Detection of subclonal L1 transductions in colorectal cancer by long-distance inverse-PCR and Nanopore sequencing

Research output: Contribution to journalArticleScientificpeer-review

Original languageEnglish
Article number14521
JournalScientific Reports
Volume7
Number of pages12
ISSN2045-2322
DOIs
Publication statusPublished - 6 Nov 2017
MoE publication typeA1 Journal article-refereed

Fields of Science

  • SOMATIC RETROTRANSPOSITION
  • LINE-1 RETROTRANSPOSITION
  • MECHANISM
  • POLYADENYLATION
  • POPULATION
  • INSERTIONS
  • LANDSCAPE
  • GENOMES
  • ATLAS
  • RNA
  • TTC28
  • mobile DNA
  • 3111 Biomedicine

Cite this

@article{76967a9ca5f24134814d1fa1aef1180c,
title = "Detection of subclonal L1 transductions in colorectal cancer by long-distance inverse-PCR and Nanopore sequencing",
keywords = "SOMATIC RETROTRANSPOSITION, LINE-1 RETROTRANSPOSITION, MECHANISM, POLYADENYLATION, POPULATION, INSERTIONS, LANDSCAPE, GENOMES, ATLAS, RNA, TTC28, mobile DNA, 3111 Biomedicine",
author = "Barun Pradhan and Tatiana Cajuso and Riku Katainen and Paivi Sulo and Tomas Tanskanen and Outi Kilpivaara and Esa Pitkanen and Aaltonen, {Lauri A.} and Liisa Kauppi and Kimmo Palin",
year = "2017",
month = "11",
day = "6",
doi = "10.1038/s41598-017-15076-3",
language = "English",
volume = "7",
journal = "Scientific Reports",
issn = "2045-2322",
publisher = "Nature Publishing Group",

}

TY - JOUR

T1 - Detection of subclonal L1 transductions in colorectal cancer by long-distance inverse-PCR and Nanopore sequencing

AU - Pradhan, Barun

AU - Cajuso, Tatiana

AU - Katainen, Riku

AU - Sulo, Paivi

AU - Tanskanen, Tomas

AU - Kilpivaara, Outi

AU - Pitkanen, Esa

AU - Aaltonen, Lauri A.

AU - Kauppi, Liisa

AU - Palin, Kimmo

PY - 2017/11/6

Y1 - 2017/11/6

KW - SOMATIC RETROTRANSPOSITION

KW - LINE-1 RETROTRANSPOSITION

KW - MECHANISM

KW - POLYADENYLATION

KW - POPULATION

KW - INSERTIONS

KW - LANDSCAPE

KW - GENOMES

KW - ATLAS

KW - RNA

KW - TTC28

KW - mobile DNA

KW - 3111 Biomedicine

U2 - 10.1038/s41598-017-15076-3

DO - 10.1038/s41598-017-15076-3

M3 - Article

VL - 7

JO - Scientific Reports

JF - Scientific Reports

SN - 2045-2322

M1 - 14521

ER -