A reference panel of 64,976 haplotypes for genotype imputation

Shane McCarthy, Sayantan Das, Warren Kretzschmar, Olivier Delaneau, Andrew R. Wood, Alexander Teumer, Hyun Min Kang, Christian Fuchsberger, Petr Danecek, Kevin Sharp, Yang Luo, Carlo Sidorel, Alan Kwong, Nicholas Timpson, Seppo Koskinen, Scott Vrieze, Laura J. Scott, He Zhang, Anubha Mahajan, Jan VeldinkUlrike Peters, Carlos Pato, Cornelia M. van Duijn, Christopher E. Gillies, Ilaria Gandin, Massimo Mezzavilla, Arthur Gilly, Massimiliano Cocca, Michela Traglia, Andrea Angius, Jeffrey C. Barrett, Dorrett Boomsma, Kari Branham, Gerome Breen, Chad M. Brummett, Fabio Busonero, Harry Campbell, Andrew Chan, Sai Che, Emily Chew, Francis S. Collins, Laura J. Corbin, George Davey Smith, George Dedoussis, Marcus Dorr, Aliki-Eleni Farmaki, Luigi Ferrucci, Leif Groop, Aarno Palotie, Samuli Ripatti, Haplotype Reference Consortium

Research output: Contribution to journalArticleScientificpeer-review

Original languageEnglish
JournalNature Genetics
Volume48
Issue number10
Pages (from-to)1279-1283
Number of pages5
ISSN1061-4036
DOIs
Publication statusPublished - Oct 2016
MoE publication typeA1 Journal article-refereed

Fields of Science

  • GENOME-WIDE ASSOCIATION
  • RARE VARIANTS
  • POPULATION
  • SEQUENCE
  • 1184 Genetics, developmental biology, physiology
  • 3111 Biomedicine

Cite this

McCarthy, S., Das, S., Kretzschmar, W., Delaneau, O., Wood, A. R., Teumer, A., ... Haplotype Reference Consortium (2016). A reference panel of 64,976 haplotypes for genotype imputation. Nature Genetics, 48(10), 1279-1283. https://doi.org/10.1038/ng.3643
McCarthy, Shane ; Das, Sayantan ; Kretzschmar, Warren ; Delaneau, Olivier ; Wood, Andrew R. ; Teumer, Alexander ; Kang, Hyun Min ; Fuchsberger, Christian ; Danecek, Petr ; Sharp, Kevin ; Luo, Yang ; Sidorel, Carlo ; Kwong, Alan ; Timpson, Nicholas ; Koskinen, Seppo ; Vrieze, Scott ; Scott, Laura J. ; Zhang, He ; Mahajan, Anubha ; Veldink, Jan ; Peters, Ulrike ; Pato, Carlos ; van Duijn, Cornelia M. ; Gillies, Christopher E. ; Gandin, Ilaria ; Mezzavilla, Massimo ; Gilly, Arthur ; Cocca, Massimiliano ; Traglia, Michela ; Angius, Andrea ; Barrett, Jeffrey C. ; Boomsma, Dorrett ; Branham, Kari ; Breen, Gerome ; Brummett, Chad M. ; Busonero, Fabio ; Campbell, Harry ; Chan, Andrew ; Che, Sai ; Chew, Emily ; Collins, Francis S. ; Corbin, Laura J. ; Smith, George Davey ; Dedoussis, George ; Dorr, Marcus ; Farmaki, Aliki-Eleni ; Ferrucci, Luigi ; Groop, Leif ; Palotie, Aarno ; Ripatti, Samuli ; Haplotype Reference Consortium. / A reference panel of 64,976 haplotypes for genotype imputation. In: Nature Genetics. 2016 ; Vol. 48, No. 10. pp. 1279-1283.
@article{cb3e6845426149cc9b4401ff23a38948,
title = "A reference panel of 64,976 haplotypes for genotype imputation",
keywords = "GENOME-WIDE ASSOCIATION, RARE VARIANTS, POPULATION, SEQUENCE, 1184 Genetics, developmental biology, physiology, 3111 Biomedicine",
author = "Shane McCarthy and Sayantan Das and Warren Kretzschmar and Olivier Delaneau and Wood, {Andrew R.} and Alexander Teumer and Kang, {Hyun Min} and Christian Fuchsberger and Petr Danecek and Kevin Sharp and Yang Luo and Carlo Sidorel and Alan Kwong and Nicholas Timpson and Seppo Koskinen and Scott Vrieze and Scott, {Laura J.} and He Zhang and Anubha Mahajan and Jan Veldink and Ulrike Peters and Carlos Pato and {van Duijn}, {Cornelia M.} and Gillies, {Christopher E.} and Ilaria Gandin and Massimo Mezzavilla and Arthur Gilly and Massimiliano Cocca and Michela Traglia and Andrea Angius and Barrett, {Jeffrey C.} and Dorrett Boomsma and Kari Branham and Gerome Breen and Brummett, {Chad M.} and Fabio Busonero and Harry Campbell and Andrew Chan and Sai Che and Emily Chew and Collins, {Francis S.} and Corbin, {Laura J.} and Smith, {George Davey} and George Dedoussis and Marcus Dorr and Aliki-Eleni Farmaki and Luigi Ferrucci and Leif Groop and Aarno Palotie and Samuli Ripatti and {Haplotype Reference Consortium}",
year = "2016",
month = "10",
doi = "10.1038/ng.3643",
language = "English",
volume = "48",
pages = "1279--1283",
journal = "Nature Genetics",
issn = "1061-4036",
publisher = "Nature Publishing Group",
number = "10",

