Genome sequencing and analysis of the model grass Brachypodium distachyon

John P. Vogel, David F. Garvin, Todd C. Mockler, Jeremy Schmutz, Dan Rokhsar, Michael W. Bevan, Kerrie Barry, Susan Lucas, Miranda Harmon-Smoth, Kathleen Lail, Hope Tice, Jane Grimwood, Neil McKenzie, Naxin Huo, Yong Q Gu, Gerard R. Lazo, Olin D. Anderson, Frank M. You, Ming-Cheng Luo, Jan Dvorak & 116 others Jan Wright, Melanie Febrer, Dominika Idziak, Robert Hasterok, Erika Lindquist, Mei Wang, Samuel E. Fox, Henry D. Priest, Sergei A. Filichkin, Scott A. Givan, Douglas W. Bryant, Jeff H. Chang, Haiyan Wu, Wei Wu, An-Ping Hsia, Patrick S. Schnable, Anantharaman Kalyanaraman, Brad Baarbazuk, Todd P. Michael, Samuel P. Hazen, Jennifer N. Bragg, Debbie Laudencia-Chingcuanco, Yiqun Weng, Georg Haberer, Mianuel Spannagl, Klaus Mayer, Thomas Rattei, Therese Mitros, Sang-Jik Lee, Jocelyn K. C. Rose, Lukas A. Mueller, Thomas L. York, Thomas Wicker, Jan P. Buchmann, Jaakko Tanskanen, Alan H. Schulman, Heidrun Gundlach, Antonio Costa de Oliveira, Luciano da C. Maia, William Belknap, Ning Jiang, Jinsheng Lai, Liucun Zhu, Jianxin Ma, Cheng Sun, Ellen Pritham, Jerome Salse, Florent Murat, Michael Abrouk, Remy Bruggmann, Joachim Messing, Noah Fahlgren, Christopher M. Sullivan, James C. Carrington, Elisabeth J. Chapman, Greg D. May, Jixian Zhai, Matthias Ganssmann, Sai Guna Ranjan Gurazada, Marcelo German, Blake C. Meyers, Pamela J. Green, Ludmila Tyler, Jiajie Wu, James Thomson, Shan Chen, Henrik V. Scheller, Jesper Harholt, Peter Ulvskov, Jeffrey A. Kimbrel, Laura E. Bartley, Peijian Cao, Ki-Hong Jung, Manoj K. Sharma, Miguel Vega-Sanchez, Pamela Ronald, Christopher D. Dardick, Stefanie De Bodt, Wim Verelst, Dirk Inze, Maren Heese, Arp Schnittger, Xiaohan Yang, Udaya C. Kalluri, Gerald A. Tuskan, Zhihua Hua, Richard D. Vierstra, Yu Cui, Shuhong Ouyang, Qixin Sun, Zhiyong Liu, Alper Yilmaz, Erich Grotewold, Richard Sibout, Kian Hematy, Gregory Mouille, Herman Hoefte, Jerome Pelloux, Devin O'Connor, James Schbnable, Scott Rowe, Frank Harmon, Cynthia L. Cass, John C. Sedbrook, Mary E. Byrne, Sean Walsh, Janet Higgins, Pinghua Li, Thomas Brutnell, Turgay Unver, Hikmet Budak, Harry Belcram, Mathieu Charles, Boulos Chalhoub, Ivan Baxter, Int Brachypodium Initiative

Research output: Contribution to journalArticleScientificpeer-review

Original languageEnglish
JournalNature
Volume463
Issue number7282
Pages (from-to)763-768
Number of pages6
ISSN0028-0836
DOIs
Publication statusPublished - 2010
MoE publication typeA1 Journal article-refereed

Fields of Science

  • AGROBACTERIUM-MEDIATED TRANSFORMATION
  • INTRASPECIES DIVERSITY
  • RICE
  • EVOLUTION
  • WHEAT
  • MAP
  • ARABIDOPSIS
  • DIVERGENCE
  • TRITICEAE
  • RETROTRANSPOSONS
  • 118 Biological sciences

