Formalizing Invertebrate Morphological Data: A Descriptive Model for Cuticle-Based Skeleto-Muscular Systems, an Ontology for Insect Anatomy, and their Potential Applications in Biodiversity Research and Informatics

Jennifer C Girón; Sergei Tarasov; Luis Antonio González Montaña; Nicolas Matentzoglu; Aaron D Smith; Markus Koch; Brendon E Boudinot; Patrice Bouchard; Roger Burks; Lars Vogt; Matthew Yoder; David Osumi-Sutherland; Frank Friedrich; Rolf Beutel; István Mikó

doi:10.1093/sysbio/syad025

Formalizing Invertebrate Morphological Data: A Descriptive Model for Cuticle-Based Skeleto-Muscular Systems, an Ontology for Insect Anatomy, and their Potential Applications in Biodiversity Research and Informatics

Jennifer C Girón, Sergei Tarasov, Luis Antonio González Montaña, Nicolas Matentzoglu, Aaron D Smith, Markus Koch, Brendon E Boudinot, Patrice Bouchard, Roger Burks, Lars Vogt, Matthew Yoder, David Osumi-Sutherland, Frank Friedrich, Rolf Beutel, István Mikó

Zoology Unit

Research output: Contribution to journal › Article › Scientific › peer-review

Original language	English
Journal	Systematic Biology
Volume	72
Issue number	5
Pages (from-to)	1084–1100
Number of pages	17
ISSN	1063-5157
DOIs	https://doi.org/10.1093/sysbio/syad025
Publication status	Published - Sept 2023
MoE publication type	A1 Journal article-refereed

Fields of Science

1181 Ecology, evolutionary biology
Arthropods
Hymenoptera
Expression
Homology

Access to Document

10.1093/sysbio/syad025

AISM-RevisedAccepted author manuscript, 1.68 MB

https://www.preprints.org/manuscript/202201.0254/v1

Reconstructing Evolutionary Dynamics of Phenomes: Integrating Phylogenetic Models and Ontologies
Tarasov, S. (Project manager), Losacco, F. (Participant), Montanaro, G. (Participant), Rossini, M. (Participant) & Sasso Porto, D. (Participant)
SUOMEN AKATEMIA Vähäkylä Leena
01/09/2021 → 31/12/2024
Project: Research Council of Finland: Academy Research Fellow's research expenses
Unrolling mechanisms of species diversifications using novel phylogenetic methods
Tarasov, S. (Project manager), Merrien, T. (Other), Cardoso, P. (Participant), Montanaro, G. (Participant), Losacco, F. (Participant), Vieira Lopes, F. R. (CoIlaborator) & Sasso Porto, D. (Participant)
01/01/2021 → 01/01/2024
Project: University of Helsinki Three-Year Research Project

Cite this

Girón, J. C., Tarasov, S., González Montaña, L. A., Matentzoglu, N., Smith, A. D., Koch, M., Boudinot, B. E., Bouchard, P., Burks, R., Vogt, L., Yoder, M., Osumi-Sutherland, D., Friedrich, F., Beutel, R., & Mikó, I. (2023). Formalizing Invertebrate Morphological Data: A Descriptive Model for Cuticle-Based Skeleto-Muscular Systems, an Ontology for Insect Anatomy, and their Potential Applications in Biodiversity Research and Informatics. Systematic Biology, 72(5), 1084–1100. https://doi.org/10.1093/sysbio/syad025

