Gap2Seq

Leena Maija Salmela; Kristoffer Sahlin; Veli Antti Tapani Mäkinen; Alexandru Ioan Tomescu

Gap2Seq

Leena Maija Salmela, Kristoffer Sahlin, Veli Antti Tapani Mäkinen, Alexandru Ioan Tomescu

Research output: Non-textual form › Software › Scientific

Abstract

Gap2Seq is a program for filling gaps in scaffolds produced by genome assembly tools using short read data such as reads produced by Illumina sequencing.

Original language	English
Publication status	Published - 2015
MoE publication type	I2 ICT software

Fields of Science

113 Computer and information sciences
Bioinformatics

Access to Document

http://www.cs.helsinki.fi/u/lmsalmel/Gap2Seq/

Cite this

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title = "Gap2Seq",

abstract = "Gap2Seq is a program for filling gaps in scaffolds produced by genome assembly tools using short read data such as reads produced by Illumina sequencing.",

keywords = "113 Computer and information sciences, Bioinformatics",

author = "Salmela, {Leena Maija} and Kristoffer Sahlin and M{\"a}kinen, {Veli Antti Tapani} and Tomescu, {Alexandru Ioan}",

year = "2015",

language = "English",

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TY - ADVS

T1 - Gap2Seq

AU - Salmela, Leena Maija

AU - Sahlin, Kristoffer

AU - Mäkinen, Veli Antti Tapani

AU - Tomescu, Alexandru Ioan

PY - 2015

Y1 - 2015

N2 - Gap2Seq is a program for filling gaps in scaffolds produced by genome assembly tools using short read data such as reads produced by Illumina sequencing.

AB - Gap2Seq is a program for filling gaps in scaffolds produced by genome assembly tools using short read data such as reads produced by Illumina sequencing.

KW - 113 Computer and information sciences

KW - Bioinformatics

M3 - Software

ER -