Cite this

Vogel, J. P., Garvin, D. F., Mockler, T. C., Schmutz, J., Rokhsar, D., Bevan, M. W., ... Int Brachypodium Initiative (2010). Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature, 463(7282), 763-768. https://doi.org/10.1038/nature08747
Vogel, John P. ; Garvin, David F. ; Mockler, Todd C. ; Schmutz, Jeremy ; Rokhsar, Dan ; Bevan, Michael W. ; Barry, Kerrie ; Lucas, Susan ; Harmon-Smoth, Miranda ; Lail, Kathleen ; Tice, Hope ; Grimwood, Jane ; McKenzie, Neil ; Huo, Naxin ; Gu, Yong Q ; Lazo, Gerard R. ; Anderson, Olin D. ; You, Frank M. ; Luo, Ming-Cheng ; Dvorak, Jan ; Wright, Jan ; Febrer, Melanie ; Idziak, Dominika ; Hasterok, Robert ; Lindquist, Erika ; Wang, Mei ; Fox, Samuel E. ; Priest, Henry D. ; Filichkin, Sergei A. ; Givan, Scott A. ; Bryant, Douglas W. ; Chang, Jeff H. ; Wu, Haiyan ; Wu, Wei ; Hsia, An-Ping ; Schnable, Patrick S. ; Kalyanaraman, Anantharaman ; Baarbazuk, Brad ; Michael, Todd P. ; Hazen, Samuel P. ; Bragg, Jennifer N. ; Laudencia-Chingcuanco, Debbie ; Weng, Yiqun ; Haberer, Georg ; Spannagl, Mianuel ; Mayer, Klaus ; Rattei, Thomas ; Mitros, Therese ; Lee, Sang-Jik ; Rose, Jocelyn K. C. ; Mueller, Lukas A. ; York, Thomas L. ; Wicker, Thomas ; Buchmann, Jan P. ; Tanskanen, Jaakko ; Schulman, Alan H. ; Gundlach, Heidrun ; de Oliveira, Antonio Costa ; Maia, Luciano da C. ; Belknap, William ; Jiang, Ning ; Lai, Jinsheng ; Zhu, Liucun ; Ma, Jianxin ; Sun, Cheng ; Pritham, Ellen ; Salse, Jerome ; Murat, Florent ; Abrouk, Michael ; Bruggmann, Remy ; Messing, Joachim ; Fahlgren, Noah ; Sullivan, Christopher M. ; Carrington, James C. ; Chapman, Elisabeth J. ; May, Greg D. ; Zhai, Jixian ; Ganssmann, Matthias ; Gurazada, Sai Guna Ranjan ; German, Marcelo ; Meyers, Blake C. ; Green, Pamela J. ; Tyler, Ludmila ; Wu, Jiajie ; Thomson, James ; Chen, Shan ; Scheller, Henrik V. ; Harholt, Jesper ; Ulvskov, Peter ; Kimbrel, Jeffrey A. ; Bartley, Laura E. ; Cao, Peijian ; Jung, Ki-Hong ; Sharma, Manoj K. ; Vega-Sanchez, Miguel ; Ronald, Pamela ; Dardick, Christopher D. ; De Bodt, Stefanie ; Verelst, Wim ; Inze, Dirk ; Heese, Maren ; Schnittger, Arp ; Yang, Xiaohan ; Kalluri, Udaya C. ; Tuskan, Gerald A. ; Hua, Zhihua ; Vierstra, Richard D. ; Cui, Yu ; Ouyang, Shuhong ; Sun, Qixin ; Liu, Zhiyong ; Yilmaz, Alper ; Grotewold, Erich ; Sibout, Richard ; Hematy, Kian ; Mouille, Gregory ; Hoefte, Herman ; Pelloux, Jerome ; O'Connor, Devin ; Schbnable, James ; Rowe, Scott ; Harmon, Frank ; Cass, Cynthia L. ; Sedbrook, John C. ; Byrne, Mary E. ; Walsh, Sean ; Higgins, Janet ; Li, Pinghua ; Brutnell, Thomas ; Unver, Turgay ; Budak, Hikmet ; Belcram, Harry ; Charles, Mathieu ; Chalhoub, Boulos ; Baxter, Ivan ; Int Brachypodium Initiative. / Genome sequencing and analysis of the model grass Brachypodium distachyon. In: Nature. 2010 ; Vol. 463, No. 7282. pp. 763-768.
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title = "Genome sequencing and analysis of the model grass Brachypodium distachyon",
