Gametophytic transcriptomics of an early embryophyte (Blasia pusilla) and comparative landscape of gametophyte evolution

Gaurav Sablok, Xiaolan He, Mari Miranto, Elina Peltomaa, Jorge Flores, Robin Sleith, Kenneth Karol, Charles Delwiche, Neil Bell, Lars Paulin, Péter Poczai, Jaakko Hyvönen

Research output: Conference materialsPosterResearchpeer-review

Abstract

Transcriptomics plays a central role in understanding the genetic underpinning of post-transcriptional regulation. In recent years, transcriptomics has not only acted as a model for unraveling post-transcriptional regulatory events but has also provided a basis for species-level comparative transcriptomics. In the absence of genomic data, transcriptomics not only allows for de-novo phylo-transcriptomics but also enables the detection of specific genes, which are specific to certain lineages or clades. We present the first reference gametophytic transcriptome of Blasia pusilla sequenced using Illumina Next-Seq with the aim of unravelling the gametophytic transcriptomics of an early embryophyte. We also highlight the role of transcriptomics in identifying early genes and possible phylogenetic pressures on ancestral gene evolution across embryophytes (land plants).
Original languageEnglish
Publication statusPublished - 26 Jun 2019
MoE publication typeNot Eligible
EventInternational Symposium on Frontiers in Molecular Science: RNA Regulatory Network - Lisbon, Portugal
Duration: 26 Jun 201928 Jun 2019
Conference number: 3

Conference

ConferenceInternational Symposium on Frontiers in Molecular Science
Abbreviated titleISFMS 2019
CountryPortugal
CityLisbon
Period26/06/201928/06/2019

Fields of Science

  • 1182 Biochemistry, cell and molecular biology

Cite this

Sablok, Gaurav ; He, Xiaolan ; Miranto, Mari ; Peltomaa, Elina ; Flores, Jorge ; Sleith, Robin ; Karol, Kenneth ; Delwiche, Charles ; Bell, Neil ; Paulin, Lars ; Poczai, Péter ; Hyvönen, Jaakko. / Gametophytic transcriptomics of an early embryophyte (Blasia pusilla) and comparative landscape of gametophyte evolution. Poster session presented at International Symposium on Frontiers in Molecular Science, Lisbon, Portugal.
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title = "Gametophytic transcriptomics of an early embryophyte (Blasia pusilla) and comparative landscape of gametophyte evolution",
abstract = "Transcriptomics plays a central role in understanding the genetic underpinning of post-transcriptional regulation. In recent years, transcriptomics has not only acted as a model for unraveling post-transcriptional regulatory events but has also provided a basis for species-level comparative transcriptomics. In the absence of genomic data, transcriptomics not only allows for de-novo phylo-transcriptomics but also enables the detection of specific genes, which are specific to certain lineages or clades. We present the first reference gametophytic transcriptome of Blasia pusilla sequenced using Illumina Next-Seq with the aim of unravelling the gametophytic transcriptomics of an early embryophyte. We also highlight the role of transcriptomics in identifying early genes and possible phylogenetic pressures on ancestral gene evolution across embryophytes (land plants).",
keywords = "1182 Biochemistry, cell and molecular biology",
author = "Gaurav Sablok and Xiaolan He and Mari Miranto and Elina Peltomaa and Jorge Flores and Robin Sleith and Kenneth Karol and Charles Delwiche and Neil Bell and Lars Paulin and P{\'e}ter Poczai and Jaakko Hyv{\"o}nen",
year = "2019",
month = "6",
day = "26",
language = "English",
note = "International Symposium on Frontiers in Molecular Science : RNA Regulatory Network, ISFMS 2019 ; Conference date: 26-06-2019 Through 28-06-2019",

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Sablok, G, He, X, Miranto, M, Peltomaa, E, Flores, J, Sleith, R, Karol, K, Delwiche, C, Bell, N, Paulin, L, Poczai, P & Hyvönen, J 2019, 'Gametophytic transcriptomics of an early embryophyte (Blasia pusilla) and comparative landscape of gametophyte evolution' International Symposium on Frontiers in Molecular Science, Lisbon, Portugal, 26/06/2019 - 28/06/2019, .

Gametophytic transcriptomics of an early embryophyte (Blasia pusilla) and comparative landscape of gametophyte evolution. / Sablok, Gaurav; He, Xiaolan; Miranto, Mari; Peltomaa, Elina; Flores, Jorge; Sleith, Robin; Karol, Kenneth; Delwiche, Charles; Bell, Neil; Paulin, Lars; Poczai, Péter; Hyvönen, Jaakko.

2019. Poster session presented at International Symposium on Frontiers in Molecular Science, Lisbon, Portugal.

Research output: Conference materialsPosterResearchpeer-review

TY - CONF

T1 - Gametophytic transcriptomics of an early embryophyte (Blasia pusilla) and comparative landscape of gametophyte evolution

AU - Sablok, Gaurav

AU - He, Xiaolan

AU - Miranto, Mari

AU - Peltomaa, Elina

AU - Flores, Jorge

AU - Sleith, Robin

AU - Karol, Kenneth

AU - Delwiche, Charles

AU - Bell, Neil

AU - Paulin, Lars

AU - Poczai, Péter

AU - Hyvönen, Jaakko

PY - 2019/6/26

Y1 - 2019/6/26

N2 - Transcriptomics plays a central role in understanding the genetic underpinning of post-transcriptional regulation. In recent years, transcriptomics has not only acted as a model for unraveling post-transcriptional regulatory events but has also provided a basis for species-level comparative transcriptomics. In the absence of genomic data, transcriptomics not only allows for de-novo phylo-transcriptomics but also enables the detection of specific genes, which are specific to certain lineages or clades. We present the first reference gametophytic transcriptome of Blasia pusilla sequenced using Illumina Next-Seq with the aim of unravelling the gametophytic transcriptomics of an early embryophyte. We also highlight the role of transcriptomics in identifying early genes and possible phylogenetic pressures on ancestral gene evolution across embryophytes (land plants).

AB - Transcriptomics plays a central role in understanding the genetic underpinning of post-transcriptional regulation. In recent years, transcriptomics has not only acted as a model for unraveling post-transcriptional regulatory events but has also provided a basis for species-level comparative transcriptomics. In the absence of genomic data, transcriptomics not only allows for de-novo phylo-transcriptomics but also enables the detection of specific genes, which are specific to certain lineages or clades. We present the first reference gametophytic transcriptome of Blasia pusilla sequenced using Illumina Next-Seq with the aim of unravelling the gametophytic transcriptomics of an early embryophyte. We also highlight the role of transcriptomics in identifying early genes and possible phylogenetic pressures on ancestral gene evolution across embryophytes (land plants).

KW - 1182 Biochemistry, cell and molecular biology

M3 - Poster

ER -

Sablok G, He X, Miranto M, Peltomaa E, Flores J, Sleith R et al. Gametophytic transcriptomics of an early embryophyte (Blasia pusilla) and comparative landscape of gametophyte evolution. 2019. Poster session presented at International Symposium on Frontiers in Molecular Science, Lisbon, Portugal.