy, Evgeny (Recipient), Ashwini Kumar (Recipient), Tsallos, Dimitrios (Recipient), Majumder, Muntasir (Recipient), Dufva, Olli (Recipient) & Mikko Keränen (Recipient), 22 Nov 2017
Prize: Prizes and awards

7 Pre-examiner of doctoral thesis
2 Supervisor or co-supervisor of doctoral thesis
1 Public Talks
1 Academic visit at UH
2 More
- 1 Membership or other role in research network
- 1 Academic visit to other institution

Computational analyses of small molecules activity from phenotypic screens
Tero Aittokallio (Supervisor)
8 Jan 2019
Activity: Examination types › Pre-examiner of doctoral thesis
Machine Learning for Systems Pharmacology
Tero Aittokallio (Supervisor)
5 Oct 2018
Activity: Examination types › Supervisor or co-supervisor of doctoral thesis
Modeling and prediction of advanced prostate cancer
Tero Aittokallio (Supervisor)
16 Nov 2018
Activity: Examination types › Supervisor or co-supervisor of doctoral thesis
University of Toronto
Tero Aittokallio (Visiting researcher)
28 Feb 2018 → 26 Apr 2018
Activity: Visiting an external institution types › Academic visit to other institution
Bioinformatics analysis of intron retention events associated with the minor spliceosome
Tero Aittokallio (Supervisor)
Oct 2018
Activity: Examination types › Pre-examiner of doctoral thesis