keywords = "AGROBACTERIUM-MEDIATED TRANSFORMATION, INTRASPECIES DIVERSITY, RICE, EVOLUTION, WHEAT, MAP, ARABIDOPSIS, DIVERGENCE, TRITICEAE, RETROTRANSPOSONS, 118 Biological sciences",
author = "Vogel, {John P.} and Garvin, {David F.} and Mockler, {Todd C.} and Jeremy Schmutz and Dan Rokhsar and Bevan, {Michael W.} and Kerrie Barry and Susan Lucas and Miranda Harmon-Smoth and Kathleen Lail and Hope Tice and Jane Grimwood and Neil McKenzie and Naxin Huo and Gu, {Yong Q} and Lazo, {Gerard R.} and Anderson, {Olin D.} and You, {Frank M.} and Ming-Cheng Luo and Jan Dvorak and Jan Wright and Melanie Febrer and Dominika Idziak and Robert Hasterok and Erika Lindquist and Mei Wang and Fox, {Samuel E.} and Priest, {Henry D.} and Filichkin, {Sergei A.} and Givan, {Scott A.} and Bryant, {Douglas W.} and Chang, {Jeff H.} and Haiyan Wu and Wei Wu and An-Ping Hsia and Schnable, {Patrick S.} and Anantharaman Kalyanaraman and Brad Baarbazuk and Michael, {Todd P.} and Hazen, {Samuel P.} and Bragg, {Jennifer N.} and Debbie Laudencia-Chingcuanco and Yiqun Weng and Georg Haberer and Mianuel Spannagl and Klaus Mayer and Thomas Rattei and Therese Mitros and Sang-Jik Lee and Rose, {Jocelyn K. C.} and Mueller, {Lukas A.} and York, {Thomas L.} and Thomas Wicker and Buchmann, {Jan P.} and Jaakko Tanskanen and Schulman, {Alan H.} and Heidrun Gundlach and {de Oliveira}, {Antonio Costa} and Maia, {Luciano da C.} and William Belknap and Ning Jiang and Jinsheng Lai and Liucun Zhu and Jianxin Ma and Cheng Sun and Ellen Pritham and Jerome Salse and Florent Murat and Michael Abrouk and Remy Bruggmann and Joachim Messing and Noah Fahlgren and Sullivan, {Christopher M.} and Carrington, {James C.} and Chapman, {Elisabeth J.} and May, {Greg D.} and Jixian Zhai and Matthias Ganssmann and Gurazada, {Sai Guna Ranjan} and Marcelo German and Meyers, {Blake C.} and Green, {Pamela J.} and Ludmila Tyler and Jiajie Wu and James Thomson and Shan Chen and Scheller, {Henrik V.} and Jesper Harholt and Peter Ulvskov and Kimbrel, {Jeffrey A.} and Bartley, {Laura E.} and Peijian Cao and Ki-Hong Jung and Sharma, {Manoj K.} and Miguel Vega-Sanchez and Pamela Ronald and Dardick, {Christopher D.} and {De Bodt}, Stefanie and Wim Verelst and Dirk Inze and Maren Heese and Arp Schnittger and Xiaohan Yang and Kalluri, {Udaya C.} and Tuskan, {Gerald A.} and Zhihua Hua and Vierstra, {Richard D.} and Yu Cui and Shuhong Ouyang and Qixin Sun and Zhiyong Liu and Alper Yilmaz and Erich Grotewold and Richard Sibout and Kian Hematy and Gregory Mouille and Herman Hoefte and Jerome Pelloux and Devin O'Connor and James Schbnable and Scott Rowe and Frank Harmon and Cass, {Cynthia L.} and Sedbrook, {John C.} and Byrne, {Mary E.} and Sean Walsh and Janet Higgins and Pinghua Li and Thomas Brutnell and Turgay Unver and Hikmet Budak and Harry Belcram and Mathieu Charles and Boulos Chalhoub and Ivan Baxter and {Int Brachypodium Initiative}",
year = "2010",
doi = "10.1038/nature08747",
language = "English",
volume = "463",
pages = "763--768",
journal = "Nature",
issn = "0028-0836",
publisher = "Nature Publishing Group",
number = "7282",