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title = "Formalizing Invertebrate Morphological Data: A Descriptive Model for Cuticle-Based Skeleto-Muscular Systems, an Ontology for Insect Anatomy, and their Potential Applications in Biodiversity Research and Informatics",

keywords = "1181 Ecology, evolutionary biology, Arthropods, Hymenoptera, Expression, Homology",

author = "Gir{\'o}n, {Jennifer C} and Sergei Tarasov and {Gonz{\'a}lez Monta{\~n}a}, {Luis Antonio} and Nicolas Matentzoglu and Smith, {Aaron D} and Markus Koch and Boudinot, {Brendon E} and Patrice Bouchard and Roger Burks and Lars Vogt and Matthew Yoder and David Osumi-Sutherland and Frank Friedrich and Rolf Beutel and Istv{\'a}n Mik{\'o}",

year = "2023",

month = sep,

doi = "10.1093/sysbio/syad025",

language = "English",

volume = "72",

pages = "1084–1100",

journal = "Systematic Biology",

issn = "1063-5157",

publisher = "Oxford University Press",

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Girón, JC, Tarasov, S, González Montaña, LA, Matentzoglu, N, Smith, AD, Koch, M, Boudinot, BE, Bouchard, P, Burks, R, Vogt, L, Yoder, M, Osumi-Sutherland, D, Friedrich, F, Beutel, R & Mikó, I 2023, 'Formalizing Invertebrate Morphological Data: A Descriptive Model for Cuticle-Based Skeleto-Muscular Systems, an Ontology for Insect Anatomy, and their Potential Applications in Biodiversity Research and Informatics', Systematic Biology, vol. 72, no. 5, pp. 1084–1100. https://doi.org/10.1093/sysbio/syad025

Formalizing Invertebrate Morphological Data: A Descriptive Model for Cuticle-Based Skeleto-Muscular Systems, an Ontology for Insect Anatomy, and their Potential Applications in Biodiversity Research and Informatics. / Girón, Jennifer C; Tarasov, Sergei; González Montaña, Luis Antonio et al.
In: Systematic Biology, Vol. 72, No. 5, 09.2023, p. 1084–1100.

Research output: Contribution to journal › Article › Scientific › peer-review

TY - JOUR

T1 - Formalizing Invertebrate Morphological Data

T2 - A Descriptive Model for Cuticle-Based Skeleto-Muscular Systems, an Ontology for Insect Anatomy, and their Potential Applications in Biodiversity Research and Informatics

AU - Girón, Jennifer C

AU - Tarasov, Sergei

AU - González Montaña, Luis Antonio

AU - Matentzoglu, Nicolas

AU - Smith, Aaron D

AU - Koch, Markus

AU - Boudinot, Brendon E

AU - Bouchard, Patrice

AU - Burks, Roger

AU - Vogt, Lars

AU - Yoder, Matthew

AU - Osumi-Sutherland, David

AU - Friedrich, Frank

AU - Beutel, Rolf

AU - Mikó, István

PY - 2023/9

Y1 - 2023/9

KW - 1181 Ecology, evolutionary biology

KW - Arthropods

KW - Hymenoptera

KW - Expression

KW - Homology

U2 - 10.1093/sysbio/syad025

DO - 10.1093/sysbio/syad025

M3 - Article

SN - 1063-5157

VL - 72

SP - 1084

EP - 1100

JO - Systematic Biology

JF - Systematic Biology

IS - 5

ER -

Girón JC, Tarasov S, González Montaña LA, Matentzoglu N, Smith AD, Koch M et al. Formalizing Invertebrate Morphological Data: A Descriptive Model for Cuticle-Based Skeleto-Muscular Systems, an Ontology for Insect Anatomy, and their Potential Applications in Biodiversity Research and Informatics. Systematic Biology. 2023 Sept;72(5):1084–1100. Epub 2023 Apr 24. doi: 10.1093/sysbio/syad025

Formalizing Invertebrate Morphological Data: A Descriptive Model for Cuticle-Based Skeleto-Muscular Systems, an Ontology for Insect Anatomy, and their Potential Applications in Biodiversity Research and Informatics

Fields of Science

Access to Document

Projects

Reconstructing Evolutionary Dynamics of Phenomes: Integrating Phylogenetic Models and Ontologies

Unrolling mechanisms of species diversifications using novel phylogenetic methods

Cite this