Assessing allele-specific expression across multiple tissues from RNA-seq read data

Matti Pirinen, Tuuli Lappalainen, Noah A. Zaitlen, Emmanouil T. Dermitzakis, Peter Donnelly, Mark I. McCarthy, Manuel A. Rivas, GTEx Consortium

Research output: Contribution to journalArticleScientificpeer-review

Original languageEnglish
JournalBioinformatics
Volume31
Issue number15
Pages (from-to)2497-2504
Number of pages8
ISSN1367-4803
DOIs
Publication statusPublished - 1 Aug 2015
MoE publication typeA1 Journal article-refereed

Fields of Science

  • GENE-EXPRESSION
  • STATISTICAL FRAMEWORK
  • TRANSCRIPTOME
  • VARIANTS
  • ASSOCIATION
  • DISEASE
  • EQTL
  • 3111 Biomedicine
  • 318 Medical biotechnology
  • 113 Computer and information sciences

Cite this

Pirinen, M., Lappalainen, T., Zaitlen, N. A., Dermitzakis, E. T., Donnelly, P., McCarthy, M. I., ... GTEx Consortium (2015). Assessing allele-specific expression across multiple tissues from RNA-seq read data. Bioinformatics, 31(15), 2497-2504. https://doi.org/10.1093/bioinformatics/btv074
Pirinen, Matti ; Lappalainen, Tuuli ; Zaitlen, Noah A. ; Dermitzakis, Emmanouil T. ; Donnelly, Peter ; McCarthy, Mark I. ; Rivas, Manuel A. ; GTEx Consortium. / Assessing allele-specific expression across multiple tissues from RNA-seq read data. In: Bioinformatics. 2015 ; Vol. 31, No. 15. pp. 2497-2504.
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author = "Matti Pirinen and Tuuli Lappalainen and Zaitlen, {Noah A.} and Dermitzakis, {Emmanouil T.} and Peter Donnelly and McCarthy, {Mark I.} and Rivas, {Manuel A.} and {GTEx Consortium}",
year = "2015",
month = "8",
day = "1",
doi = "10.1093/bioinformatics/btv074",
language = "English",
volume = "31",
pages = "2497--2504",
journal = "Bioinformatics",
issn = "1367-4803",
publisher = "Oxford University Press",
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Pirinen, M, Lappalainen, T, Zaitlen, NA, Dermitzakis, ET, Donnelly, P, McCarthy, MI, Rivas, MA & GTEx Consortium 2015, 'Assessing allele-specific expression across multiple tissues from RNA-seq read data', Bioinformatics, vol. 31, no. 15, pp. 2497-2504. https://doi.org/10.1093/bioinformatics/btv074

Assessing allele-specific expression across multiple tissues from RNA-seq read data. / Pirinen, Matti; Lappalainen, Tuuli; Zaitlen, Noah A.; Dermitzakis, Emmanouil T.; Donnelly, Peter; McCarthy, Mark I.; Rivas, Manuel A.; GTEx Consortium.

In: Bioinformatics, Vol. 31, No. 15, 01.08.2015, p. 2497-2504.

Research output: Contribution to journalArticleScientificpeer-review

TY - JOUR

T1 - Assessing allele-specific expression across multiple tissues from RNA-seq read data

AU - Pirinen, Matti

AU - Lappalainen, Tuuli

AU - Zaitlen, Noah A.

AU - Dermitzakis, Emmanouil T.

AU - Donnelly, Peter

AU - McCarthy, Mark I.

AU - Rivas, Manuel A.

AU - GTEx Consortium

PY - 2015/8/1

Y1 - 2015/8/1

KW - GENE-EXPRESSION

KW - STATISTICAL FRAMEWORK

KW - TRANSCRIPTOME

KW - VARIANTS

KW - ASSOCIATION

KW - DISEASE

KW - EQTL

KW - 3111 Biomedicine

KW - 318 Medical biotechnology

KW - 113 Computer and information sciences

U2 - 10.1093/bioinformatics/btv074

DO - 10.1093/bioinformatics/btv074

M3 - Article

VL - 31

SP - 2497

EP - 2504

JO - Bioinformatics

JF - Bioinformatics

SN - 1367-4803

IS - 15

ER -

Pirinen M, Lappalainen T, Zaitlen NA, Dermitzakis ET, Donnelly P, McCarthy MI et al. Assessing allele-specific expression across multiple tissues from RNA-seq read data. Bioinformatics. 2015 Aug 1;31(15):2497-2504. https://doi.org/10.1093/bioinformatics/btv074