}

Vogel, JP, Garvin, DF, Mockler, TC, Schmutz, J, Rokhsar, D, Bevan, MW, Barry, K, Lucas, S, Harmon-Smoth, M, Lail, K, Tice, H, Grimwood, J, McKenzie, N, Huo, N, Gu, YQ, Lazo, GR, Anderson, OD, You, FM, Luo, M-C, Dvorak, J, Wright, J, Febrer, M, Idziak, D, Hasterok, R, Lindquist, E, Wang, M, Fox, SE, Priest, HD, Filichkin, SA, Givan, SA, Bryant, DW, Chang, JH, Wu, H, Wu, W, Hsia, A-P, Schnable, PS, Kalyanaraman, A, Baarbazuk, B, Michael, TP, Hazen, SP, Bragg, JN, Laudencia-Chingcuanco, D, Weng, Y, Haberer, G, Spannagl, M, Mayer, K, Rattei, T, Mitros, T, Lee, S-J, Rose, JKC, Mueller, LA, York, TL, Wicker, T, Buchmann, JP, Tanskanen, J, Schulman, AH, Gundlach, H, de Oliveira, AC, Maia, LDC, Belknap, W, Jiang, N, Lai, J, Zhu, L, Ma, J, Sun, C, Pritham, E, Salse, J, Murat, F, Abrouk, M, Bruggmann, R, Messing, J, Fahlgren, N, Sullivan, CM, Carrington, JC, Chapman, EJ, May, GD, Zhai, J, Ganssmann, M, Gurazada, SGR, German, M, Meyers, BC, Green, PJ, Tyler, L, Wu, J, Thomson, J, Chen, S, Scheller, HV, Harholt, J, Ulvskov, P, Kimbrel, JA, Bartley, LE, Cao, P, Jung, K-H, Sharma, MK, Vega-Sanchez, M, Ronald, P, Dardick, CD, De Bodt, S, Verelst, W, Inze, D, Heese, M, Schnittger, A, Yang, X, Kalluri, UC, Tuskan, GA, Hua, Z, Vierstra, RD, Cui, Y, Ouyang, S, Sun, Q, Liu, Z, Yilmaz, A, Grotewold, E, Sibout, R, Hematy, K, Mouille, G, Hoefte, H, Pelloux, J, O'Connor, D, Schbnable, J, Rowe, S, Harmon, F, Cass, CL, Sedbrook, JC, Byrne, ME, Walsh, S, Higgins, J, Li, P, Brutnell, T, Unver, T, Budak, H, Belcram, H, Charles, M, Chalhoub, B, Baxter, I & Int Brachypodium Initiative 2010, 'Genome sequencing and analysis of the model grass Brachypodium distachyon', Nature, vol. 463, no. 7282, pp. 763-768. https://doi.org/10.1038/nature08747