}

McCarthy, S, Das, S, Kretzschmar, W, Delaneau, O, Wood, AR, Teumer, A, Kang, HM, Fuchsberger, C, Danecek, P, Sharp, K, Luo, Y, Sidorel, C, Kwong, A, Timpson, N, Koskinen, S, Vrieze, S, Scott, LJ, Zhang, H, Mahajan, A, Veldink, J, Peters, U, Pato, C, van Duijn, CM, Gillies, CE, Gandin, I, Mezzavilla, M, Gilly, A, Cocca, M, Traglia, M, Angius, A, Barrett, JC, Boomsma, D, Branham, K, Breen, G, Brummett, CM, Busonero, F, Campbell, H, Chan, A, Che, S, Chew, E, Collins, FS, Corbin, LJ, Smith, GD, Dedoussis, G, Dorr, M, Farmaki, A-E, Ferrucci, L, Groop, L, Palotie, A, Ripatti, S & Haplotype Reference Consortium 2016, 'A reference panel of 64,976 haplotypes for genotype imputation', Nature Genetics, vol. 48, no. 10, pp. 1279-1283. https://doi.org/10.1038/ng.3643

A reference panel of 64,976 haplotypes for genotype imputation. / McCarthy, Shane; Das, Sayantan; Kretzschmar, Warren; Delaneau, Olivier; Wood, Andrew R.; Teumer, Alexander; Kang, Hyun Min; Fuchsberger, Christian; Danecek, Petr; Sharp, Kevin; Luo, Yang; Sidorel, Carlo; Kwong, Alan; Timpson, Nicholas; Koskinen, Seppo; Vrieze, Scott; Scott, Laura J.; Zhang, He; Mahajan, Anubha; Veldink, Jan; Peters, Ulrike; Pato, Carlos; van Duijn, Cornelia M.; Gillies, Christopher E.; Gandin, Ilaria; Mezzavilla, Massimo; Gilly, Arthur; Cocca, Massimiliano; Traglia, Michela; Angius, Andrea; Barrett, Jeffrey C.; Boomsma, Dorrett; Branham, Kari; Breen, Gerome; Brummett, Chad M.; Busonero, Fabio; Campbell, Harry; Chan, Andrew; Che, Sai; Chew, Emily; Collins, Francis S.; Corbin, Laura J.; Smith, George Davey; Dedoussis, George; Dorr, Marcus; Farmaki, Aliki-Eleni; Ferrucci, Luigi; Groop, Leif; Palotie, Aarno; Ripatti, Samuli; Haplotype Reference Consortium.

In: Nature Genetics, Vol. 48, No. 10, 10.2016, p. 1279-1283.

Research output: Contribution to journalArticleScientificpeer-review

TY - JOUR

T1 - A reference panel of 64,976 haplotypes for genotype imputation

AU - McCarthy, Shane

AU - Das, Sayantan

AU - Kretzschmar, Warren

AU - Delaneau, Olivier

AU - Wood, Andrew R.

AU - Teumer, Alexander

AU - Kang, Hyun Min

AU - Fuchsberger, Christian

AU - Danecek, Petr

AU - Sharp, Kevin

AU - Luo, Yang

AU - Sidorel, Carlo

AU - Kwong, Alan

AU - Timpson, Nicholas

AU - Koskinen, Seppo

AU - Vrieze, Scott

AU - Scott, Laura J.

AU - Zhang, He

AU - Mahajan, Anubha

AU - Veldink, Jan

AU - Peters, Ulrike

AU - Pato, Carlos

AU - van Duijn, Cornelia M.

AU - Gillies, Christopher E.

AU - Gandin, Ilaria

AU - Mezzavilla, Massimo

AU - Gilly, Arthur

AU - Cocca, Massimiliano

AU - Traglia, Michela

AU - Angius, Andrea

AU - Barrett, Jeffrey C.

AU - Boomsma, Dorrett

AU - Branham, Kari

AU - Breen, Gerome

AU - Brummett, Chad M.

AU - Busonero, Fabio

AU - Campbell, Harry

AU - Chan, Andrew

AU - Che, Sai

AU - Chew, Emily

AU - Collins, Francis S.

AU - Corbin, Laura J.

AU - Smith, George Davey

AU - Dedoussis, George

AU - Dorr, Marcus

AU - Farmaki, Aliki-Eleni

AU - Ferrucci, Luigi

AU - Groop, Leif

AU - Palotie, Aarno

AU - Ripatti, Samuli

AU - Haplotype Reference Consortium

PY - 2016/10

Y1 - 2016/10

KW - GENOME-WIDE ASSOCIATION

KW - RARE VARIANTS

KW - POPULATION

KW - SEQUENCE

KW - 1184 Genetics, developmental biology, physiology

KW - 3111 Biomedicine

U2 - 10.1038/ng.3643

DO - 10.1038/ng.3643

M3 - Article

VL - 48

SP - 1279

EP - 1283

JO - Nature Genetics

JF - Nature Genetics

SN - 1061-4036

IS - 10

ER -

McCarthy S, Das S, Kretzschmar W, Delaneau O, Wood AR, Teumer A et al. A reference panel of 64,976 haplotypes for genotype imputation. Nature Genetics. 2016 Oct;48(10):1279-1283. https://doi.org/10.1038/ng.3643