Genome sequencing and analysis of the model grass Brachypodium distachyon. / Vogel, John P.; Garvin, David F.; Mockler, Todd C.; Schmutz, Jeremy; Rokhsar, Dan; Bevan, Michael W.; Barry, Kerrie; Lucas, Susan; Harmon-Smoth, Miranda; Lail, Kathleen; Tice, Hope; Grimwood, Jane; McKenzie, Neil; Huo, Naxin; Gu, Yong Q; Lazo, Gerard R.; Anderson, Olin D.; You, Frank M.; Luo, Ming-Cheng; Dvorak, Jan; Wright, Jan; Febrer, Melanie; Idziak, Dominika; Hasterok, Robert; Lindquist, Erika; Wang, Mei; Fox, Samuel E.; Priest, Henry D.; Filichkin, Sergei A.; Givan, Scott A.; Bryant, Douglas W.; Chang, Jeff H.; Wu, Haiyan; Wu, Wei; Hsia, An-Ping; Schnable, Patrick S.; Kalyanaraman, Anantharaman; Baarbazuk, Brad; Michael, Todd P.; Hazen, Samuel P.; Bragg, Jennifer N.; Laudencia-Chingcuanco, Debbie; Weng, Yiqun; Haberer, Georg; Spannagl, Mianuel; Mayer, Klaus; Rattei, Thomas; Mitros, Therese; Lee, Sang-Jik; Rose, Jocelyn K. C.; Mueller, Lukas A.; York, Thomas L.; Wicker, Thomas; Buchmann, Jan P.; Tanskanen, Jaakko; Schulman, Alan H.; Gundlach, Heidrun; de Oliveira, Antonio Costa; Maia, Luciano da C.; Belknap, William; Jiang, Ning; Lai, Jinsheng; Zhu, Liucun; Ma, Jianxin; Sun, Cheng; Pritham, Ellen; Salse, Jerome; Murat, Florent; Abrouk, Michael; Bruggmann, Remy; Messing, Joachim; Fahlgren, Noah; Sullivan, Christopher M.; Carrington, James C.; Chapman, Elisabeth J.; May, Greg D.; Zhai, Jixian; Ganssmann, Matthias; Gurazada, Sai Guna Ranjan; German, Marcelo; Meyers, Blake C.; Green, Pamela J.; Tyler, Ludmila; Wu, Jiajie; Thomson, James; Chen, Shan; Scheller, Henrik V.; Harholt, Jesper; Ulvskov, Peter; Kimbrel, Jeffrey A.; Bartley, Laura E.; Cao, Peijian; Jung, Ki-Hong; Sharma, Manoj K.; Vega-Sanchez, Miguel; Ronald, Pamela; Dardick, Christopher D.; De Bodt, Stefanie; Verelst, Wim; Inze, Dirk; Heese, Maren; Schnittger, Arp; Yang, Xiaohan; Kalluri, Udaya C.; Tuskan, Gerald A.; Hua, Zhihua; Vierstra, Richard D.; Cui, Yu; Ouyang, Shuhong; Sun, Qixin; Liu, Zhiyong; Yilmaz, Alper; Grotewold, Erich; Sibout, Richard; Hematy, Kian; Mouille, Gregory; Hoefte, Herman; Pelloux, Jerome; O'Connor, Devin; Schbnable, James; Rowe, Scott; Harmon, Frank; Cass, Cynthia L.; Sedbrook, John C.; Byrne, Mary E.; Walsh, Sean; Higgins, Janet; Li, Pinghua; Brutnell, Thomas; Unver, Turgay; Budak, Hikmet; Belcram, Harry; Charles, Mathieu; Chalhoub, Boulos; Baxter, Ivan; Int Brachypodium Initiative.

In: Nature, Vol. 463, No. 7282, 2010, p. 763-768.

Research output: Contribution to journalArticleScientificpeer-review

TY - JOUR

T1 - Genome sequencing and analysis of the model grass Brachypodium distachyon

AU - Vogel, John P.

AU - Garvin, David F.

AU - Mockler, Todd C.

AU - Schmutz, Jeremy

AU - Rokhsar, Dan

AU - Bevan, Michael W.

AU - Barry, Kerrie

AU - Lucas, Susan

AU - Harmon-Smoth, Miranda

AU - Lail, Kathleen

AU - Tice, Hope

AU - Grimwood, Jane

AU - McKenzie, Neil

AU - Huo, Naxin

AU - Gu, Yong Q

AU - Lazo, Gerard R.

AU - Anderson, Olin D.

AU - You, Frank M.

AU - Luo, Ming-Cheng

AU - Dvorak, Jan

AU - Wright, Jan

AU - Febrer, Melanie

AU - Idziak, Dominika

AU - Hasterok, Robert

AU - Lindquist, Erika

AU - Wang, Mei

AU - Fox, Samuel E.

AU - Priest, Henry D.

AU - Filichkin, Sergei A.

AU - Givan, Scott A.

AU - Bryant, Douglas W.

AU - Chang, Jeff H.

AU - Wu, Haiyan

AU - Wu, Wei

AU - Hsia, An-Ping

AU - Schnable, Patrick S.

AU - Kalyanaraman, Anantharaman

AU - Baarbazuk, Brad

AU - Michael, Todd P.

AU - Hazen, Samuel P.

AU - Bragg, Jennifer N.

AU - Laudencia-Chingcuanco, Debbie

AU - Weng, Yiqun

AU - Haberer, Georg

AU - Spannagl, Mianuel

AU - Mayer, Klaus

AU - Rattei, Thomas

AU - Mitros, Therese

AU - Lee, Sang-Jik

AU - Rose, Jocelyn K. C.

AU - Mueller, Lukas A.

AU - York, Thomas L.

AU - Wicker, Thomas

AU - Buchmann, Jan P.

AU - Tanskanen, Jaakko

AU - Schulman, Alan H.

AU - Gundlach, Heidrun

AU - de Oliveira, Antonio Costa

AU - Maia, Luciano da C.

AU - Belknap, William

AU - Jiang, Ning

AU - Lai, Jinsheng

AU - Zhu, Liucun

AU - Ma, Jianxin

AU - Sun, Cheng

AU - Pritham, Ellen

AU - Salse, Jerome

AU - Murat, Florent

AU - Abrouk, Michael

AU - Bruggmann, Remy

AU - Messing, Joachim

AU - Fahlgren, Noah

AU - Sullivan, Christopher M.

AU - Carrington, James C.

AU - Chapman, Elisabeth J.

AU - May, Greg D.

AU - Zhai, Jixian

AU - Ganssmann, Matthias

AU - Gurazada, Sai Guna Ranjan

AU - German, Marcelo

AU - Meyers, Blake C.

AU - Green, Pamela J.

AU - Tyler, Ludmila

AU - Wu, Jiajie

AU - Thomson, James

AU - Chen, Shan

AU - Scheller, Henrik V.

AU - Harholt, Jesper

AU - Ulvskov, Peter

AU - Kimbrel, Jeffrey A.

AU - Bartley, Laura E.

AU - Cao, Peijian

AU - Jung, Ki-Hong

AU - Sharma, Manoj K.

AU - Vega-Sanchez, Miguel

AU - Ronald, Pamela

AU - Dardick, Christopher D.

AU - De Bodt, Stefanie

AU - Verelst, Wim

AU - Inze, Dirk

AU - Heese, Maren

AU - Schnittger, Arp

AU - Yang, Xiaohan

AU - Kalluri, Udaya C.

AU - Tuskan, Gerald A.

AU - Hua, Zhihua

AU - Vierstra, Richard D.

AU - Cui, Yu

AU - Ouyang, Shuhong

AU - Sun, Qixin

AU - Liu, Zhiyong

AU - Yilmaz, Alper

AU - Grotewold, Erich

AU - Sibout, Richard

AU - Hematy, Kian

AU - Mouille, Gregory

AU - Hoefte, Herman

AU - Pelloux, Jerome

AU - O'Connor, Devin

AU - Schbnable, James

AU - Rowe, Scott

AU - Harmon, Frank

AU - Cass, Cynthia L.

AU - Sedbrook, John C.

AU - Byrne, Mary E.

AU - Walsh, Sean

AU - Higgins, Janet

AU - Li, Pinghua

AU - Brutnell, Thomas

AU - Unver, Turgay

AU - Budak, Hikmet

AU - Belcram, Harry

AU - Charles, Mathieu

AU - Chalhoub, Boulos

AU - Baxter, Ivan

AU - Int Brachypodium Initiative

PY - 2010

Y1 - 2010

KW - AGROBACTERIUM-MEDIATED TRANSFORMATION

KW - INTRASPECIES DIVERSITY

KW - RICE

KW - EVOLUTION

KW - WHEAT

KW - MAP

KW - ARABIDOPSIS

KW - DIVERGENCE

KW - TRITICEAE

KW - RETROTRANSPOSONS

KW - 118 Biological sciences

U2 - 10.1038/nature08747

DO - 10.1038/nature08747

M3 - Article

VL - 463

SP - 763

EP - 768

JO - Nature

JF - Nature

SN - 0028-0836

IS - 7282

ER -

Vogel JP, Garvin DF, Mockler TC, Schmutz J, Rokhsar D, Bevan MW et al. Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature. 2010;463(7282):763-768. https://doi.org/10.1038/nature08747